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Dicots PLAZA 5.0
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SGA_v2.0_scaffold85G26810
Gene toolbox
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Sequences
BLAST Hits
Orthologs
Colinear Genes Pairs
Genome Browser
Homology related tools
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Multiple Sequence Alignment
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Warning: This instance will be removed starting from November 1st 2025
Please use the following link from now on:
Dicots 5.1
Paralogs (intra-species colinear regions)
Gene id
Description
Chromosome
Strand
Multiplicon
SGA_v2.0_scaffold94G28557
scaffold94
-
View
Orthologs (inter-species colinear regions)
Organism
Gene id
Description
Chromosome
Strand
Multiplicon
Acer truncatum
Atru.chr8.2106
chr8
+
View
Acer truncatum
Atru.chr12.272
chr12
+
View
Actinidia chinensis
Actinidia02898
Lachesis_group22
-
View
Actinidia chinensis
Actinidia12878
Lachesis_group20
-
View
Actinidia chinensis
Actinidia13814
Lachesis_group21
-
View
Actinidia chinensis
Actinidia29161
Lachesis_group3
-
View
Actinidia chinensis
Actinidia02379
Lachesis_group3
-
View
Arabidopsis lyrata
AL5G35000
scaffold_5
+
View
Avicennia marina
MSTRG.10240
ScioBoG_13798_HRSCAF_13862
-
View
Avicennia marina
MSTRG.19049
ScioBoG_25048_HRSCAF_25167
-
View
Avicennia marina
MSTRG.5621
ScioBoG_102839_HRSCAF_103093
-
View
Aquilegia oxysepala
Aqoxy1G00786
CHR01
-
View
Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.463IUL
arahy.Tifrunner.gnm1.Arahy.02
+
View
Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EVQB8B
arahy.Tifrunner.gnm1.Arahy.07
-
View
Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KBQI3L
arahy.Tifrunner.gnm1.Arahy.12
+
View
Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RKI1B6
arahy.Tifrunner.gnm1.Arahy.17
-
View
Arabidopsis thaliana
AT3G54000
TIP41-like protein CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022260 (InterPro:IPR016802)%3B Has 94 Blast hits to 94 proteins in 14 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 94%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
Chr3
+
View
Amborella trichopoda
ATR0210G013
AmTr_v1.0_scaffold00165
-
View
Brassica carinata
BcaB02g07755
ChrB02
-
View
Brassica carinata
BcaC08g44658
ChrC08
+
View
Brassica carinata
BcaB01g00225
ChrB01
-
View
Brassica carinata
BcaB02g08495
ChrB02
-
View
Brassica napus
C04p38580
C04
-
View
Brassica napus
C06p21800
C06
+
View
Brassica napus
A04p05780
A04
-
View
Brassica napus
A09p46920
A09
+
View
Brassica oleracea
BolC4t25433H
C4
-
View
Brassica rapa
BraA07t29871Z
A07
+
View
Brassica rapa
BraA04t16274Z
A04
-
View
Brassica rapa
BraA09t40159Z
A09
+
View
Camellia sinensis var. sinensis
CSS0004370
PREDICTED: uncharacterized protein LOC105174506 [Sesamum indicum]
Chr10
+
View
Camellia sinensis var. sinensis
CSS0032417
conserved hypothetical protein [Ricinus communis]
Chr4
-
View
Camellia sinensis var. sinensis
CSS0030928
PREDICTED: uncharacterized protein LOC105174506 [Sesamum indicum]
Chr4
+
View
Cicer arietinum L.
Ca_05916_v3
Ca_LG2_v3
+
View
Cicer arietinum L.
