Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold111G31399 scaffold111 - View
SGA_v2.0_scaffold305G47994 scaffold305 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia22174 Lachesis_group23 - View
Arabidopsis lyrata AL6G45020 scaffold_6 - View
Arabidopsis lyrata AL7G29350 scaffold_7 - View
Avicennia marina MSTRG.11913 ScioBoG_17730_HRSCAF_17811 - View
Avicennia marina MSTRG.1800 ScioBoG_102834_HRSCAF_103055 - View
Avicennia marina MSTRG.13890 ScioBoG_18778_HRSCAF_18863 + View
Amaranthus hybridus Ah.12g052690 F-box protein SKIP8 (SKP1-interacting partner 8) AmaHy_arrow1_Scaffold_12 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.11VL1S PF13474 - SnoaL-like domain (SnoaL_3) arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT4G23960 F-box family protein F-box family protein%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C cyclin-like (InterPro:IPR001810)%2C F-box domain%2C Skp2-like (InterPro:IPR022364)%3B BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT4G10925.3)%3B Has 45 Blast hits to 45 proteins in 11 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 45%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT4G10925 Nuclear transport factor 2 (NTF2) family protein Nuclear transport factor 2 (NTF2) family protein%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C Skp2-like (InterPro:IPR022364)%3B BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G23960.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Nuclear transport factor 2 (NTF2) family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: F-box domain%2C Skp2-like (InterPro:IPR022364)%3B BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT4G23960.1). Chr4 - View
Beta vulgaris EL10Ac5g12937 PF00646//PF13474 - F-box domain (F-box) // SnoaL-like domain (SnoaL_3) Chr5_EL10_PGA_scaffold2 + View
Camellia sinensis var. sinensis CSS0010562 PREDICTED: F-box protein SKIP8 [Vitis vinifera] Chr12 + View
Cicer arietinum L. Ca_17470_v3 Ca_LG6_v3 - View
Coffea canephora Cc08_g16260 F-box protein SKIP8 chr8 + View
Citrus clementina Ciclev10021394m.g scaffold_3 - View
Carya illinoinensis CiPaw.12G081400 PF13474 - SnoaL-like domain (SnoaL_3) Chr12 - View
Carya illinoinensis CiPaw.11G119100 PF13474 - SnoaL-like domain (SnoaL_3) Chr11 - View
Cucumis melo MELO3C016277.2 F-box protein SKIP8 chr07 - View
Capsella rubella Carub.0007s1712 PF12937//PF13474 - F-box-like (F-box-like) // SnoaL-like domain (SnoaL_3) scaffold_7 - View
Capsella rubella Carub.0006s2967 PF13474 - SnoaL-like domain (SnoaL_3) scaffold_6 - View
Cucumis sativus L. CsaV3_4G006720 F-box protein SKIP8 chr4 + View
Davidia involucrata Dinv37515 GWHABJS00000017 - View
Durio zibethinus Duzib205G1188 NW_019168381.1 + View
Durio zibethinus Duzib084G0361 NW_019167827.1 + View
Eucalyptus grandis Eucgr.E00882 Chr05 + View
Erythranthe guttata Migut.A00621 scaffold_1 - View
Eutrema salsugineum Thhalv10028928m.g PF13474 - SnoaL-like domain (SnoaL_3) scaffold_3 + View
Fragaria x ananassa FAN13G1564 PF13474 - SnoaL-like domain (SnoaL_3) Fvb5-2 + View
Fragaria x ananassa FAN18G2696 PF13474 - SnoaL-like domain (SnoaL_3) Fvb5-1 - View
