Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold75G24924 scaffold75 - View
SGA_v2.0_scaffold35G14206 scaffold35 - View
SGA_v2.0_scaffold126G33832 scaffold126 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G22890 LG-5 - View
Arabidopsis lyrata AL5G34560 scaffold_5 - View
Avicennia marina MSTRG.19106 ScioBoG_25048_HRSCAF_25167 + View
Avicennia marina MSTRG.10273 ScioBoG_13798_HRSCAF_13862 + View
Avicennia marina MSTRG.5689 ScioBoG_102839_HRSCAF_103093 + View
Avicennia marina MSTRG.26754 ScioBoG_52287_HRSCAF_52434 - View
Aquilegia oxysepala Aqoxy2G02015 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.39FK0T K07901 - Ras-related protein Rab-8A (RAB8A, MEL) arahy.Tifrunner.gnm1.Arahy.08 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.H5VR8D K07901 - Ras-related protein Rab-8A (RAB8A, MEL) arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.AK3PBI K07901 - Ras-related protein Rab-8A (RAB8A, MEL) arahy.Tifrunner.gnm1.Arahy.18 + View
Arabidopsis thaliana AT3G53610 RAB GTPase homolog 8 GTPase AtRAB8 (atrab8) RAB GTPase homolog 8 (RAB8)%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: protein transport%2C small GTPase mediated signal transduction%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806)%2C Small GTP-binding protein (InterPro:IPR005225)%2C Small GTPase (InterPro:IPR020851)%2C Ras (InterPro:IPR013753)%2C Ras small GTPase%2C Rab type (InterPro:IPR003579)%3B BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein (TAIR:AT5G59840.1)%3B Has 29736 Blast hits to 29676 proteins in 811 species: Archae - 22%3B Bacteria - 184%3B Metazoa - 15446%3B Fungi - 4267%3B Plants - 3567%3B Viruses - 20%3B Other Eukaryotes - 6230 (source: NCBI BLink). Chr3 - View
Brassica napus A02p06800 A02 + View
Brassica napus A03p11460 A03 + View
Brassica napus C02p12090 C02 + View
Brassica rapa BraA02t05758Z A02 + View
Beta vulgaris EL10Ac7g15968 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) Chr7_EL10_PGA_scaffold5 - View
Camellia sinensis var. sinensis CSS0016214 Rab3 [Hevea brasiliensis] Chr4 + View
Camellia sinensis var. sinensis CSS0024017 small GTP-binding protein [Pisum sativum] Chr10 + View
Capsicum annuum CAN.G501.11 PGAv.1.6.scaffold501 - View
Cicer arietinum L. Ca_19188_v3 Ca_LG6_v3 + View
Cicer arietinum L. Ca_09602_v3 Ca_LG4_v3 - View
Cicer arietinum L. Ca_08792_v3 Ca_LG3_v3 + View
Corylus avellana Haze_24040 Similar to RABE1C: Ras-related protein RABE1c (Arabidopsis thaliana OX%3D3702) 6 - View
Corylus avellana Haze_20737 Similar to RABE1C: Ras-related protein RABE1c (Arabidopsis thaliana OX%3D3702) 10 - View
Coffea canephora Cc06_g03020 Ras-related protein RABE1c chr6 + View
Citrus clementina Ciclev10029259m.g scaffold_8 - View
Citrus clementina Ciclev10012725m.g scaffold_6 - View
Ceratophyllum demersum CDE09G1000 7 + View
Ceratophyllum demersum CDE02G3606 1 - View
Cardamine hirsuta CARHR163540 Ras-related protein Rab-8A Chr5 - View
Carya illinoinensis CiPaw.09G188500 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) Chr09 - View
Carya illinoinensis CiPaw.10G142700 PF00025//PF00071 - ADP-ribosylation factor family (Arf) // Ras family (Ras) Chr10 - View
Carya illinoinensis CiPaw.13G098800 PTHR24073:SF541 - RAS-RELATED PROTEIN RABE1A Chr13 + View
Carya illinoinensis CiPaw.01G283400 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) Chr01 - View
Citrullus lanatus ClCG10G020900 Ras-related protein Rab-8A CG_Chr10 - View
Citrullus lanatus ClCG04G008430 Ras-related protein Rab-8A CG_Chr04 + View
Cucumis melo MELO3C009281.2 Ras-related protein-like protein chr04 - View
Cucumis melo MELO3C013681.2 ras-related protein RABE1c-like chr11 - View
Cucumis melo MELO3C003106.2 ras-related protein RABE1a chr08 - View
Chenopodium quinoa AUR62009620 RAB1BV: Ras-related protein RAB1BV C_Quinoa_Scaffold_2493 + View
Chenopodium quinoa AUR62001832 RAB1BV: Ras-related protein RAB1BV C_Quinoa_Scaffold_2716 + View
