Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold114G31883 scaffold114 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G1000 LG-11 + View
Acer truncatum Atru.chr9.2337 chr9 + View
Actinidia chinensis Actinidia34975 Lachesis_group2 - View
Actinidia chinensis Actinidia37665 Lachesis_group13 + View
Actinidia chinensis Actinidia04931 Lachesis_group1 - View
Arabidopsis lyrata AL5G27220 scaffold_5 - View
Avicennia marina MSTRG.11404 ScioBoG_14204_HRSCAF_14270 + View
Amaranthus hybridus Ah.02g113120 AmaHy_arrow1_Scaffold_2 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DV6TYS PTHR22975:SF9 - F6D8.33-RELATED arahy.Tifrunner.gnm1.Arahy.01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LMB17M PTHR22975:SF9 - F6D8.33-RELATED arahy.Tifrunner.gnm1.Arahy.11 - View
Arabidopsis thaliana AT3G47890 Ubiquitin carboxyl-terminal hydrolase-related protein Ubiquitin carboxyl-terminal hydrolase-related protein%3B FUNCTIONS IN: ubiquitin thiolesterase activity%2C zinc ion binding%3B INVOLVED IN: ubiquitin-dependent protein catabolic process%3B LOCATED IN: intracellular%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF627 (InterPro:IPR006866)%2C Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%2C Protein of unknown function DUF629 (InterPro:IPR006865)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase-related protein (TAIR:AT3G47910.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr3 - View
Capsicum annuum CAN.G628.49 PGAv.1.6.scaffold628 + View
Cicer arietinum L. Ca_21858_v3 Ca_LG7_v3 + View
Corylus avellana Haze_07394 Protein of unknown function 4 + View
Coffea canephora Cc04_g15870 Ubiquitin carboxyl-terminal hydrolase-related protein chr4 + View
Citrus clementina Ciclev10018472m.g scaffold_3 + View
Carpinus fangiana Cfa019014 Cfa08 + View
Cardamine hirsuta CARHR156620 Ubiquitin carboxyl-terminal hydrolase-related protein Chr5 - View
Carya illinoinensis CiPaw.11G036500 PF00443//PF04780 - Ubiquitin carboxyl-terminal hydrolase (UCH) // Protein of unknown function (DUF629) (DUF629) Chr11 + View
Citrullus lanatus ClCG06G016460 Ubiquitin carboxyl-terminal hydrolase family protein CG_Chr06 + View
Cucumis melo MELO3C017148.2 Ubiquitin carboxyl-terminal hydrolase-related protein chr02 + View
Chenopodium quinoa AUR62021754 Usp54: Inactive ubiquitin carboxyl-terminal hydrolase 54 C_Quinoa_Scaffold_1675 + View
Cucumis sativus L. CsaV3_1G002070 Ubiquitin carboxyl-terminal hydrolase-related protein chr1 - View
Daucus carota DCAR_021541 hypothetical protein DCARv2_Chr6 - View
Daucus carota DCAR_026083 hypothetical protein DCARv2_Chr7 + View
Davidia involucrata Dinv19903 GWHABJS00000006 + View
Durio zibethinus Duzib205G1945 NW_019168381.1 - View
Durio zibethinus Duzib068G1318 NW_019167838.1 - View
Eucalyptus grandis Eucgr.B00398 Chr02 - View
Eucalyptus grandis Eucgr.K02911 Chr11 - View
Eutrema salsugineum Thhalv10010059m.g KOG1887 - Ubiquitin carboxyl-terminal hydrolase scaffold_16 + View
Fragaria x ananassa FAN08G2604 PTHR22975:SF9 - F6D8.33-RELATED Fvb5-3 - View
Fragaria x ananassa FAN13G0464 PTHR22975:SF9 - F6D8.33-RELATED Fvb5-2 + View
Fragaria x ananassa FAN04G1134 PTHR22975//PTHR22975:SF9 - UBIQUITIN SPECIFIC PROTEINASE // F6D8.33-RELATED Fvb5-4 + View
Gossypium hirsutum Gohir.A03G064400 PTHR22975:SF9 - F6D8.33-RELATED A03 - View
Gossypium hirsutum Gohir.D03G090700 PTHR22975:SF9 - F6D8.33-RELATED D03 - View
Glycine max Glyma.17G095800 PTHR22975 - UBIQUITIN SPECIFIC PROTEINASE Gm17 - View
Glycine max Glyma.05G031000 PTHR22975 - UBIQUITIN SPECIFIC PROTEINASE Gm05 + View
Helianthus annuus HanXRQChr05g0155261 Putative domain of unknown function DUF627, N-terminal; Zinc finger, C2H2; Tetratricopeptide-like helical domain; Ubiquitin specific protease domain HanXRQChr05 - View
Hydrangea macrophylla Hma1.2p1_0002F.1_g003390 Hma1.2p1_0002F.1 + View
Hydrangea macrophylla Hma1.2p1_0104F.1_g050400 Hma1.2p1_0104F.1 + View
