Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold173G39159 scaffold173 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Avicennia marina MSTRG.11967 ScioBoG_17730_HRSCAF_17811 + View
Avicennia marina MSTRG.25625 ScioBoG_4119_HRSCAF_4138 - View
Arabidopsis thaliana AT1G63840 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: response to abscisic acid stimulus%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G41400.1)%3B Has 7174 Blast hits to 7158 proteins in 242 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1914%3B Fungi - 486%3B Plants - 3881%3B Viruses - 16%3B Other Eukaryotes - 877 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB07g31414 ChrB07 - View
Brassica carinata BcaC04g22508 ChrC04 - View
Brassica napus C09p18530 C09 + View
Brassica napus A09p13960 A09 - View
Brassica napus A09p15250 A09 + View
Brassica oleracea BolC9t54576H C9 - View
Brassica rapa BraA09t37172Z A09 + View
Brassica rapa BraA09t37042Z A09 - View
Camellia sinensis var. sinensis CSS0017202 PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Nelumbo nucifera] Chr14 - View
Citrullus lanatus ClCG01G002500 RING finger family protein CG_Chr01 + View
Cucumis melo MELO3C005696.2 E3 ubiquitin-protein ligase RHA1B chr09 - View
Capsella rubella Carub.0002s0101 PTHR14155 - RING FINGER DOMAIN-CONTAINING scaffold_2 + View
Capsella rubella Carub.0007s3408 PTHR14155//PTHR14155:SF176 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED scaffold_7 + View
Cucumis sativus L. CsaV3_5G002600 E3 ubiquitin-protein ligase RHA1B chr5 + View
Daucus carota DCAR_008363 hypothetical protein DCARv2_Chr2 + View
Durio zibethinus Duzib068G0507 NW_019167838.1 - View
Eucalyptus grandis Eucgr.D01827 Chr04 + View
Erythranthe guttata Migut.A00749 scaffold_1 - View
Fragaria x ananassa FAN13G1428 K16281 - RING-H2 zinc finger protein RHA1 (RHA1) Fvb5-2 - View
Fragaria x ananassa FAN04G2456 KOG1493 - Anaphase-promoting complex (APC), subunit 11 Fvb5-4 - View
Fragaria x ananassa FAN08G3070 K16281 - RING-H2 zinc finger protein RHA1 (RHA1) Fvb5-3 + View
Glycine max Glyma.11G022400 K16281 - RING-H2 zinc finger protein RHA1 (RHA1) Gm11 + View
Glycine max Glyma.01G221300 K16281 - RING-H2 zinc finger protein RHA1 (RHA1) Gm01 - View
Gossypium raimondii Gorai.003G156500 Chr03 + View
Gossypium raimondii Gorai.008G120600 Chr08 + View
Lupinus albus Lalb_Chr09g0320921 K16281 - RING-H2 zinc finger protein RHA1 (RHA1) Lalb_Chr09 + View
Lupinus albus Lalb_Chr10g0096791 PTHR14155//PTHR14155:SF2 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL60 Lalb_Chr10 + View
Lotus japonicus LjContig00312_ERROPOS870357g0004889 K16281 - RING-H2 zinc finger protein RHA1 (RHA1) Contig00312_ERROPOS870357 + View
Lactuca sativa Lsat_1_v5_gn_6_85320 PTHR14155:SF175 - E3 UBIQUITIN-PROTEIN LIGASE RHA2B-RELATED Lsat_1_v8_lg_6 + View
Prunus persica Prupe.5G104300 KOG1493 - Anaphase-promoting complex (APC), subunit 11 Pp05 - View
Populus trichocarpa Potri.003G130900 PTHR14155:SF175 - E3 UBIQUITIN-PROTEIN LIGASE RHA2B-RELATED Chr03 - View
Schrenkiella parvula Sp2g00850 PTHR14155:SF175 - E3 UBIQUITIN-PROTEIN LIGASE RHA2B-RELATED ch2-1 + View
Tripterygium wilfordii TWI60G1479 NC_052246.1 + View