Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G15650 LG-5 - View
Acer truncatum Atru.BG.135.p chr2 + View
Acer truncatum Atru.chr4.2783 chr4 - View
Actinidia chinensis Actinidia23635 Lachesis_group0 + View
Arabidopsis lyrata AL3G15680 scaffold_3 - View
Avicennia marina MSTRG.24784 ScioBoG_4088_HRSCAF_4107 - View
Amaranthus hybridus Ah.06g189380 Pentatricopeptide repeat-containing protein At3g05340 AmaHy_arrow1_Scaffold_6 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.N2G7N8 PF00226 - DnaJ domain (DnaJ) arahy.Tifrunner.gnm1.Arahy.16 - View
Arabidopsis thaliana AT3G62890 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%2C Tetratricopeptide-like helical (InterPro:IPR011990)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT5G40405.1)%3B Has 35241 Blast hits to 13566 proteins in 229 species: Archae - 0%3B Bacteria - 18%3B Metazoa - 37%3B Fungi - 30%3B Plants - 34726%3B Viruses - 0%3B Other Eukaryotes - 430 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT3G05240 mitochondrial editing factor 19 Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing. mitochondrial editing factor 19 (MEF19)%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: SLOW GROWTH 1 (TAIR:AT2G22410.1)%3B Has 38600 Blast hits to 13827 proteins in 232 species: Archae - 0%3B Bacteria - 10%3B Metazoa - 58%3B Fungi - 134%3B Plants - 37910%3B Viruses - 0%3B Other Eukaryotes - 488 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC07g38456 ChrC07 - View
Brassica napus C08p12270 C08 - View
Brassica napus A05p42810 A05 + View
Brassica napus C05p62530 C05 + View
Brassica napus C05p61860 C05 + View
Brassica napus A05p42280 A05 + View
Brassica oleracea BolC5t34846H C5 + View
Brassica rapa BraA05t23017Z A05 - View
Brassica rapa BraA05t22971Z A05 - View
Beta vulgaris EL10Ac4g09353 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr4_EL10_PGA_scaffold1 - View
Camellia sinensis var. sinensis CSS0029849 hypothetical protein POPTR_0013s02200g [Populus trichocarpa] Chr3 + View
Camellia sinensis var. sinensis CSS0044047 PREDICTED: pentatricopeptide repeat-containing protein At4g15720 [Vitis vinifera] Chr9 - View
Cannabis sativa CANSAT25G2779 NC_044370.1 - View
Cicer arietinum L. Ca_09356_v3 Ca_LG3_v3 - View
Corylus avellana Haze_01232 Similar to PCMP-H1: Pentatricopeptide repeat-containing protein At4g15720 (Arabidopsis thaliana OX%3D3702) 1 + View
Corylus avellana Haze_04195 Similar to PCMP-E83: Pentatricopeptide repeat-containing protein At3g05340 (Arabidopsis thaliana OX%3D3702) 2 + View
Citrus clementina Ciclev10002196m.g scaffold_5 - View
Ceratophyllum demersum CDE12G0165 10 + View
Cardamine hirsuta CARHR079580 Pentatricopeptide repeat-containing protein Chr3 - View
Carya illinoinensis CiPaw.07G017900 PF00226 - DnaJ domain (DnaJ) Chr07 - View
Citrullus lanatus ClCG03G017020 Pentatricopeptide repeat-containing protein CG_Chr03 + View
Citrullus lanatus ClCG02G015780 Pentatricopeptide repeat-containing protein CG_Chr02 + View
Cucumis melo MELO3C015316.2 Pentatricopeptide repeat-containing protein chr02 - View
Cucumis melo MELO3C031316.2 pentatricopeptide repeat-containing protein At3g05340 chr05 + View
Carica papaya Cpa.g.sc48.55 supercontig_48 - View
Chenopodium quinoa AUR62000826 PCMP-E83: Pentatricopeptide repeat-containing protein At3g05340 C_Quinoa_Scaffold_2088 + View
Cucumis sativus L. CsaV3_2G005310 Chaperone protein DnaJ chr2 - View
Daucus carota DCAR_030552 hypothetical protein DCARv2_Chr9 + View
Daucus carota DCAR_012397 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv40288 GWHABJS00000005 + View
Davidia involucrata Dinv33029 GWHABJS00000010 - View
Durio zibethinus Duzib138G1633 NW_019167893.1 + View
Durio zibethinus Duzib177G1137 NW_019168004.1 - View
Erigeron canadensis ECA236G4580 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.H04487 Chr08 - View
Eucalyptus grandis Eucgr.B01968 Chr02 + View
Erythranthe guttata Migut.N02060 scaffold_14 - View
Erythranthe guttata Migut.N00112 scaffold_14 + View
Erythranthe guttata Migut.B01034 scaffold_2 + View
Eutrema salsugineum Thhalv10006495m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_19 - View
Eutrema salsugineum Thhalv10020234m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_13 + View
Fragaria x ananassa FAN14G2480 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-1 + View
Fragaria x ananassa FAN05G0772 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-3 + View
Fragaria x ananassa FAN09G4350 PF00069//PF01535//PF07728//PF08263//PF13041//PF13855 - Protein kinase domain (Pkinase) // PPR repeat (PPR) // AAA domain (dynein-related subfamily) (AAA_5) // Leucine rich repeat N-terminal domain (LRRNT_2) // PPR repeat family (PPR_2) // Leucine rich repeat (LRR_8) Fvb6-2 + View