Capsella rubella Carub.0005s2019 PTHR24073//PTHR24073:SF541 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABE1A scaffold_5 - View
Capsella rubella Carub.0008s2063 PTHR24073//PTHR24073:SF561 - FAMILY NOT NAMED // GTP-BINDING PROTEIN ARA-3-RELATED scaffold_8 + View
Cucumis sativus L. CsaV3_3G035110 Ras-related protein like chr3 + View
Cucumis sativus L. CsaV3_4G024720 Ras-related protein like chr4 - View
Daucus carota DCAR_020855 hypothetical protein DCARv2_Chr6 + View
Daucus carota DCAR_009256 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_006002 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv37211 GWHABJS00000021 - View
Davidia involucrata Dinv31429 GWHABJS00000004 - View
Davidia involucrata Dinv35641 GWHABJS00000015 + View
Durio zibethinus Duzib128G1739 NW_019168481.1 - View
Durio zibethinus Duzib170G0165 NW_019167871.1 + View
Durio zibethinus Duzib106G1596 NW_019168492.1 - View
Durio zibethinus Duzib128G0649 NW_019168481.1 + View
Durio zibethinus Duzib093G0925 NW_019167937.1 - View
Durio zibethinus Duzib150G0209 NW_019167882.1 - View
Erigeron canadensis ECA236G4827 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA238G1268 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA248G2735 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.A01236 Chr01 + View
Erythranthe guttata Migut.J00367 scaffold_10 + View
Erythranthe guttata Migut.L01621 scaffold_12 + View
Eutrema salsugineum Thhalv10010710m.g K07901 - Ras-related protein Rab-8A (RAB8A, MEL) scaffold_16 + View
Fragaria x ananassa FAN11G2509 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) Fvb3-4 - View
Fragaria x ananassa FAN16G1893 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) Fvb3-3 - View
Fragaria x ananassa FAN09G2254 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) Fvb6-2 - View
Fragaria x ananassa FAN02G2293 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) Fvb6-4 + View
Fragaria x ananassa FAN21G2701 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) Fvb3-2 - View
Fragaria vesca FvH4_6g14360 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) Fvb6 + View
Gossypium hirsutum Gohir.D13G234300 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) D13 + View
Gossypium hirsutum Gohir.A09G158700 PTHR24073:SF516 - RAS-RELATED PROTEIN RABE1C A09 + View
Gossypium hirsutum Gohir.D04G119100 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) D04 - View
Gossypium hirsutum Gohir.A04G079800 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) A04 - View
Gossypium hirsutum Gohir.D13G020700 PTHR24073//PTHR24073:SF541 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABE1A D13 + View
Gossypium hirsutum Gohir.A13G020100 PTHR24073//PTHR24073:SF541 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABE1A A13 + View
Gossypium hirsutum Gohir.A05G097700 KOG0079//KOG0093 - GTP-binding protein H-ray, small G protein superfamily // GTPase Rab3, small G protein superfamily A05 + View
Gossypium hirsutum Gohir.D09G154100 PTHR24073:SF516 - RAS-RELATED PROTEIN RABE1C D09 + View
Gossypium hirsutum Gohir.D01G208600 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) D01 - View
Gossypium hirsutum Gohir.A01G219500 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) A01 - View
Gossypium hirsutum Gohir.D05G097800 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) D05 + View
Glycine max Glyma.13G333500 PTHR24073//PTHR24073:SF541 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABE1A Gm13 - View
Glycine max Glyma.15G040600 PTHR24073//PTHR24073:SF561 - FAMILY NOT NAMED // GTP-BINDING PROTEIN ARA-3-RELATED Gm15 + View
Gossypium raimondii Gorai.006G175600 Chr06 + View
Gossypium raimondii Gorai.009G424200 Chr09 - View
Gossypium raimondii Gorai.013G023100 Chr13 + View
Gossypium raimondii Gorai.002G253800 Chr02 - View
Gossypium raimondii Gorai.009G101400 Chr09 + View