Ca_07581_v3
Ca_LG3_v3
+
View
Corylus avellana
Haze_17155
Protein of unknown function
11
+
View
Corylus avellana
Haze_20899
Protein of unknown function
10
+
View
Coffea canephora
Cc06_g02010
Putative CONTAINS InterPro DOMAIN/s
chr6
-
View
Coffea canephora
Cc02_g07190
Putative CONTAINS InterPro DOMAIN/s
chr2
-
View
Citrus clementina
Ciclev10029021m.g
scaffold_8
+
View
Citrus clementina
Ciclev10011799m.g
scaffold_6
+
View
Ceratophyllum demersum
CDE02G1727
1
-
View
Ceratophyllum demersum
CDE04G3507
2
+
View
Ceratophyllum demersum
CDE03G0277
12
+
View
Ceratophyllum demersum
CDE09G1396
7
+
View
Carpinus fangiana
Cfa001394
Cfa01
-
View
Carpinus fangiana
Cfa017294
Cfa07
-
View
Cardamine hirsuta
CARHR163900
unknown protein
Chr5
+
View
Carya illinoinensis
CiPaw.09G202700
Chr09
+
View
Carya illinoinensis
CiPaw.14G063600
Chr14
-
View
Carya illinoinensis
CiPaw.10G150200
Chr10
+
View
Carya illinoinensis
CiPaw.02G188400
Chr02
+
View
Citrullus lanatus
ClCG10G021590
IMP dehydrogenase/GMP reductase, putative
CG_Chr10
+
View
Citrullus lanatus
ClCG04G007510
IMP dehydrogenase/GMP reductase, putative
CG_Chr04
+
View
Cucumis melo
MELO3C009213.2
G patch domain protein
chr04
+
View
Cucumis melo
MELO3C003199.2
G patch domain protein
chr08
-
View
Carica papaya
Cpa.g.sc56.66
supercontig_56
+
View
Carica papaya
Cpa.g.sc19.247
supercontig_19
-
View
Capsella rubella
Carub.0005s2059
scaffold_5
+
View
Cucumis sativus L.
CsaV3_4G025740
TIP41-like protein
chr4
-
View
Cucumis sativus L.
CsaV3_3G034420
TIP41-like protein
chr3
-
View
Daucus carota
DCAR_005928
hypothetical protein
DCARv2_Chr2
-
View
Daucus carota
DCAR_028803
hypothetical protein
DCARv2_Chr8
+
View
Davidia involucrata
Dinv37108
GWHABJS00000021
+
View
Davidia involucrata
Dinv34448
GWHABJS00000009
+
View
Davidia involucrata
Dinv43085
GWHABJS00000085
-
View
Davidia involucrata
Dinv35538
GWHABJS00000015
-
View
Durio zibethinus
Duzib128G0075
NW_019168481.1
+
View
Durio zibethinus
Duzib093G0147
NW_019167937.1
+
View
Durio zibethinus
Duzib106G0325
NW_019168492.1
+
View
Durio zibethinus
Duzib114G0703
NW_019167926.1
-
View
Erigeron canadensis
ECA236G1029
Conyza_canadensis_scaffold:3
+
View
Eucalyptus grandis
Eucgr.J01995
Chr10
-
View
Eucalyptus grandis
Eucgr.K03018
Chr11
-
View
Eucalyptus grandis
Eucgr.B02733
Chr01
-
View
Erythranthe guttata
Migut.L01977
scaffold_12
+
View
Erythranthe guttata
Migut.J00260
scaffold_10
-
View
Eutrema salsugineum
Thhalv10010478m.g
scaffold_16
-
View
Fragaria x ananassa
FAN10G3504
Fvb7-1
+
View
Fragaria x ananassa
FAN06G3577
Fvb7-2
+
View
Fragaria x ananassa
FAN14G3619
Fvb6-1
+
View
Fragaria x ananassa
FAN05G2922
Fvb6-3
-
View
Fragaria x ananassa
FAN03G2145
Fvb7-3
-
View
Fragaria x ananassa
FAN01G1897
Fvb7-4
-
View
Fragaria x ananassa
