Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold73G24266 scaffold73 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G2080 LG-10 + View
Aethionema arabicum Aa31LG8G2580 LG-8 + View
Actinidia chinensis Actinidia18766 Lachesis_group9 + View
Actinidia chinensis Actinidia35251 Lachesis_group2 + View
Actinidia chinensis Actinidia09683 Lachesis_group5 - View
Actinidia chinensis Actinidia01880 Lachesis_group0 + View
Arabidopsis lyrata AL1G61360 scaffold_1 - View
Arabidopsis lyrata AL3G27830 scaffold_3 + View
Avicennia marina MSTRG.14359 ScioBoG_18782_HRSCAF_18867 + View
Avicennia marina MSTRG.15228 ScioBoG_19538_HRSCAF_19626 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.87L2S9 PTHR24067:SF100 - UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.18 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5LQY74 PTHR24067:SF100 - UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN-RELATED arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT1G53023 Ubiquitin-conjugating enzyme family protein Ubiquitin-conjugating enzyme family protein%3B FUNCTIONS IN: small conjugating protein ligase activity%3B INVOLVED IN: regulation of protein metabolic process%2C post-translational protein modification%3B CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135)%2C Ubiquitin-conjugating enzyme%2C E2 (InterPro:IPR000608)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT1G53025.1). Chr1 - View
Arabidopsis thaliana AT3G15355 ubiquitin-conjugating enzyme 25 ubiquitin-conjugating enzyme 25 (UBC25)%3B FUNCTIONS IN: small conjugating protein ligase activity%3B INVOLVED IN: regulation of protein metabolic process%2C post-translational protein modification%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135)%2C Ubiquitin-conjugating enzyme%2C E2 (InterPro:IPR000608)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-conjugating enzyme family protein (TAIR:AT1G53025.1)%3B Has 6168 Blast hits to 6144 proteins in 365 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2619%3B Fungi - 1243%3B Plants - 1332%3B Viruses - 17%3B Other Eukaryotes - 957 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC09g48501 ChrC09 + View
Brassica carinata BcaC05g28980 ChrC05 - View
Brassica carinata BcaB06g29563 ChrB06 + View
Brassica carinata BcaB07g33365 ChrB07 + View
Brassica carinata BcaC08g43488 ChrC08 - View
Brassica napus A06p01300 A06 + View
Brassica napus A05p34070 A05 - View
Brassica napus C05p51830 C05 - View
Brassica napus C01p49100 C01 - View
Brassica oleracea BolC1t01522H C1 + View
Brassica oleracea BolC1t04873H C1 - View
Brassica rapa BraA01t03915Z A01 - View
Brassica rapa BraA06t23356Z A06 + View
Beta vulgaris EL10Ac4g08168 PTHR24067:SF100 - UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN-RELATED Chr4_EL10_PGA_scaffold1 - View
Camellia sinensis var. sinensis CSS0003130 PREDICTED: uncharacterized protein LOC104599599 [Nelumbo nucifera] Chr7 + View
Camellia sinensis var. sinensis CSS0002760 PREDICTED: uncharacterized protein LOC100250261 [Vitis vinifera] Chr5 - View
Cicer arietinum L. Ca_01838_v3 Ca_LG1_v3 - View
Coffea canephora Cc05_g12080 Ubiquitin-conjugating enzyme family protein chr5 + View
Citrus clementina Ciclev10007725m.g scaffold_1 + View
Cardamine hirsuta CARHR228430 Protein of unknown function (DUF2921) Chr7 + View
Cardamine hirsuta CARHR090390 Ubiquitin-conjugating enzyme 23 Chr3 + View
Cardamine hirsuta CARHR043240 Ubiquitin-conjugating enzyme family protein Chr1 - View
Citrullus lanatus ClCG11G018090 Ubiquitin-conjugating enzyme family protein LENGTH=543 CG_Chr11 + View
Cucumis melo MELO3C016701.2 Ubiquitin conjugating enzyme, putative chr07 - View
Carica papaya Cpa.g.sc80.59 supercontig_80 - View
Chenopodium quinoa AUR62029384 UBC25: Probable ubiquitin-conjugating enzyme E2 25 C_Quinoa_Scaffold_2939 - View
Capsella rubella Carub.0003s1506 K10581 - ubiquitin-conjugating enzyme E2 O (UBE2O) scaffold_3 + View
Capsella rubella Carub.0001s4217 scaffold_1 - View
Cucumis sativus L. CsaV3_4G033720 Ubiquitin-conjugating enzyme chr4 + View
Daucus carota DCAR_019549 hypothetical protein DCARv2_Chr5 - View
Daucus carota DCAR_020985 hypothetical protein DCARv2_Chr6 + View
Daucus carota DCAR_013102 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv20169 GWHABJS00000013 - View
Davidia involucrata Dinv04307 GWHABJS00000001 + View
Durio zibethinus Duzib192G0710 NW_019168037.1 - View
Durio zibethinus Duzib170G0190 NW_019167871.1 - View
Durio zibethinus Duzib268G0555 NW_019168270.1 - View
Durio zibethinus Duzib213G0908 NW_019167993.1 - View
Erigeron canadensis ECA240G4660 Conyza_canadensis_scaffold:5 + View
Eucalyptus grandis Eucgr.F01120 Chr06 - View
Erythranthe guttata Migut.M00809 scaffold_13 + View
Erythranthe guttata Migut.H01933 scaffold_8 - View
Eutrema salsugineum Thhalv10020387m.g PTHR24067:SF100 - UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN-RELATED scaffold_13 - View
Eutrema salsugineum Thhalv10011411m.g KOG0417//KOG0419 - Ubiquitin-protein ligase // Ubiquitin-protein ligase scaffold_7 + View
