Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold110G31216 scaffold110 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G23110 LG-1 + View
Acer truncatum Atru.chr8.2240 chr8 - View
Actinidia chinensis Actinidia29103 Lachesis_group3 + View
Actinidia chinensis Actinidia16094 Lachesis_group24 + View
Actinidia chinensis Actinidia11589 Lachesis_group21 + View
Actinidia chinensis Actinidia20732 Lachesis_group0 + View
Arabidopsis lyrata AL6G10580 scaffold_6 - View
Arabidopsis lyrata AL5G32320 scaffold_5 + View
Arabidopsis lyrata AL4G35190 scaffold_4 - View
Avicennia marina MSTRG.5577 ScioBoG_102839_HRSCAF_103093 + View
Avicennia marina MSTRG.26809 ScioBoG_52287_HRSCAF_52434 - View
Avicennia marina MSTRG.10220 ScioBoG_13798_HRSCAF_13862 + View
Avicennia marina MSTRG.19011 ScioBoG_25048_HRSCAF_25167 + View
Aquilegia oxysepala Aqoxy4G02580 CHR04 + View
Aquilegia oxysepala Aqoxy2G00909 CHR02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.IYM4LN PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED arahy.Tifrunner.gnm1.Arahy.12 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.BE5MC1 K07300 - Ca2+:H+ antiporter (chaA, CAX) arahy.Tifrunner.gnm1.Arahy.14 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.3F1CW3 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED arahy.Tifrunner.gnm1.Arahy.02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.083TJ3 K07300 - Ca2+:H+ antiporter (chaA, CAX) arahy.Tifrunner.gnm1.Arahy.04 - View
Arabidopsis thaliana AT5G01490 cation exchanger 4 Encodes a cation/proton antiporter%2C a member of low affinity calcium antiporter CAX2 family. Involved in root development under metal stress. cation exchanger 4 (CAX4)%3B CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837)%2C Calcium/proton exchanger superfamily (InterPro:IPR004798)%2C Calcium/proton exchanger (InterPro:IPR004713)%3B BEST Arabidopsis thaliana protein match is: cation exchanger 1 (TAIR:AT2G38170.3)%3B Has 3152 Blast hits to 2978 proteins in 994 species: Archae - 25%3B Bacteria - 1749%3B Metazoa - 60%3B Fungi - 737%3B Plants - 238%3B Viruses - 0%3B Other Eukaryotes - 343 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT2G38170 cation exchanger 1 Encodes a high affinity vacuolar calcium antiporter. The residue His 338 is critical to Ca2+ transport activity. Disruption of CAX1 reduces manganese and zinc of shoot tissue and results in a decrease in the activity of vacuolar V-type proton ATPase. cation exchanger 1 (CAX1)%3B FUNCTIONS IN: calcium:cation antiporter activity%2C calcium ion transmembrane transporter activity%2C calcium:hydrogen antiporter activity%3B INVOLVED IN: cold acclimation%2C response to salt stress%2C cellular zinc ion homeostasis%2C cellular manganese ion homeostasis%2C calcium ion transport%3B LOCATED IN: plant-type vacuole membrane%2C vacuolar membrane%2C vacuole%2C membrane%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Sodium/calcium exchanger membrane region (InterPro:IPR004837)%2C Calcium/proton exchanger superfamily (InterPro:IPR004798)%2C Calcium/proton exchanger (InterPro:IPR004713)%3B BEST Arabidopsis thaliana protein match is: cation exchanger 3 (TAIR:AT3G51860.1)%3B Has 3042 Blast hits to 2882 proteins in 950 species: Archae - 18%3B Bacteria - 1703%3B Metazoa - 62%3B Fungi - 722%3B Plants - 217%3B Viruses - 0%3B Other Eukaryotes - 320 (source: NCBI BLink). Chr2 - View