FAN25G3787
Fvb3-1
-
View
Fragaria x ananassa
FAN06G2816
Fvb7-2
+
View
Fragaria x ananassa
FAN09G1692
Fvb6-2
+
View
Fragaria vesca
FvH4_6g12650
Fvb6
-
View
Fragaria vesca
FvH4_7g23630
Fvb7
+
View
Gossypium hirsutum
Gohir.A11G328200
A11
+
View
Gossypium hirsutum
Gohir.A04G086100
A04
+
View
Gossypium hirsutum
Gohir.D04G126000
D04
+
View
Gossypium hirsutum
Gohir.A09G161600
A09
+
View
Gossypium hirsutum
Gohir.D10G238700
D10
-
View
Gossypium hirsutum
Gohir.D11G347100
D11
+
View
Gossypium hirsutum
Gohir.D09G157200
D09
+
View
Glycine max
Glyma.01G106500
Gm01
+
View
Glycine max
Glyma.14G063900
Gm14
-
View
Glycine max
Glyma.07G141000
Gm07
+
View
Glycine max
Glyma.02G252700
Gm02
+
View
Glycine max
Glyma.18G191000
Gm18
+
View
Gossypium raimondii
Gorai.006G178800
Chr06
+
View
Gossypium raimondii
Gorai.003G127200
Chr03
-
View
Gossypium raimondii
Gorai.007G377500
Chr07
+
View
Gossypium raimondii
Gorai.012G109000
Chr12
+
View
Gossypium raimondii
Gorai.011G274600
Chr11
+
View
Helianthus annuus
HanXRQChr04g0124601
Uncharacterized protein, partly conserved in plant genome(s), supported by expression data
HanXRQChr04
+
View
Hydrangea macrophylla
Hma1.2p1_0671F.1_g200660
Hma1.2p1_0671F.1
+
View
Hydrangea macrophylla
Hma1.2p1_0026F.1_g016650
Hma1.2p1_0026F.1
+
View
Lupinus albus
Lalb_Chr19g0124971
Lalb_Chr19
-
View
Lotus japonicus
Lj1g0009897
chr1
+
View
Lotus japonicus
LjContig00141g0001836
Contig00141
-
View
Lonicera japonica
Lj3C959G13
GWHAAZE00000003
-
View
Lonicera japonica
Lj1A945T19
GWHAAZE00000001
+
View
Lonicera japonica
Lj2A85T61
GWHAAZE00000002
-
View
Lactuca sativa
Lsat_1_v5_gn_8_80861
Lsat_1_v8_lg_8
+
View
Magnolia biondii
MBI14_g02856_MAGBIO
AED:0.07
Chr14
+
View
Malus domestica
MD03G1082700
Protein of unknown function
Chr03
-
View
Malus domestica
MD04G1140200
Protein of unknown function
Chr04
+
View
Malus domestica
MD07G1207900
Protein of unknown function
Chr07
+
View
Malus domestica
MD12G1155400
Protein of unknown function
Chr12
+
View
Malus domestica
MD01G1142200
Protein of unknown function
Chr01
+
View
Manihot esculenta
Manes.02G125700
Chromosome02
-
View
Manihot esculenta
Manes.01G167300
Chromosome01
-
View
Manihot esculenta
Manes.07G123000
Chromosome07
+
View
Manihot esculenta
Manes.09G099100
Chromosome09
+
View
Medicago truncatula
Medtr5g081460
hypothetical protein
chr5
+
View
Nelumbo nucifera
Nn2g13535
chr2
+
View
Nelumbo nucifera
Nn2g11296
chr2
+
View
Nicotiana tabacum
Nitab4.5_0000652g0060
Unknown
Nitab4.5_0000652
+
View
Nicotiana tabacum
Nitab4.5_0000119g0370
Unknown
Nitab4.5_0000119
-
View
Nicotiana tabacum
Nitab4.5_0000008g0230
Unknown
Nitab4.5_0000008
+
View
Oryza sativa ssp. japonica
Os01g0850000
Uncharacterised conserved protein UCP022260 domain containing protein.
