Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold186G40167 scaffold186 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G1690 LG-4 - View
Aethionema arabicum Aa31LG7G960 LG-7 - View
Acer truncatum Atru.chr1.21 chr1 + View
Avicennia marina MSTRG.7099 ScioBoG_102840_HRSCAF_103099 - View
Arabidopsis thaliana AT1G79310 metacaspase 7 Encodes a putative metacaspase. Arabidopsis contains three type I MCP genes (MCP1a-c) and six type II MCP genes (MCP2a%E2%80%93f): AtMCP1a/At5g64240%2C AtMCP1b/At1g02170%2C AtMCP1c/At4g25110%2C AtMCP2a/At1g79310%2C AtMCP2b/At1g79330%2C AtMCP2c/At1g79320%2C AtMCP2d/At1g79340%2C AtMCP2e/At1g16420%2C AtMCP2f/At5g04200. metacaspase 7 (MC7)%3B FUNCTIONS IN: cysteine-type endopeptidase activity%3B INVOLVED IN: proteolysis%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: hypocotyl%2C male gametophyte%2C root%3B CONTAINS InterPro DOMAIN/s: Peptidase C14%2C caspase catalytic (InterPro:IPR011600)%3B BEST Arabidopsis thaliana protein match is: metacaspase 4 (TAIR:AT1G79340.1)%3B Has 1196 Blast hits to 1169 proteins in 284 species: Archae - 7%3B Bacteria - 340%3B Metazoa - 0%3B Fungi - 299%3B Plants - 319%3B Viruses - 0%3B Other Eukaryotes - 231 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaB02g07210 ChrB02 + View
Brassica carinata BcaC08g45364 ChrC08 - View
Brassica napus C06p29950 C06 - View
Brassica napus A07p27190 A07 - View
Brassica oleracea BolC6t38156H C6 - View
Brassica oleracea BolC6t40337H C6 + View
Brassica rapa BraA02t07277Z A02 + View
Camellia sinensis var. sinensis CSS0030714 Caspase, putative [Theobroma cacao] Chr7 - View
Citrus clementina Ciclev10006644m.g scaffold_9 - View
Cardamine hirsuta CARHR072960 metacaspase 7 Chr2 + View
Capsella rubella Carub.0002s2616 PTHR31810:SF6 - METACASPASE-4-RELATED scaffold_2 + View
Daucus carota DCAR_019907 hypothetical protein DCARv2_Chr6 - View
Erythranthe guttata Migut.H01652 scaffold_8 + View
Erythranthe guttata Migut.M01495 scaffold_13 + View
Eutrema salsugineum Thhalv10018618m.g PTHR31810:SF6 - METACASPASE-4-RELATED scaffold_9 - View
Eutrema salsugineum Thhalv10007917m.g PTHR31810:SF6 - METACASPASE-4-RELATED scaffold_5 + View
Fragaria x ananassa FAN25G2511 PTHR31810//PTHR31810:SF6 - FAMILY NOT NAMED // METACASPASE-4-RELATED Fvb3-1 - View
Fragaria x ananassa FAN21G0824 PTHR31810:SF6 - METACASPASE-4-RELATED Fvb3-2 + View
Fragaria x ananassa FAN16G0794 PTHR31810:SF6 - METACASPASE-4-RELATED Fvb3-3 + View
Fragaria vesca FvH4_3g13930 PTHR31810:SF6 - METACASPASE-4-RELATED Fvb3 + View
Gossypium hirsutum Gohir.D13G130500 PTHR31810:SF6 - METACASPASE-4-RELATED D13 - View
Gossypium hirsutum Gohir.A13G126850 PTHR31810:SF6 - METACASPASE-4-RELATED A13 - View
Gossypium raimondii Gorai.013G146600 Chr13 - View
Lupinus albus Lalb_Chr25g0284241 PTHR31810//PTHR31810:SF6 - FAMILY NOT NAMED // METACASPASE-4-RELATED Lalb_Chr25 + View
Lonicera japonica Lj2C7T6 GWHAAZE00000002 + View
Malus domestica MD10G1218100 metacaspase 4 Chr10 - View
Olea europaea Oeu025994.1 chr13 + View
Punica granatum PGR031G3914 NC_045127.1 + View
Prunus persica Prupe.4G126000 PTHR31810:SF6 - METACASPASE-4-RELATED Pp04 + View
Populus trichocarpa Potri.010G175000 PTHR31810:SF6 - METACASPASE-4-RELATED Chr10 - View
Populus trichocarpa Potri.008G081100 PTHR31810:SF6 - METACASPASE-4-RELATED Chr08 + View
Phaseolus vulgaris Phvul.005G046100 PTHR31810:SF6 - METACASPASE-4-RELATED Chr05 + View
Phaseolus vulgaris Phvul.011G180200 PTHR31810:SF6 - METACASPASE-4-RELATED Chr11 - View
Quercus lobata QL04p095775 4 - View
Rosa chinensis RcHm_v2.0_Chr5g0023131 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim04G0003600 chr04 - View
Salix brachista Sabra08G0060400 GWHAAZH00000008 + View
Salix brachista Sabra10G0134800 GWHAAZH00000010 - View
Schrenkiella parvula Sp5g34380 PTHR31810:SF6 - METACASPASE-4-RELATED ch5-7 + View
Tripterygium wilfordii TWI38G1380 NC_052252.1 + View
Utricularia gibba unitig_748.g7853 unitig_748 - View
Vaccinium macrocarpon vmacro09763 Similar to AMC4: Metacaspase-4 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01036702001 chr19 - View