Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold49G18175 scaffold49 - View
SGA_v2.0_scaffold239G44053 scaffold239 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G1890 LG-4 - View
Actinidia chinensis Actinidia12790 Lachesis_group19 - View
Actinidia chinensis Actinidia07355 Lachesis_group10 + View
Arabidopsis lyrata AL2G39580 scaffold_2 + View
Arabidopsis lyrata AL3G24600 scaffold_3 - View
Avicennia marina MSTRG.7063 ScioBoG_102840_HRSCAF_103099 - View
Avicennia marina MSTRG.16109 ScioBoG_19538_HRSCAF_19626 + View
Avicennia marina MSTRG.13066 ScioBoG_17730_HRSCAF_17811 - View
Avicennia marina MSTRG.14543 ScioBoG_18782_HRSCAF_18867 - View
Aquilegia oxysepala Aqoxy1G01471 CHR01 - View
Arabidopsis thaliana AT1G79110 zinc ion binding protein Encodes one of the BRGs (BOI-related gene) involved in resistance to Botrytis cinerea. zinc ion binding%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT3G12920.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). zinc ion binding%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: SBP (S-ribonuclease binding protein) family protein (TAIR:AT3G12920.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT3G12920 SBP (S-ribonuclease binding protein) family protein Encodes one of the BRGs (BOI-related gene) involved in resistance to Botrytis cinerea. SBP (S-ribonuclease binding protein) family protein%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C S-ribonuclease binding protein%2C SBP1%2C pollen (InterPro:IPR017066)%3B BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G79110.2)%3B Has 1634 Blast hits to 1631 proteins in 159 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 874%3B Fungi - 0%3B Plants - 566%3B Viruses - 36%3B Other Eukaryotes - 158 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC08g45381 ChrC08 - View
Brassica carinata BcaC09g48279 ChrC09 - View
Brassica carinata BcaC01g04044 ChrC01 - View
Brassica napus A01p40610 A01 + View
Brassica napus C05p55000 C05 + View
Brassica napus C03p45950 C03 - View
Brassica napus A03p37880 A03 - View
Brassica oleracea BolC6t38175H C6 - View
Brassica oleracea BolC3t16871H C3 - View
Brassica oleracea BolC5t34169H C5 + View
Brassica rapa BraA03t12943Z A03 - View
Brassica rapa BraA05t22457Z A05 + View
Camellia sinensis var. sinensis CSS0037080 PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 [Sesamum indicum] Chr7 - View
Cannabis sativa CANSAT80G1812 NC_044372.1 - View
Corylus avellana Haze_08542 Similar to BRG3: Probable BOI-related E3 ubiquitin-protein ligase 3 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc05_g16100 Putative SBP (S-ribonuclease binding protein) family protein chr5 + View
Carpinus fangiana Cfa019422 Cfa08 - View
Citrullus lanatus ClCG09G022560 SBP (S-ribonuclease binding protein) family protein LENGTH=335 CG_Chr09 + View
Cucumis melo MELO3C019673.2 BOI-related E3 ubiquitin-protein ligase 1-like chr11 + View
Cucumis melo MELO3C012628.2 BOI-related E3 ubiquitin-protein ligase 1-like chr01 - View
Capsella rubella Carub.0002s2597 K19042 - E3 ubiquitin-protein ligase BOI and related proteins [EC:6.3.2.19] (BOI) scaffold_2 + View
Cucumis sativus L. CsaV3_7G022700 BOI-related E3 ubiquitin-protein ligase chr7 + View
Daucus carota DCAR_019929 hypothetical protein DCARv2_Chr6 + View
Daucus carota DCAR_016823 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_013736 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv19615 GWHABJS00000001 + View