chr01
+
View
Petunia axillaris
Peaxi162Scf00014g01511
Unknown protein
Peaxi162Scf00014
-
View
Petunia axillaris
Peaxi162Scf00009g03319
Unknown protein
Peaxi162Scf00009
-
View
Punica granatum
PGR004G1424
NC_045131.1
-
View
Punica granatum
PGR031G3883
NC_045127.1
+
View
Punica granatum
PGR119G0644
NC_045132.1
+
View
Prunus persica
Prupe.2G243200
Pp02
+
View
Prunus persica
Prupe.6G067000
Pp06
-
View
Prunus persica
Prupe.6G265300
Pp06
+
View
Papaver somniferum
PSO339G4622
NC_039366.1
-
View
Papaver somniferum
PSO384G2375
NC_039368.1
+
View
Populus trichocarpa
Potri.010G195800
Chr10
-
View
Populus trichocarpa
Potri.006G093000
Chr06
+
View
Populus trichocarpa
Potri.016G105000
Chr16
+
View
Populus trichocarpa
Potri.009G038600
Chr09
+
View
Populus trichocarpa
Potri.008G062200
Chr08
+
View
Phaseolus vulgaris
Phvul.008G228300
Chr08
-
View
Phaseolus vulgaris
Phvul.008G113400
Chr08
-
View
Quercus lobata
QL07p027947
7
-
View
Rosa chinensis
RcHm_v2.0_Chr3g0464501
RcHm_v2.0_Chr3
-
View
Rhododendron simsii
Rhsim13G0075900
chr13
-
View
Rhododendron simsii
Rhsim05G0200600
chr05
+
View
Salvia bowleyana
SalBow4G0348
GWHASIU00000008
+
View
Salix brachista
Sabra06G0070700
GWHAAZH00000006
+
View
Salix brachista
Sabra10G0150300
GWHAAZH00000010
-
View
Salix brachista
Sabra16G0104100
GWHAAZH00000016
+
View
Simmondsia chinensis
Sc07g0006950
GWHAASQ00000007
-
View
Simmondsia chinensis
Sc11g0007590
GWHAASQ00000011
-
View
Sechium edule
Sed0021418
LG11
-
View
Sechium edule
Sed0012315
LG04
-
View
Sechium edule
Sed0002927
LG02
+
View
Sechium edule
Sed0025256
LG14
+
View
Solanum lycopersicum
Solyc09g011690.4
TIP41-like protein (AHRD V3.3 *** Q84JE0_ARATH)
SL4.0ch09
+
View
Solanum lycopersicum
Solyc10g084970.2
TIP41-like protein (AHRD V3.3 *-* Q84JE0_ARATH)
SL4.0ch10
+
View
Schrenkiella parvula
Sp5g08400
ch5-1
-
View
Solanum pennellii
Sopen10g034430
unknown protein
Spenn-ch10
+
View
Solanum pennellii
Sopen09g006510
unknown protein
Spenn-ch09
+
View
Solanum tuberosum
PGSC0003DMG400019191
Conserved gene of unknown function
ST4.03ch10
-
View
Solanum tuberosum
PGSC0003DMG400011013
Conserved gene of unknown function
ST4.03ch10
-
View
Solanum tuberosum
PGSC0003DMG400011730
Conserved gene of unknown function
ST4.03ch09
-
View
Selenicereus undatus
Hund16030
Scaffold_33677
-
View
Trochodendron aralioides
TAR369G0362
group18
+
View
Trochodendron aralioides
TAR623G0478
group7
-
View
Theobroma cacao
Thecc.05G027900
Chromosome_5
-
View
Theobroma cacao
Thecc.10G030500
WAS/WASL-interacting protein family member 2
Chromosome_10
-
View
Tarenaya hassleriana
THA.LOC104810062
uncharacterized protein LOC104810062
NW_010965122.1
-
View
Tarenaya hassleriana
THA.LOC104823397
uncharacterized protein LOC104823397
NW_010966881.1
-
View
Tarenaya hassleriana
THA.LOC104805648
uncharacterized protein LOC104805648
NW_010960187.1
+
View
Tarenaya hassleriana
THA.LOC104806538
uncharacterized protein LOC104806538
NW_010962392.1
-
View
Tripterygium wilfordii
TWI77G0372
NC_052236.1
+
View
Tripterygium wilfordii
TWI74G1371
NC_052234.1
-
View
Utricularia gibba
unitig_22.g6581
unitig_22
+
View
Vaccinium macrocarpon
vmacro20201
Protein of unknown function
chr5_Vaccinium_macrocarpon_Stevens_v1
+
View
Vaccinium macrocarpon
vmacro03017
Protein of unknown function
chr9_Vaccinium_macrocarpon_Stevens_v1
-
View
Vigna mungo
VMungo0647G0267
CM024073.1
+
View
Vigna mungo
VMungo1383G0733
CM024070.1
+
View
Vigna mungo
VMungo1383G1773
CM024070.1
-
View
Vanilla planifolia
HPP92_018162
CM028158.1
+
View
Vitis vinifera
GSVIVG01034054001
chr8
+
View
Vitis vinifera
GSVIVG01016431001
chr13
+
View
Vitis vinifera
GSVIVG01024844001
chr6
+
View
Zea mays
Zm00001eb367680
Zm00001e028746
8
-
View
Zea mays
Zm00001eb147910
Zm00001e019273
3
-
View
Zea mays
Zm00001eb347770
Zm00001e026929
8
+
View