Helianthus annuus HanXRQChr14g0453761 Putative small GTPase superfamily; Ran GTPase; Small GTPase superfamily, ARF type; P-loop containing nucleoside triphosphate hydrolase HanXRQChr14 + View
Helianthus annuus HanXRQChr13g0399051 Putative small GTPase superfamily; Ran GTPase; Small GTPase superfamily, ARF type; P-loop containing nucleoside triphosphate hydrolase HanXRQChr13 - View
Hydrangea macrophylla Hma1.2p1_0350F.1_g132420 Hma1.2p1_0350F.1 + View
Lupinus albus Lalb_Chr01g0003791 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) Lalb_Chr01 + View
Lupinus albus Lalb_Chr20g0113201 PTHR24073:SF561 - GTP-BINDING PROTEIN ARA-3-RELATED Lalb_Chr20 + View
Lupinus albus Lalb_Chr02g0153121 PTHR24073//PTHR24073:SF541 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABE1A Lalb_Chr02 + View
Lotus japonicus Lj5g0015726 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) chr5 - View
Lotus japonicus Lj1g0015104 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) chr1 - View
Lonicera japonica Lj2A100T69 GWHAAZE00000002 + View
Lonicera japonica Lj1A158T51 GWHAAZE00000001 + View
Lonicera japonica Lj1A933T67 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_2_110620 Lsat_1_v8_lg_2 - View
Lactuca sativa Lsat_1_v5_gn_5_168581 Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_6_32460 PTHR24073:SF516 - RAS-RELATED PROTEIN RABE1C Lsat_1_v8_lg_6 - View
Lactuca sativa Lsat_1_v5_gn_1_55860 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) Lsat_1_v8_lg_1 - View
Magnolia biondii MBI14_g43767_MAGBIO AED:0.13 Chr14 - View
Malus domestica MD07G1192200 RAB GTPase homolog 8 Chr07 + View
Malus domestica MD04G1120500 RAB GTPase homolog 8 Chr04 - View
Malus domestica MD12G1137800 RAB GTPase homolog 8 Chr12 - View
Manihot esculenta Manes.09G086600 Chromosome09 - View
Manihot esculenta Manes.04G031300 Chromosome04 - View
Manihot esculenta Manes.11G134000 Chromosome11 + View
Manihot esculenta Manes.08G076950 Chromosome08 - View
Medicago truncatula Medtr4g063160 RAB GTPase-like protein A5B chr4 - View
Medicago truncatula Medtr2g096550 RAB GTPase-like protein A1D chr2 - View
Medicago truncatula Medtr1g068730 RAB GTPase-like protein A5B chr1 - View
Nelumbo nucifera Nn2g10456 chr2 + View
Nelumbo nucifera Nn2g12902 chr2 - View
Nicotiana tabacum Nitab4.5_0000527g0050 Small GTPase superfamily, Small GTPase superfamily, Ras type, Small GTPase superfamily, Rho type, Small GTPase superfamily, Rab type, Small GTP-binding protein domain, Ran GTPase, P-loop containing nucleoside triphosphate hydrolase Nitab4.5_0000527 - View
Olea europaea Oeu024366.1 chr15 + View
Petunia axillaris Peaxi162Scf00039g01120 Ras-related protein Rab-8A Peaxi162Scf00039 - View
Punica granatum PGR004G2361 NC_045131.1 - View
Punica granatum PGR119G0281 NC_045132.1 - View
Prunus persica Prupe.6G083700 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) Pp06 + View
Prunus persica Prupe.6G249800 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) Pp06 - View
Populus trichocarpa Potri.010G208900 PTHR24073:SF516 - RAS-RELATED PROTEIN RABE1C Chr10 + View
Populus trichocarpa Potri.009G027900 PTHR24073//PTHR24073:SF561 - FAMILY NOT NAMED // GTP-BINDING PROTEIN ARA-3-RELATED Chr09 - View
Phaseolus vulgaris Phvul.L003143 PTHR24073:SF541 - RAS-RELATED PROTEIN RABE1A scaffold_15 - View
Phaseolus vulgaris Phvul.007G158500 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) Chr07 + View
Quercus lobata QL07p046871 7 - View
Quercus lobata QL01p033131 1 + View
Rosa chinensis RcHm_v2.0_Chr3g0467421 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim05G0187700 chr05 - View
Rhododendron simsii Rhsim13G0086200 chr13 + View
Salvia bowleyana SalBow3G3915 GWHASIU00000006 - View
Salvia bowleyana SalBow3G4105 GWHASIU00000006 - View
Salvia bowleyana SalBow4G1545 GWHASIU00000008 - View
Salix brachista Sabra10G0161400 GWHAAZH00000010 + View
Salix brachista Sabra09G0019000 GWHAAZH00000009 - View