Durio zibethinus Duzib187G0374 NW_019167860.1 - View
Durio zibethinus Duzib268G1751 NW_019168270.1 - View
Erigeron canadensis ECA240G1591 Conyza_canadensis_scaffold:5 + View
Erigeron canadensis ECA236G1613 Conyza_canadensis_scaffold:3 + View
Erythranthe guttata Migut.H01690 scaffold_8 + View
Erythranthe guttata Migut.M01553 scaffold_13 + View
Fragaria x ananassa FAN21G2216 KOG1100 - Predicted E3 ubiquitin ligase Fvb3-2 - View
Fragaria x ananassa FAN25G0120 PTHR10044//PTHR10044:SF107 - INHIBITOR OF APOPTOSIS // BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 3-RELATED Fvb3-1 + View
Fragaria vesca FvH4_3g15670 PTHR10044//PTHR10044:SF107 - INHIBITOR OF APOPTOSIS // BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 3-RELATED Fvb3 - View
Gossypium hirsutum Gohir.D01G027200 PTHR10044//PTHR10044:SF107 - INHIBITOR OF APOPTOSIS // BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 3-RELATED D01 + View
Gossypium hirsutum Gohir.A01G039400 K19042 - E3 ubiquitin-protein ligase BOI and related proteins [EC:6.3.2.19] (BOI) A01 + View
Glycine max Glyma.15G256500 PTHR10044//PTHR10044:SF107 - INHIBITOR OF APOPTOSIS // BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 3-RELATED Gm15 + View
Glycine max Glyma.08G170400 PTHR10044//PTHR10044:SF107 - INHIBITOR OF APOPTOSIS // BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 3-RELATED Gm08 - View
Gossypium raimondii Gorai.002G036500 Chr02 + View
Lupinus albus Lalb_Chr25g0284931 PTHR10044:SF107 - BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 3-RELATED Lalb_Chr25 - View
Lotus japonicus Lj3g0023915 PTHR10044:SF107 - BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 3-RELATED chr3 - View
Lotus japonicus Lj3g0017383 PTHR10044//PTHR10044:SF107 - INHIBITOR OF APOPTOSIS // BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 3-RELATED chr3 - View
Lonicera japonica Lj1C906T2 GWHAAZE00000001 + View
Lonicera japonica Lj8C188T4 GWHAAZE00000008 + View
Lactuca sativa Lsat_1_v5_gn_7_112340 PTHR10044:SF107 - BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 3-RELATED Lsat_1_v8_lg_7 - View
Malus domestica MD10G1202900 SBP (S-ribonuclease binding protein) family protein Chr10 + View
Manihot esculenta Manes.06G172200 Chromosome06 + View
Manihot esculenta Manes.14G016800 Chromosome14 - View
Olea europaea Oeu051668.1 chr21 - View
Punica granatum PGR031G0818 NC_045127.1 - View
Prunus persica Prupe.4G139400 K19042 - E3 ubiquitin-protein ligase BOI and related proteins [EC:6.3.2.19] (BOI) Pp04 - View
Phaseolus vulgaris Phvul.011G174600 K19042 - E3 ubiquitin-protein ligase BOI and related proteins [EC:6.3.2.19] (BOI) Chr11 - View
Rosa chinensis RcHm_v2.0_Chr5g0026341 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim06G0239200 chr06 + View
Rhododendron simsii Rhsim04G0005700 chr04 - View
Sechium edule Sed0011131 LG01 + View
Sechium edule Sed0002037 LG05 - View
Sechium edule Sed0004643 LG04 + View
Schrenkiella parvula Sp5g34160 PTHR10044:SF107 - BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 3-RELATED ch5-7 + View
Selenicereus undatus Hund12459 Scaffold_33679 + View
Tripterygium wilfordii TWI39G1106 NC_052250.1 - View
Tripterygium wilfordii TWI38G0932 NC_052252.1 + View
Utricularia gibba unitig_26.g10076 unitig_26 + View
Vaccinium macrocarpon vmacro11668 Similar to BRG3: Probable BOI-related E3 ubiquitin-protein ligase 3 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1080G0624 CM024079.1 - View