Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G2520 LG-8 - View
Aethionema arabicum Aa31LG10G2040 LG-10 - View
Actinidia chinensis Actinidia09688 Lachesis_group5 + View
Actinidia chinensis Actinidia12801 Lachesis_group19 - View
Arabidopsis lyrata AL3G27760 scaffold_3 - View
Arabidopsis lyrata AL1G61450 scaffold_1 + View
Avicennia marina MSTRG.6835 ScioBoG_102840_HRSCAF_103099 - View
Avicennia marina MSTRG.12907 ScioBoG_17730_HRSCAF_17811 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0E14DC PTHR22847//PTHR22847:SF422 - WD40 REPEAT PROTEIN // PROTEIN SUPPRESSOR OF PHYA-105 1 arahy.Tifrunner.gnm1.Arahy.18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.G40GES PTHR22847//PTHR22847:SF422 - WD40 REPEAT PROTEIN // PROTEIN SUPPRESSOR OF PHYA-105 1 arahy.Tifrunner.gnm1.Arahy.08 + View
Arabidopsis thaliana AT1G53090 SPA1-related 4 Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA4 (and SPA3) predominantly regulates elongation growth in adult plants. SPA1-related 4 (SPA4)%3B FUNCTIONS IN: protein binding%2C signal transducer activity%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: CUL4 RING ubiquitin ligase complex%2C heterotrimeric G-protein complex%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: SPA1-related 3 (TAIR:AT3G15354.1)%3B Has 39467 Blast hits to 23259 proteins in 713 species: Archae - 38%3B Bacteria - 5854%3B Metazoa - 15099%3B Fungi - 8579%3B Plants - 4750%3B Viruses - 0%3B Other Eukaryotes - 5147 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT3G15354 SPA1-related 3 Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA3 (and SPA4) predominantly regulates elongation growth in adult plants. SPA1-related 3 (SPA3)%3B FUNCTIONS IN: protein binding%2C signal transducer activity%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: CUL4 RING ubiquitin ligase complex%2C heterotrimeric G-protein complex%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C WD40 repeat (InterPro:IPR001680)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Protein kinase-like domain (InterPro:IPR011009)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: SPA1-related 4 (TAIR:AT1G53090.2)%3B Has 21839 Blast hits to 15304 proteins in 547 species: Archae - 20%3B Bacteria - 4030%3B Metazoa - 7396%3B Fungi - 4798%3B Plants - 2703%3B Viruses - 2%3B Other Eukaryotes - 2890 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC05g28991 ChrC05 + View
Brassica carinata BcaC09g48495 ChrC09 - View
Brassica carinata BcaB06g29558 ChrB06 - View
Brassica napus A05p34130 A05 + View
Brassica napus C01p49140 C01 + View
Brassica napus C05p51880 C05 + View
Brassica oleracea BolC1t04878H C1 + View
Brassica rapa BraA05t22234Z A05 + View
Brassica rapa BraA01t03919Z A01 + View
Beta vulgaris EL10Ac4g08184 KOG0283//KOG0316//KOG1332 - WD40 repeat-containing protein // Conserved WD40 repeat-containing protein // Vesicle coat complex COPII, subunit SEC13 Chr4_EL10_PGA_scaffold1 + View
Camellia sinensis var. sinensis CSS0012938 SPA1-related 3 isoform 1 [Theobroma cacao] Chr7 + View
Camellia sinensis var. sinensis CSS0027665 SPA1-related 3 isoform 1 [Theobroma cacao] Chr5 + View
Capsicum annuum CAN.G162.56 PGAv.1.6.scaffold162 - View
Cicer arietinum L. Ca_01846_v3 Ca_LG1_v3 + View