Gossypium hirsutum Gohir.A02G099500 PF13474 - SnoaL-like domain (SnoaL_3) A02 - View
Gossypium hirsutum Gohir.D12G238900 PF13474 - SnoaL-like domain (SnoaL_3) D12 + View
Gossypium hirsutum Gohir.D09G184500 PF13474 - SnoaL-like domain (SnoaL_3) D09 - View
Gossypium hirsutum Gohir.A12G237800 PF13474 - SnoaL-like domain (SnoaL_3) A12 + View
Gossypium hirsutum Gohir.D03G084200 PF13474 - SnoaL-like domain (SnoaL_3) D03 + View
Glycine max Glyma.08G024000 PF13474 - SnoaL-like domain (SnoaL_3) Gm08 + View
Glycine max Glyma.05G217900 PF13474 - SnoaL-like domain (SnoaL_3) Gm05 + View
Gossypium raimondii Gorai.003G078400 Chr03 - View
Gossypium raimondii Gorai.008G256000 Chr08 + View
Helianthus annuus HanXRQChr17g0534951 Putative F-box domain; NTF2-like domain HanXRQChr17 + View
Hydrangea macrophylla Hma1.2p1_0359F.1_g135130 Hma1.2p1_0359F.1 - View
Lupinus albus Lalb_Chr05g0224021 PF13474 - SnoaL-like domain (SnoaL_3) Lalb_Chr05 - View
Lotus japonicus Lj4g0014592 PF13474 - SnoaL-like domain (SnoaL_3) chr4 - View
Lonicera japonica Lj2C163G16 GWHAAZE00000002 - View
Malus domestica MD14G1130800 Nuclear transport factor 2 (NTF2) family protein Chr14 + View
Malus domestica MD06G1109700 Nuclear transport factor 2 (NTF2) family protein Chr06 + View
Manihot esculenta Manes.02G008400 Chromosome02 - View
Medicago truncatula Medtr8g099610 nuclear transport factor 2 (NTF2) family protein chr8 + View
Punica granatum PGR042G3213 NC_045130.1 - View
Prunus persica Prupe.5G122700 PF13474 - SnoaL-like domain (SnoaL_3) Pp05 + View
Papaver somniferum PSO135G1020 NW_020631041.1 + View
Populus trichocarpa Potri.001G089600 PF13474 - SnoaL-like domain (SnoaL_3) Chr01 - View
Populus trichocarpa Potri.003G141600 PF13474 - SnoaL-like domain (SnoaL_3) Chr03 + View
Phaseolus vulgaris Phvul.002G299800 PF13474 - SnoaL-like domain (SnoaL_3) Chr02 + View
Rosa chinensis RcHm_v2.0_Chr7g0194161 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim07G0081500 chr07 - View
Salvia bowleyana SalBow1G0822 GWHASIU00000001 + View
Salix brachista Sabra03G0102000 GWHAAZH00000003 + View
Salix brachista Sabra01G0065800 GWHAAZH00000001 - View
Simmondsia chinensis Sc07g0010100 GWHAASQ00000007 + View
Sechium edule Sed0013108 LG07 - View
Solanum lycopersicum Solyc08g082560.3 F-box protein SKIP8 (AHRD V3.3 *** A0A1U8GB65_CAPAN) SL4.0ch08 + View
Schrenkiella parvula Sp6g06570 PF13474 - SnoaL-like domain (SnoaL_3) ch6-1 + View
Solanum pennellii Sopen08g030810 Nuclear transport factor 2 (NTF2) family protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: F-box domain, Skp2-like | BEST Arabidopsis thaliana protein match is: F-box family protein . Spenn-ch08 + View
Selenicereus undatus Hund14208 Scaffold_33677 - View
Trochodendron aralioides TAR374G1437 group12 + View
Trochodendron aralioides TAR375G0238 group15 + View
Theobroma cacao Thecc.03G300600 Nuclear transport factor 2 family protein Chromosome_3 + View
Trifolium pratense TPR.G3399 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI15G0686 NC_052247.1 + View
Vaccinium macrocarpon vmacro13890 Similar to SKIP8: F-box protein SKIP8 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G3542 CM024069.1 + View
Vitis vinifera GSVIVG01019559001 chr2 + View