Fragaria x ananassa FAN16G2303 PTHR24067:SF100 - UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN-RELATED Fvb3-3 - View
Gossypium hirsutum Gohir.A01G063900 PTHR24067:SF100 - UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN-RELATED A01 + View
Gossypium hirsutum Gohir.D11G297501 PF11145 - Protein of unknown function (DUF2921) (DUF2921) D11 - View
Gossypium hirsutum Gohir.A04G029908 PF11145 - Protein of unknown function (DUF2921) (DUF2921) A04 - View
Glycine max Glyma.12G224000 PF11145 - Protein of unknown function (DUF2921) (DUF2921) Gm12 - View
Glycine max Glyma.06G243300 PTHR24067:SF100 - UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN-RELATED Gm06 + View
Glycine max Glyma.13G277400 PTHR24067:SF100 - UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN-RELATED Gm13 + View
Gossypium raimondii Gorai.007G322400 Chr07 - View
Gossypium raimondii Gorai.002G070200 Chr02 + View
Lupinus albus Lalb_Chr25g0286391 PTHR24067//PTHR24067:SF100 - UBIQUITIN-CONJUGATING ENZYME E2 // UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN-RELATED Lalb_Chr25 + View
Lupinus albus Lalb_Chr20g0121891 KOG0895 - Ubiquitin-conjugating enzyme Lalb_Chr20 + View
Lupinus albus Lalb_Chr01g0006551 PTHR24067//PTHR24067:SF100 - UBIQUITIN-CONJUGATING ENZYME E2 // UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN-RELATED Lalb_Chr01 - View
Lonicera japonica Lj2C288G5 GWHAAZE00000002 - View
Lonicera japonica Lj1C844T3 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_9_96680 PF11145 - Protein of unknown function (DUF2921) (DUF2921) Lsat_1_v8_lg_9 - View
Malus domestica MD03G1227000 Protein of unknown function (DUF2921) Chr03 - View
Malus domestica MD11G1246300 Protein of unknown function (DUF2921) Chr11 - View
Manihot esculenta Manes.03G110600 Chromosome03 + View
Medicago truncatula Medtr2g079270 ubiquitin-conjugating enzyme chr2 + View
Nicotiana tabacum Nitab4.5_0000207g0100 Unknown Nitab4.5_0000207 + View
Petunia axillaris Peaxi162Scf00000g04013 ubiquitin-conjugating enzyme 25 Peaxi162Scf00000 + View
Punica granatum PGR083G1019 NC_045133.1 - View
Prunus persica Prupe.4G181600 Pp04 + View
Pisum sativum Psat5g244560 Ubiquitin-conjugating enzyme chr5LG3 + View
Papaver somniferum PSO210G5086 NC_039359.1 + View
Phaseolus vulgaris Phvul.005G072300 PTHR24067:SF100 - UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN-RELATED Chr05 + View
Rhododendron simsii Rhsim06G0198400 chr06 - View
Rhododendron simsii Rhsim04G0020500 chr04 - View
Salix brachista Sabra11G0103600 GWHAAZH00000011 - View
Salix brachista Sabra16G0262600 GWHAAZH00000016 + View
Solanum lycopersicum Solyc10g007000.3 Ubiquitin-conjugating enzyme family protein (AHRD V3.3 *-* A0A178W4Y0_ARATH) SL4.0ch10 - View
Solanum lycopersicum Solyc12g013820.3 Ubiquitin-conjugating enzyme (AHRD V3.3 *-* A0A200QWS6_9MAGN) SL4.0ch12 - View
Schrenkiella parvula Sp1g39580 PTHR24067:SF100 - UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN-RELATED ch1-2 - View
Schrenkiella parvula Sp3g13590 PTHR24067:SF100 - UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN-RELATED ch3-1 + View
Solanum pennellii Sopen10g002910 Ubiquitin-conjugating enzyme family protein | FUNCTIONS IN: small conjugating protein ligase activity | INVOLVED IN: regulation of protein metabolic process, post-translational protein modification | CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like , Ubiquitin-conjugating enzyme, E2 | BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 25 ., Ubiquitin-conjugating enzyme/RWD-like Spenn-ch10 - View
Solanum pennellii Sopen12g007130 Ubiquitin-conjugating enzyme family protein | FUNCTIONS IN: small conjugating protein ligase activity | INVOLVED IN: regulation of protein metabolic process, post-translational protein modification | CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like , Ubiquitin-conjugating enzyme, E2 | BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 25 ., Ubiquitin-conjugating enzyme/RWD-like Spenn-ch12 - View
Solanum tuberosum PGSC0003DMG400025037 Ubiquitin conjugating enzyme ST4.03ch10 - View
Solanum tuberosum PGSC0003DMG400015361 Ubiquitin conjugating enzyme ST4.03ch12 + View
Selenicereus undatus Hund22911 Scaffold_33680 + View
Trochodendron aralioides TAR624G1418 group9 + View
Trochodendron aralioides TAR626G0073 group3 - View
Trochodendron aralioides TAR629G3158 group0 - View
Tarenaya hassleriana THA.LOC104810477 putative ubiquitin-conjugating enzyme E2 38 isoform X1 NW_010965216.1 + View
Tripterygium wilfordii TWI39G0112 NC_052250.1 - View
Tripterygium wilfordii TWI38G0187 NC_052252.1 + View
Tripterygium wilfordii TWI63G1212 NC_052240.1 - View
Vaccinium macrocarpon vmacro09284 Similar to UBC38: Putative ubiquitin-conjugating enzyme E2 38 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro09535 Protein of unknown function chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro11861 Similar to UBC25: Probable ubiquitin-conjugating enzyme E2 25 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1080G0931 CM024079.1 - View
Vitis vinifera GSVIVG01014343001 chr19 + View