Simmondsia chinensis Sc01g0003960 GWHAASQ00000001 - View
Sechium edule Sed0026613 LG03 - View
Sechium edule Sed0023428 LG14 - View
Sechium edule Sed0024488 LG04 + View
Solanum lycopersicum Solyc09g010370.3 Rab family GTPase (AHRD V3.3 *** A0A1Y1I3W2_KLENI) SL4.0ch09 - View
Solanum lycopersicum Solyc06g005340.3 RAB GTPase homolog 8 (AHRD V3.3 *-* AT3G53610.3) SL4.0ch06 - View
Solanum lycopersicum Solyc10g086310.1 RAB GTPase (AHRD V3.3 *** A0A2U1PC99_ARTAN) SL4.0ch10 - View
Schrenkiella parvula Sp5g08740 K07901 - Ras-related protein Rab-8A (RAB8A, MEL) ch5-1 + View
Solanum pennellii Sopen10g035730 Ras-related small GTP-binding family protein | FUNCTIONS IN: GTP binding | INVOLVED IN: protein transport, small GTPase mediated signal transduction | LOCATED IN: plasma membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Ras GTPase , Small GTP-binding protein , Small GTPase , Ras , Ras small GTPase, Rab type | BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 8A Spenn-ch10 - View
Solanum pennellii Sopen06g001310 Ras-related small GTP-binding family protein | FUNCTIONS IN: GTP binding | INVOLVED IN: protein transport, small GTPase mediated signal transduction | LOCATED IN: plasma membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Ras GTPase , Small GTP-binding protein , Small GTPase , Ras , Ras small GTPase, Rab type | BEST Arabidopsis thaliana protein match is: RAB GTPase homolog 8A Spenn-ch06 - View
Solanum pennellii Sopen04g005550 small GTP-binding protein (ara-3) | ARA3 | FUNCTIONS IN: GTP binding | INVOLVED IN: ethylene mediated signaling pathway | LOCATED IN: plasma membrane | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Ras GTPase , Small GTP-binding protein , Small GTPase , Ras , Ras small GTPase, Rab type | BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein Spenn-ch04 - View
Solanum pennellii Sopen09g005110 GTPase AtRAB8 (atrab8) | RAB GTPase homolog 8 (RAB8) | FUNCTIONS IN: GTP binding | INVOLVED IN: protein transport, small GTPase mediated signal transduction | LOCATED IN: plasma membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Ras GTPase , Small GTP-binding protein , Small GTPase , Ras , Ras small GTPase, Rab type | BEST Arabidopsis thaliana protein match is: Ras-related small GTP-binding family protein Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400027738 GTP-binding protein ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG400019159 Small GTP-binding protein ST4.03ch10 + View
Solanum tuberosum PGSC0003DMG400008853 Small GTP-binding protein ST4.03ch09 + View
Selenicereus undatus Hund18936 Scaffold_33675 + View
Trochodendron aralioides TAR623G0622 group7 - View
Trochodendron aralioides TAR633G1648 group2 + View
Theobroma cacao Thecc.09G327200 Chromosome_9 + View
Theobroma cacao Thecc.05G045000 Ras-related small GTP-binding family protein Chromosome_5 + View
Tarenaya hassleriana THA.LOC104806578 ras-related protein RABE1c NW_010962392.1 + View
Tarenaya hassleriana THA.LOC104823427 ras-related protein RABE1a-like NW_010966881.1 + View
Trifolium pratense TPR.G34309 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI53G0452 NC_052244.1 - View
Tripterygium wilfordii TWI74G0105 NC_052234.1 + View
Tripterygium wilfordii TWI77G0109 NC_052236.1 + View
Utricularia gibba unitig_21.g21053 unitig_21 + View
Vaccinium macrocarpon vmacro03108 Similar to RABE1C: Ras-related protein RABE1c (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro14507 Similar to RABE1C: Ras-related protein RABE1c (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1127G2173 CM024076.1 + View
Vitis vinifera GSVIVG01016596001 chr13 - View
Vitis vinifera GSVIVG01025619001 chr8 + View
Zea mays Zm00001eb289730 Zm00001e031836 Ras-related protein ARA-3 Ras-related protein RABE1c 6 - View
Zea mays Zm00001eb351420 Zm00001e027248 Ras-related protein ARA-3 Ras-related protein RABE1c 8 - View