Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G14330 LG-10 - View
Acer truncatum Atru.chr5.36 chr5 - View
Actinidia chinensis Actinidia05793 Lachesis_group20 + View
Actinidia chinensis Actinidia03396 Lachesis_group23 + View
Actinidia chinensis Actinidia30958 Lachesis_group0 + View
Avicennia marina MSTRG.4965 ScioBoG_102838_HRSCAF_103081 + View
Avicennia marina MSTRG.28129 ScioBoG_94932_HRSCAF_95134 - View
Avicennia marina MSTRG.20660 ScioBoG_26180_HRSCAF_26306 - View
Arabidopsis thaliana AT3G60190 DYNAMIN-like 1E At3g60190 encodes Arabidopsis dynamin-related protein 1E%2C DRP1E%2C also known as EDR3%2C ADL4 and ADL1E%2C which is 624 amino acid residues long%2C has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1)%2C consisting of five members in Arabidopsis (A%2C B%2C C%2C D%2C E). This class is characterized by having an N-terminal GTPase domain%2C a central %E2%80%98dynamin 2%E2%80%98 domain and a C-terminal GTPase effector domain (GED)%2C a typical structure for plant dynamin-related proteins. However%2C this class lacks a PH domain and a proline-rich domain%2C which are found in classical animal dynamin-like proteins. Based on work on animal dynamins%2C the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles%2C processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection. DYNAMIN-like 1E (DL1E)%3B FUNCTIONS IN: GTP binding%2C GTPase activity%3B INVOLVED IN: response to cadmium ion%2C vesicle-mediated transport%2C defense response to fungus%3B LOCATED IN: mitochondrion%2C plasma membrane%2C vacuole%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector (InterPro:IPR003130)%2C Dynamin%2C GTPase domain (InterPro:IPR001401)%2C Dynamin%2C GTPase region%2C conserved site (InterPro:IPR019762)%2C GTPase effector domain%2C GED (InterPro:IPR020850)%2C Dynamin central region (InterPro:IPR000375)%3B BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D (TAIR:AT2G44590.3)%3B Has 2915 Blast hits to 2753 proteins in 324 species: Archae - 2%3B Bacteria - 53%3B Metazoa - 1058%3B Fungi - 869%3B Plants - 577%3B Viruses - 0%3B Other Eukaryotes - 356 (source: NCBI BLink). Chr3 - View
Beta vulgaris EL10Ac1g00708 PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C Chr1_EL10_PGA_scaffold3 + View
Camellia sinensis var. sinensis CSS0034612 hypothetical protein JCGZ_14684 [Jatropha curcas] Contig225 - View
Capsicum annuum CAN.G756.10 PGAv.1.6.scaffold756 - View
Cannabis sativa CANSAT25G2662 NC_044370.1 + View
Cicer arietinum L. Ca_23145_v3 Ca_LG7_v3 + View
Corylus avellana Haze_02913 Similar to DRP1E: Dynamin-related protein 1E (Arabidopsis thaliana OX%3D3702) 1 + View
Coffea canephora Cc02_g25720 Dynamin-related protein 1E chr2 + View
Citrus clementina Ciclev10019323m.g scaffold_3 + View
Cardamine hirsuta CARHR170510 DYNAMIN-like 1E Chr5 - View
Carya illinoinensis CiPaw.12G059800 PTHR11566//PTHR11566:SF77 - DYNAMIN // SUBFAMILY NOT NAMED Chr12 + View
Carya illinoinensis CiPaw.13G021000 K01528 - dynamin GTPase (DNM) Chr13 + View
Citrullus lanatus ClCG05G002830 Dynamin, putative CG_Chr05 - View
Citrullus lanatus ClCG09G012390 Dynamin, putative CG_Chr09 - View
Cucumis melo MELO3C003370.2 dynamin-related protein 1E-like chr04 + View
Cucumis melo MELO3C006260.2 Dynamin, putative chr06 - View
Carica papaya Cpa.g.sc52.64 supercontig_52 - View
Chenopodium quinoa AUR62013798 DRP1E: Dynamin-related protein 1E C_Quinoa_Scaffold_1412 - View
Chenopodium quinoa AUR62023360 DRP1E: Dynamin-related protein 1E C_Quinoa_Scaffold_1352 + View
Cucumis sativus L. CsaV3_3G049560 Dynamin, putative chr3 - View
Cucumis sativus L. CsaV3_3G010360 Dynamin, putative chr3 - View
Daucus carota DCAR_003284 hypothetical protein DCARv2_Chr1 - View
Daucus carota DCAR_015775 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv44012 GWHABJS00000020 - View
Davidia involucrata Dinv43583 GWHABJS00000016 - View
Davidia involucrata Dinv28909 GWHABJS00000003 + View
Durio zibethinus Duzib205G0268 NW_019168381.1 - View
Durio zibethinus Duzib128G0776 NW_019168481.1 - View
Erigeron canadensis ECA236G1449 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.D01169 Chr04 - View
Erythranthe guttata Migut.N01710 scaffold_14 - View