Coffea canephora Cc05_g12000 Protein SPA1-RELATED 4 chr5 - View
Citrus clementina Ciclev10007392m.g scaffold_1 - View
Cardamine hirsuta CARHR043310 WD-40 repeat family protein Chr1 + View
Cardamine hirsuta CARHR090320 Cop1 protein-like Chr3 - View
Citrullus lanatus ClCG11G018070 Ubiquitin ligase protein cop1, putative CG_Chr11 - View
Cucumis melo MELO3C016699.2 SPA1-related 3 isoform 3 chr07 + View
Carica papaya Cpa.g.sc80.65 supercontig_80 + View
Capsella rubella Carub.0001s4225 PTHR22847//PTHR22847:SF422 - WD40 REPEAT PROTEIN // PROTEIN SUPPRESSOR OF PHYA-105 1 scaffold_1 + View
Capsella rubella Carub.0003s1500 PTHR22847//PTHR22847:SF422 - WD40 REPEAT PROTEIN // PROTEIN SUPPRESSOR OF PHYA-105 1 scaffold_3 - View
Cucumis sativus L. CsaV3_4G033700 SPA1-related 3 isoform 3 chr4 - View
Daucus carota DCAR_013108 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_020989 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv20174 GWHABJS00000013 + View
Durio zibethinus Duzib268G1876 NW_019168270.1 + View
Durio zibethinus Duzib213G0513 NW_019167993.1 + View
Durio zibethinus Duzib170G0222 NW_019167871.1 + View
Erigeron canadensis ECA240G3895 Conyza_canadensis_scaffold:5 - View
Erigeron canadensis ECA236G4458 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.F03314 Chr06 - View
Erythranthe guttata Migut.H01941 scaffold_8 + View
Eutrema salsugineum Thhalv10020057m.g KOG0265//KOG0266 - U5 snRNP-specific protein-like factor and related proteins // WD40 repeat-containing protein scaffold_13 + View
Eutrema salsugineum Thhalv10012045m.g PTHR22847:SF422 - PROTEIN SUPPRESSOR OF PHYA-105 1 scaffold_7 - View
Fragaria x ananassa FAN16G3354 KOG0286//KOG0296//KOG0316//KOG0645//KOG1332 - G-protein beta subunit // Angio-associated migratory cell protein (contains WD40 repeats) // Conserved WD40 repeat-containing protein // WD40 repeat protein // Vesicle coat complex COPII, subunit SEC13 Fvb3-3 - View
Gossypium hirsutum Gohir.D11G297950 KOG0265//KOG0316//KOG1332 - U5 snRNP-specific protein-like factor and related proteins // Conserved WD40 repeat-containing protein // Vesicle coat complex COPII, subunit SEC13 D11 + View
Glycine max Glyma.12G224600 KOG0265//KOG1033 - U5 snRNP-specific protein-like factor and related proteins // eIF-2alpha kinase PEK/EIF2AK3 Gm12 + View
Glycine max Glyma.06G242100 PTHR22847//PTHR22847:SF422 - WD40 REPEAT PROTEIN // PROTEIN SUPPRESSOR OF PHYA-105 1 Gm06 - View
Glycine max Glyma.13G276700 PTHR22847//PTHR22847:SF422 - WD40 REPEAT PROTEIN // PROTEIN SUPPRESSOR OF PHYA-105 1 Gm13 - View
Gossypium raimondii Gorai.007G322900 Chr07 + View
Lupinus albus Lalb_Chr25g0286351 KOG0278//KOG0296//KOG0316//KOG1446 - Serine/threonine kinase receptor-associated protein // Angio-associated migratory cell protein (contains WD40 repeats) // Conserved WD40 repeat-containing protein // Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 Lalb_Chr25 - View
Lupinus albus Lalb_Chr20g0109651 PTHR22847//PTHR22847:SF422 - WD40 REPEAT PROTEIN // PROTEIN SUPPRESSOR OF PHYA-105 1 Lalb_Chr20 - View
Lonicera japonica Lj1C842T9 GWHAAZE00000001 - View
Malus domestica MD11G1247500 SPA1-related 3 Chr11 + View
Malus domestica MD03G1228100 SPA1-related 3 Chr03 + View
Manihot esculenta Manes.03G109800 Chromosome03 - View