Lupinus albus Lalb_Chr13g0298141 PTHR22975//PTHR22975:SF9 - UBIQUITIN SPECIFIC PROTEINASE // F6D8.33-RELATED Lalb_Chr13 - View
Lupinus albus Lalb_Chr12g0201211 PTHR22975:SF9 - F6D8.33-RELATED Lalb_Chr12 + View
Lotus japonicus Lj1g0021908 PTHR22975//PTHR22975:SF9 - UBIQUITIN SPECIFIC PROTEINASE // F6D8.33-RELATED chr1 + View
Lotus japonicus Lj4g0028007 KOG1887 - Ubiquitin carboxyl-terminal hydrolase chr4 + View
Lonicera japonica Lj5C117T8 GWHAAZE00000005 + View
Lonicera japonica Lj9C457G12 GWHAAZE00000009 - View
Malus domestica MD06G1185800 Ubiquitin carboxyl-terminal hydrolase-related protein Chr06 - View
Malus domestica MD14G1192000 Ubiquitin carboxyl-terminal hydrolase-related protein Chr14 - View
Manihot esculenta Manes.14G073702 Chromosome14 - View
Manihot esculenta Manes.06G097300 Chromosome06 + View
Medicago truncatula Medtr4g107470 ubiquitin carboxyl-terminal hydrolase-like protein chr4 - View
Nelumbo nucifera Nn3g17102 chr3 - View
Olea europaea Oeu039544.2 chr10 + View
Petunia axillaris Peaxi162Scf00689g00564 Ubiquitin carboxyl-terminal hydrolase-related protein Peaxi162Scf00689 - View
Punica granatum PGR083G2262 NC_045133.1 + View
Prunus persica Prupe.5G184600 Pp05 - View
Pisum sativum Psat4g054160 Protein of unknown function (DUF629) chr4LG4 + View
Populus trichocarpa Potri.012G071900 PTHR22975//PTHR22975:SF9//PTHR34465//PTHR34465:SF2 - UBIQUITIN SPECIFIC PROTEINASE // F6D8.33-RELATED // FAMILY NOT NAMED // SUBFAMILY NOT NAMED Chr12 + View
Populus trichocarpa Potri.015G066500 PTHR22975//PTHR22975:SF9 - UBIQUITIN SPECIFIC PROTEINASE // F6D8.33-RELATED Chr15 + View
Phaseolus vulgaris Phvul.003G194200 PTHR22975 - UBIQUITIN SPECIFIC PROTEINASE Chr03 + View
Quercus lobata QL10p014874 10 - View
Rhododendron simsii Rhsim08G0161300 chr08 + View
Salvia bowleyana SalBow7G0691 GWHASIU00000005 + View
Salix brachista Sabra15G0091600 GWHAAZH00000015 + View
Salix brachista Sabra12G0051100 GWHAAZH00000012 + View
Simmondsia chinensis Sc04g0002330 GWHAASQ00000004 - View
Sechium edule Sed0025522 LG12 - View
Solanum lycopersicum Solyc06g071120.3 Ubiquitin carboxyl-terminal hydrolase-related protein (AHRD V3.3 *** F4JCR3_ARATH) SL4.0ch06 + View
Solanum lycopersicum Solyc03g113370.3 Ubiquitin carboxyl-terminal hydrolase-like protein (AHRD V3.3 *** A0A2K3NQ17_TRIPR) SL4.0ch03 - View
Schrenkiella parvula Sp5g14040 PF00443//PF04780//PF04781 - Ubiquitin carboxyl-terminal hydrolase (UCH) // Protein of unknown function (DUF629) (DUF629) // Protein of unknown function (DUF627) (DUF627) ch5-1 + View
Solanum pennellii Sopen06g027420 Ubiquitin carboxyl-terminal hydrolase-related protein | FUNCTIONS IN: ubiquitin thiolesterase activity, zinc ion binding | INVOLVED IN: ubiquitin-dependent protein catabolic process | LOCATED IN: intracellular | EXPRESSED IN: cultured cell | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF627 , Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 , Zinc finger, C2H2-type , Protein of unknown function DUF629 | BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase-related protein Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400033067 Ubiquitin thiolesterase/ zinc ion binding ST4.03ch06 + View
Solanum tuberosum PGSC0003DMG400013181 Ubiquitin thiolesterase/ zinc ion binding ST4.03ch03 - View
Selenicereus undatus Hund02679 Scaffold_33678 + View
Selenicereus undatus Hund09373 Scaffold_10417 + View
Trochodendron aralioides TAR622G0827 group8 + View
Theobroma cacao Thecc.03G077100 Ubiquitin carboxyl-terminal hydrolase-related protein Chromosome_3 - View
Tripterygium wilfordii TWI81G0197 NC_052251.1 - View
Tripterygium wilfordii TWI60G1556 NC_052246.1 + View
Vaccinium macrocarpon vmacro19421 Similar to Usp54: Inactive ubiquitin carboxyl-terminal hydrolase 54 (Mus musculus OX%3D10090) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro05744 Similar to USP53: Inactive ubiquitin carboxyl-terminal hydrolase 53 (Homo sapiens OX%3D9606) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1215G0372 CM024074.1 - View