Fragaria x ananassa FAN14G4569 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-1 + View
Fragaria x ananassa FAN02G0931 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-4 - View
Fragaria vesca FvH4_6g05570 K19090 - CRISPR-associated protein Cas5t (cas5t) Fvb6 - View
Gossypium hirsutum Gohir.A11G265100 PF00226//PF13459 - DnaJ domain (DnaJ) // 4Fe-4S single cluster domain (Fer4_15) A11 - View
Gossypium hirsutum Gohir.A13G107500 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) A13 - View
Gossypium hirsutum Gohir.D11G275300 PF00226//PF13459 - DnaJ domain (DnaJ) // 4Fe-4S single cluster domain (Fer4_15) D11 - View
Glycine max Glyma.19G236302 PF13041 - PPR repeat family (PPR_2) Gm19 + View
Glycine max Glyma.03G237900 PF00226//PF13459 - DnaJ domain (DnaJ) // 4Fe-4S single cluster domain (Fer4_15) Gm03 - View
Glycine max Glyma.07G249400 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm07 + View
Gossypium raimondii Gorai.007G297100 Chr07 - View
Gossypium raimondii Gorai.013G124000 Chr13 - View
Lupinus albus Lalb_Chr18g0045641 PF00226 - DnaJ domain (DnaJ) Lalb_Chr18 + View
Lupinus albus Lalb_Chr15g0077181 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lalb_Chr15 - View
Lotus japonicus Lj1g0015045 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr1 - View
Lonicera japonica Lj7P471T21 GWHAAZE00000007 + View
Lonicera japonica Lj5C471T0 GWHAAZE00000005 - View
Lactuca sativa Lsat_1_v5_gn_9_86021 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Lsat_1_v8_lg_9 - View
Magnolia biondii MBI07_g35981_MAGBIO AED:0.03 Chr07 + View
Malus domestica MD16G1172100 Tetratricopeptide repeat (TPR)-like superfamily protein Chr16 + View
Malus domestica MD12G1219000 Tetratricopeptide repeat (TPR)-like superfamily protein Chr12 + View
Manihot esculenta Manes.09G167201 Chromosome09 - View
Manihot esculenta Manes.01G216300 Chromosome01 - View
Manihot esculenta Manes.15G014100 Chromosome15 + View
Medicago truncatula Medtr7g113530 chaperone protein DnaJ chr7 - View
Petunia axillaris Peaxi162Scf00037g00041 Peaxi162Scf00037 - View
Punica granatum PGR031G2956 NC_045127.1 + View
Prunus persica Prupe.1G138900 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp01 + View
Prunus persica Prupe.6G325500 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Pp06 + View
Pisum sativum Psat3g010960 DnaJ domain chr3LG5 - View
Populus trichocarpa Potri.014G132100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr14 + View
Populus trichocarpa Potri.013G021000 PF00226//PF13459 - DnaJ domain (DnaJ) // 4Fe-4S single cluster domain (Fer4_15) Chr13 - View
Phaseolus vulgaris Phvul.003G103200 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr03 + View
Phaseolus vulgaris Phvul.006G091900 PF00226 - DnaJ domain (DnaJ) Chr06 - View
Rosa chinensis RcHm_v2.0_Chr3g0454351 RcHm_v2.0_Chr3 - View
Salix brachista Sabra13G0023400 GWHAAZH00000013 - View
Salix brachista Sabra05G0036400 GWHAAZH00000005 + View
Salix brachista Sabra14G0098300 GWHAAZH00000014 + View
Sechium edule Sed0027835 LG08 - View
Sapria himalayana SHI18141 scaffold26_7557582 + View
Solanum lycopersicum Solyc01g099000.1 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A1U8DU99_CAPAN) SL4.0ch01 - View
Schrenkiella parvula Sp3g04090 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch3-1 - View
Solanum pennellii Sopen01g042570 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch01 - View
Solanum pennellii Sopen00g008750 Encodes a chloroplast RNA editing factor. | ORGANELLE TRANSCRIPT PROCESSING 81 (OTP81) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch00 - View
Solanum tuberosum PGSC0003DMG400024697 Pentatricopeptide repeat-containing protein ST4.03ch01 + View
Selenicereus undatus Hund07071 Scaffold_33676 - View
Trochodendron aralioides TAR362G1347 group17 + View
Trochodendron aralioides TAR362G0463 group17 - View
Trochodendron aralioides TAR633G0030 group2 + View
Theobroma cacao Thecc.05G303000 Chromosome_5 + View
Tarenaya hassleriana THA.LOC104818682 putative pentatricopeptide repeat-containing protein At3g05240 NW_010966177.1 - View
Tarenaya hassleriana THA.LOC104805819 pentatricopeptide repeat-containing protein At3g18970 NW_010961290.1 - View
Trifolium pratense TPR.G33241 Tp57577_TGAC_v2_LG6 - View
Tripterygium wilfordii TWI12G0446 NC_052243.1 - View
Tripterygium wilfordii TWI53G1295 NC_052244.1 - View
Vigna mungo VMungo0540G0139 CM024075.1 + View
Vitis vinifera GSVIVG01000034001 chr14 - View
Zea mays Zm00001eb394670 Zm00001e038200 Nascent polypeptide-associated complex alpha subunit-like protein 9 - View