Amborella trichopoda ATR0618G376 AmTr_v1.0_scaffold00029 - View
Brassica carinata BcaC02g07489 ChrC02 + View
Brassica carinata BcaB02g09216 ChrB02 + View
Brassica carinata BcaC02g11957 ChrC02 - View
Brassica napus A05p07860 A05 + View
Brassica napus A04p29240 A04 - View
Brassica napus A10p33740 A10 + View
Brassica napus C04p09510 C04 + View
Brassica napus C04p66470 C04 - View
Brassica oleracea BolC4t28151H C4 - View
Brassica oleracea BolC4t22557H C4 + View
Brassica oleracea BolC9t60198H C9 + View
Brassica rapa BraA05t19752Z A05 + View
Brassica rapa BraA10t45404Z A10 + View
Beta vulgaris EL10Ac5g12567 K07300 - Ca2+:H+ antiporter (chaA, CAX) Chr5_EL10_PGA_scaffold2 + View
Camellia sinensis var. sinensis CSS0036754 Vacuolar cation/proton exchanger 1a, putative [Ricinus communis] Chr10 - View
Cannabis sativa CANSAT35G1350 NC_044378.1 + View
Cicer arietinum L. Ca_07640_v3 Ca_LG3_v3 - View
Corylus avellana Haze_21000 Similar to CAX1: Vacuolar cation/proton exchanger 1 (Arabidopsis thaliana OX%3D3702) 10 - View
Coffea canephora Cc06_g01400 Vacuolar cation/proton exchanger 1 chr6 + View
Citrus clementina Ciclev10011720m.g scaffold_6 - View
Cardamine hirsuta CARHR132770 Vacuolar cation/proton exchanger 1a, putative Chr4 - View
Cardamine hirsuta CARHR211850 Vacuolar cation/proton exchanger 1a, putative Chr6 + View
Carya illinoinensis CiPaw.14G059800 PTHR31503//PTHR31503:SF1 - FAMILY NOT NAMED // VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Chr14 + View
Carya illinoinensis CiPaw.10G156400 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Chr10 - View
Carya illinoinensis CiPaw.09G209000 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Chr09 - View
Citrullus lanatus ClCG10G022110 Vacuolar cation/proton exchanger CG_Chr10 - View
Citrullus lanatus ClCG03G000780 Vacuolar cation/proton exchanger 1a, putative CG_Chr03 + View
Citrullus lanatus ClCG04G007020 Vacuolar cation/proton exchanger 1a, putative CG_Chr04 + View
Cucumis melo MELO3C009170.2 vacuolar cation/proton exchanger 3-like chr04 - View
Corchorus olitorius COL.COLO4_14540 Calcium/proton exchanger AWUE01015434.1 + View
Carica papaya Cpa.g.sc11.155 supercontig_11 + View
Chenopodium quinoa AUR62030445 CAX3: Vacuolar cation/proton exchanger 3 C_Quinoa_Scaffold_3973 + View
Chenopodium quinoa AUR62010463 CAX3: Vacuolar cation/proton exchanger 3 C_Quinoa_Scaffold_1280 + View
Capsella rubella Carub.0004s2015 K07300 - Ca2+:H+ antiporter (chaA, CAX) scaffold_4 - View
Capsella rubella Carub.0006s0034 K07300 - Ca2+:H+ antiporter (chaA, CAX) scaffold_6 - View
Cucumis sativus L. CsaV3_4G026260 Vacuolar cation/proton exchanger chr4 - View
Cucumis sativus L. CsaV3_3G033810 Vacuolar cation/proton exchanger chr3 + View
Daucus carota DCAR_015419 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_018704 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_028845 hypothetical protein DCARv2_Chr8 + View
Davidia involucrata Dinv23005 GWHABJS00000021 - View
Davidia involucrata Dinv23103 GWHABJS00000015 - View
Durio zibethinus Duzib106G0778 NW_019168492.1 - View
Durio zibethinus Duzib093G0328 NW_019167937.1 - View