Manihot esculenta Manes.15G087200 Chromosome15 + View
Medicago truncatula Medtr2g085210 ubiquitin ligase cop1, putative chr2 - View
Olea europaea Oeu019323.1 chr5 - View
Petunia axillaris Peaxi162Scf00000g00394 SPA1-related 4 Peaxi162Scf00000 - View
Petunia axillaris Peaxi162Scf00069g01429 SPA1-related 3 Peaxi162Scf00069 + View
Punica granatum PGR083G0059 NC_045133.1 + View
Prunus persica Prupe.4G180900 Pp04 - View
Papaver somniferum PSO541G6280 NC_039363.1 - View
Populus trichocarpa Potri.011G119500 KOG0316//KOG0645//KOG1332 - Conserved WD40 repeat-containing protein // WD40 repeat protein // Vesicle coat complex COPII, subunit SEC13 Chr11 + View
Phaseolus vulgaris Phvul.005G071800 Chr05 - View
Rhododendron simsii Rhsim06G0199300 chr06 + View
Salix brachista Sabra16G0262100 GWHAAZH00000016 - View
Salix brachista Sabra11G0103900 GWHAAZH00000011 + View
Simmondsia chinensis Sc16g0007000 GWHAASQ00000016 + View
Solanum lycopersicum Solyc12g013840.3 Protein SPA1-RELATED 3 (AHRD V3.3 *** A0A2G2VZ51_CAPBA) SL4.0ch12 + View
Solanum lycopersicum Solyc07g063120.4 Protein SPA1-RELATED 3 (AHRD V3.3 *** A0A2G2VZ51_CAPBA) SL4.0ch07 - View
Schrenkiella parvula Sp1g39640 PTHR22847:SF422 - PROTEIN SUPPRESSOR OF PHYA-105 1 ch1-2 + View
Schrenkiella parvula Sp3g13540 PTHR22847:SF422 - PROTEIN SUPPRESSOR OF PHYA-105 1 ch3-1 - View
Solanum pennellii Sopen07g031310 Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA3 (and SPA4) predominantly regulates elongation growth in adult plants. | SPA1-related 3 (SPA3) | FUNCTIONS IN: protein binding, signal transducer activity | INVOLVED IN: protein amino acid phosphorylation | LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , Serine/threonine-protein kinase domain , WD40 repeat , Serine/threonine-protein kinase-like domain , Protein kinase-like domain , WD40 repeat-like-containing domain , Protein kinase, catalytic domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: SPA1-related 4 Spenn-ch07 - View
Solanum pennellii Sopen12g007160 Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA4 (and SPA3) predominantly regulates elongation growth in adult plants. | SPA1-related 4 (SPA4) | FUNCTIONS IN: protein binding, signal transducer activity | INVOLVED IN: protein amino acid phosphorylation | LOCATED IN: CUL4 RING ubiquitin ligase complex, heterotrimeric G-protein complex | EXPRESSED IN: 19 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , Serine/threonine-protein kinase-like domain , Protein kinase-like domain , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , Protein kinase, catalytic domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: SPA1-related 3 Spenn-ch12 + View
Solanum tuberosum PGSC0003DMG400015319 Ubiquitin ligase protein cop1 ST4.03ch12 - View
Selenicereus undatus Hund22901 Scaffold_33680 + View
Trochodendron aralioides TAR629G2071 group0 + View
Tarenaya hassleriana THA.LOC104818079 protein SPA1-RELATED 3 isoform X1 NW_010966021.1 + View
Trifolium pratense TPR.G38971 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI39G0475 NC_052250.1 + View
Vaccinium macrocarpon vmacro11867 Similar to SPA3: Protein SPA1-RELATED 3 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G1421 CM024079.1 + View
Vitis vinifera GSVIVG01014332001 chr19 - View