Erythranthe guttata Migut.B01478 scaffold_2 - View
Eutrema salsugineum Thhalv10005838m.g PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C scaffold_19 + View
Eutrema salsugineum Thhalv10001749m.g PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C scaffold_22 - View
Fragaria x ananassa FAN10G3282 PTHR11566//PTHR11566:SF80 - DYNAMIN // DYNAMIN-RELATED PROTEIN 1C Fvb7-1 - View
Fragaria x ananassa FAN06G2893 PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C Fvb7-2 + View
Fragaria x ananassa FAN03G2146 PTHR11566//PTHR11566:SF80 - DYNAMIN // DYNAMIN-RELATED PROTEIN 1C Fvb7-3 - View
Gossypium hirsutum Gohir.A12G211300 PTHR11566//PTHR11566:SF77 - DYNAMIN // SUBFAMILY NOT NAMED A12 - View
Glycine max Glyma.03G102800 PTHR11566//PTHR11566:SF80 - DYNAMIN // DYNAMIN-RELATED PROTEIN 1C Gm03 - View
Glycine max Glyma.17G151800 K01528 - dynamin GTPase (DNM) Gm17 - View
Glycine max Glyma.05G069150 PTHR11566//PTHR11566:SF77 - DYNAMIN // SUBFAMILY NOT NAMED Gm05 - View
Lupinus albus Lalb_Chr16g0386161 K01528 - dynamin GTPase (DNM) Lalb_Chr16 + View
Lotus japonicus Lj3g0025908 PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C chr3 + View
Lonicera japonica Lj9C549T4 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_7_11601 Lsat_1_v8_lg_7 - View
Malus domestica MD07G1087500 DYNAMIN-like 1E Chr07 + View
Malus domestica MD02G1226500 DYNAMIN-like 1E Chr02 - View
Manihot esculenta Manes.05G059400 Chromosome05 + View
Medicago truncatula Medtr8g009510 dynamin 1E-like protein chr8 + View
Medicago truncatula Medtr4g098920 dynamin-like protein 1E chr4 + View
Nelumbo nucifera Nn1g00630 chr1 + View
Nicotiana tabacum Nitab4.5_0004088g0090 Dynamin, GTPase domain, Dynamin superfamily, Dynamin central domain, Dynamin GTPase effector, GTPase effector domain, GED, Dynamin, GTPase region, conserved site, P-loop containing nucleoside triphosphate hydrolase Nitab4.5_0004088 + View
Olea europaea Oeu037406.1 chr3 - View
Petunia axillaris Peaxi162Scf00103g01918 DYNAMIN-like 1E Peaxi162Scf00103 + View
Papaver somniferum PSO782G3801 NC_039365.1 + View
Populus trichocarpa Potri.014G043600 PTHR11566//PTHR11566:SF77 - DYNAMIN // SUBFAMILY NOT NAMED Chr14 - View
Phaseolus vulgaris Phvul.003G228100 PTHR11566//PTHR11566:SF77 - DYNAMIN // SUBFAMILY NOT NAMED Chr03 - View
Phaseolus vulgaris Phvul.010G040900 PTHR11566:SF80 - DYNAMIN-RELATED PROTEIN 1C Chr10 - View
Quercus lobata QL04p025889 4 - View
Rhododendron simsii Rhsim07G0039700 chr07 + View
Salvia bowleyana SalBow5G5211 GWHASIU00000003 - View
Salvia bowleyana SalBow4G2063 GWHASIU00000008 + View
Sechium edule Sed0022580 LG01 + View
Sechium edule Sed0027891 LG12 - View
Solanum lycopersicum Solyc01g088520.3 Dynamin-related protein 1E (AHRD V3.3 *-* A0A1U8EK16_CAPAN) SL4.0ch01 - View
Schrenkiella parvula Sp5g03020 PTHR11566//PTHR11566:SF80 - DYNAMIN // DYNAMIN-RELATED PROTEIN 1C ch5-1 + View
Solanum pennellii Sopen01g035380 At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection. | DYNAMIN-like 1E (DL1E) | FUNCTIONS IN: GTP binding, GTPase activity | INVOLVED IN: response to cadmium ion, vesicle-mediated transport, defense response to fungus | LOCATED IN: mitochondrion, plasma membrane, vacuole | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Dynamin GTPase effector , Dynamin, GTPase domain , Dynamin, GTPase region, conserved site , GTPase effector domain, GED , Dynamin central region | BEST Arabidopsis thaliana protein match is: DYNAMIN-like 1D Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400001682 Dynamin ST4.03ch01 + View
Trochodendron aralioides TAR375G0797 group15 - View
Trifolium pratense TPR.G17349 Tp57577_TGAC_v2_LG5 - View
Tripterygium wilfordii TWI14G0171 NC_052249.1 + View
Utricularia gibba unitig_748.g7125 unitig_748 + View
Vaccinium macrocarpon vmacro13535 Similar to DRP1E: Dynamin-related protein 1E (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro21090 Similar to DRP1E: Dynamin-related protein 1E (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0331G1587 CM024078.1 - View
Vitis vinifera GSVIVG01018380001 chr15 - View
Zea mays Zm00001eb024130 Zm00001e002399 Dynamin-related protein 1E 1 - View