Durio zibethinus Duzib128G0988 NW_019168481.1 - View
Durio zibethinus Duzib150G1221 NW_019167882.1 - View
Durio zibethinus Duzib168G1295 NW_019168159.1 + View
Erigeron canadensis ECA248G0754 Conyza_canadensis_scaffold:9 - View
Erigeron canadensis ECA236G3592 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.A00502 Chr01 - View
Eucalyptus grandis Eucgr.J01913 Chr10 + View
Erythranthe guttata Migut.L02011 scaffold_12 - View
Erythranthe guttata Migut.J00174 scaffold_10 + View
Eutrema salsugineum Thhalv10016611m.g scaffold_10 - View
Eutrema salsugineum Thhalv10013404m.g KOG1397 - Ca2+/H+ antiporter VCX1 and related proteins scaffold_2 - View
Fragaria x ananassa FAN02G3296 K07300 - Ca2+:H+ antiporter (chaA, CAX) Fvb6-4 + View
Fragaria x ananassa FAN05G5120 PTHR31503//PTHR31503:SF1 - FAMILY NOT NAMED // VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Fvb6-3 + View
Fragaria x ananassa FAN14G1512 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Fvb6-1 - View
Fragaria x ananassa FAN09G1008 PF00153//PF01699 - Mitochondrial carrier protein (Mito_carr) // Sodium/calcium exchanger protein (Na_Ca_ex) Fvb6-2 - View
Fragaria x ananassa FAN14G1857 K07300 - Ca2+:H+ antiporter (chaA, CAX) Fvb6-1 - View
Fragaria vesca FvH4_6g11490 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Fvb6 + View
Gossypium hirsutum Gohir.D05G089800 K07300 - Ca2+:H+ antiporter (chaA, CAX) D05 + View
Gossypium hirsutum Gohir.D04G130100 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED D04 - View
Gossypium hirsutum Gohir.A01G227501 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED A01 + View
Gossypium hirsutum Gohir.A05G088800 K07300 - Ca2+:H+ antiporter (chaA, CAX) A05 + View
Gossypium hirsutum Gohir.A09G164900 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED A09 - View
Gossypium hirsutum Gohir.D09G160600 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED D09 - View
Gossypium hirsutum Gohir.A04G090000 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED A04 - View
Gossypium hirsutum Gohir.D01G217300 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED D01 + View
Glycine max Glyma.18G200500 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Gm18 - View
Glycine max Glyma.01G122800 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Gm01 - View
Glycine max Glyma.07G149600 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Gm07 - View
Glycine max Glyma.03G058300 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Gm03 + View
Gossypium raimondii Gorai.006G182300 Chr06 - View
Gossypium raimondii Gorai.002G263600 Chr02 + View
Gossypium raimondii Gorai.012G113600 Chr12 - View
Gossypium raimondii Gorai.009G092200 Chr09 + View
Lupinus albus Lalb_Chr03g0043291 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Lalb_Chr03 + View
Lotus japonicus LjContig00155g0020069 K07300 - Ca2+:H+ antiporter (chaA, CAX) Contig00155 + View
Lotus japonicus Lj1g0009913 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED chr1 + View
Lonicera japonica Lj2A75T36 GWHAAZE00000002 + View
Lonicera japonica Lj1A138T71 GWHAAZE00000001 + View
Lonicera japonica Lj3A953T55 GWHAAZE00000003 + View
Lactuca sativa Lsat_1_v5_gn_8_102180 Lsat_1_v8_lg_8 + View
Magnolia biondii MBI14_g11282_MAGBIO AED:0.20 Chr14 - View
Magnolia biondii MBI05_g05308_MAGBIO AED:0.12 Chr05 - View
Malus domestica MD04G1151600 cation exchanger 3 Chr04 - View
Malus domestica MD12G1165800 cation exchanger 3 Chr12 - View
Manihot esculenta Manes.08G092100 Chromosome08 - View
Manihot esculenta Manes.02G119600 Chromosome02 + View
Manihot esculenta Manes.09G103700 Chromosome09 - View
Medicago truncatula Medtr7g068380 vacuolar cation/proton exchanger 3 chr7 - View
Nelumbo nucifera Nn2g11477 chr2 - View
Petunia axillaris Peaxi162Scf00141g00927 Vacuolar cation/proton exchanger 3 Peaxi162Scf00141 - View
Punica granatum PGR031G3540 NC_045127.1 + View
Prunus persica Prupe.6G276800 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Pp06 - View
Papaver somniferum PSO339G3742 NC_039366.1 + View
Papaver somniferum PSO384G4309 NC_039368.1 - View
Populus trichocarpa Potri.006G099900 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Chr06 - View
Populus trichocarpa Potri.016G115500 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Chr16 - View
Phaseolus vulgaris Phvul.010G001500 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Chr10 + View
Phaseolus vulgaris Phvul.008G261500 K07300 - Ca2+:H+ antiporter (chaA, CAX) Chr08 + View
Phaseolus vulgaris Phvul.008G104500 PTHR31503:SF1 - VACUOLAR CATION/PROTON EXCHANGER 1-RELATED Chr08 + View
Quercus lobata QL07p035739 7 + View
Rosa chinensis RcHm_v2.0_Chr3g0463181 RcHm_v2.0_Chr3 + View
Rhododendron simsii Rhsim13G0069600 chr13 + View
Rhododendron simsii Rhsim05G0214700 chr05 - View
Salvia bowleyana SalBow5G5084 GWHASIU00000003 + View
Salix brachista Sabra16G0111400 GWHAAZH00000016 - View
Salix brachista Sabra06G0076800 GWHAAZH00000006 - View
Simmondsia chinensis Sc01g0006470 GWHAASQ00000001 + View
Simmondsia chinensis Sc22g0002490 GWHAASQ00000022 - View
Sechium edule Sed0015413 LG03 - View
Sechium edule Sed0000289 LG02 - View
Sapria himalayana SHI12830 scaffold11_13529635 - View
Schrenkiella parvula Sp4g20490 K07300 - Ca2+:H+ antiporter (chaA, CAX) ch4-6 - View
Schrenkiella parvula Sp6g40770 K07300 - Ca2+:H+ antiporter (chaA, CAX) ch6-6 + View
Solanum tuberosum PGSC0003DMG400011787 Vacuolar cation/proton exchanger 1a ST4.03ch09 + View
Selenicereus undatus Hund11013 Scaffold_10417 - View
Trochodendron aralioides TAR623G1427 group7 - View
Trochodendron aralioides TAR636G3607 group1 + View
Trochodendron aralioides TAR633G0602 group2 - View
Theobroma cacao Thecc.05G016500 Vacuolar cation/proton exchanger 3 Chromosome_5 + View
Tarenaya hassleriana THA.LOC104805869 vacuolar cation/proton exchanger 3 isoform X2 NW_010960187.1 - View
Trifolium pratense TPR.G8129 Tp57577_TGAC_v2_scaf_282 - View
Trifolium pratense TPR.G13343 Tp57577_TGAC_v2_LG4 + View
Tripterygium wilfordii TWI74G1548 NC_052234.1 + View
Tripterygium wilfordii TWI77G0517 NC_052236.1 - View
Utricularia gibba unitig_26.g9091 unitig_26 - View
Vaccinium macrocarpon vmacro02962 Similar to CAX1: Vacuolar cation/proton exchanger 1 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro20261 Similar to CAX3: Vacuolar cation/proton exchanger 3 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G2692 CM024070.1 + View
Vigna mungo VMungo0331G0939 CM024078.1 + View
Vitis vinifera GSVIVG01033962001 chr8 - View