Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold85G26763 scaffold85 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr8.2199 chr8 + View
Actinidia chinensis Actinidia29129 Lachesis_group3 - View
Actinidia chinensis Actinidia13778 Lachesis_group21 - View
Arabidopsis lyrata AL6G11020 scaffold_6 - View
Avicennia marina MSTRG.5598 ScioBoG_102839_HRSCAF_103093 - View
Avicennia marina MSTRG.26798 ScioBoG_52287_HRSCAF_52434 + View
Avicennia marina MSTRG.10231 ScioBoG_13798_HRSCAF_13862 - View
Arabidopsis thaliana AT2G38070 LOW protein: UPF0503-like protein, putative (DUF740) Protein of unknown function (DUF740)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF740) (TAIR:AT3G09070.1)%3B Has 108 Blast hits to 106 proteins in 27 species: Archae - 0%3B Bacteria - 3%3B Metazoa - 6%3B Fungi - 2%3B Plants - 76%3B Viruses - 0%3B Other Eukaryotes - 21 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT5G01170 hypothetical protein (DUF740) Protein of unknown function (DUF740)%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 (InterPro:IPR008004)%3B BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF740) (TAIR:AT3G09070.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC01g04212 ChrC01 - View
Brassica carinata BcaB06g28318 ChrB06 + View
Brassica napus C03p43810 C03 + View
Brassica napus A10p33630 A10 + View
Brassica napus C09p74550 C09 + View
Brassica napus A04p29180 A04 + View
Brassica napus C04p66390 C04 + View
Brassica oleracea BolC4t28144H C4 + View
Brassica oleracea BolC9t60187H C9 + View
Brassica rapa BraA04t18387Z A04 + View
Brassica rapa BraA10t45394Z A10 + View
Beta vulgaris EL10Ac7g16119 PTHR31659:SF0 - EMB|CAB61945.1 Chr7_EL10_PGA_scaffold5 + View
Camellia sinensis var. sinensis CSS0004795 PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Nelumbo nucifera] Chr10 + View
Camellia sinensis var. sinensis CSS0035257 PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Sesamum indicum] Chr4 + View
Capsicum annuum CAN.G394.102 PGAv.1.6.scaffold394 + View
Corylus avellana Haze_20951 Similar to OPS: Protein OCTOPUS (Arabidopsis thaliana OX%3D3702) 10 + View
Corylus avellana Haze_24247 Similar to OPS: Protein OCTOPUS (Arabidopsis thaliana OX%3D3702) 6 + View
Coffea canephora Cc01_g13800 Putative Protein of unknown function (DUF740) chr1 + View
Coffea canephora Cc06_g01660 Putative UPF0503 protein At3g09070, chloroplastic chr6 - View
Citrus clementina Ciclev10011239m.g scaffold_6 + View
Ceratophyllum demersum CDE04G1343 2 - View
Ceratophyllum demersum CDE03G0073 12 + View
Ceratophyllum demersum CDE04G2660 2 + View
Ceratophyllum demersum CDE09G0063 7 - View
Carpinus fangiana Cfa017255 Cfa07 - View
Cardamine hirsuta CARHR132650 Protein of unknown function (DUF740) Chr4 + View
Cardamine hirsuta CARHR083430 Protein of unknown function (DUF740) Chr3 - View
Cardamine hirsuta CARHR211490 Protein of unknown function (DUF740) Chr6 + View
Carya illinoinensis CiPaw.14G062200 PTHR31659//PTHR31659:SF0 - FAMILY NOT NAMED // EMB|CAB61945.1 Chr14 - View
Carya illinoinensis CiPaw.13G082000 PTHR31659:SF0 - EMB|CAB61945.1 Chr13 - View
Carya illinoinensis CiPaw.09G206200 PF05340 - Protein of unknown function (DUF740) (DUF740) Chr09 + View
Citrullus lanatus ClCG02G019720 Glycine-rich family protein CG_Chr02 - View
Citrullus lanatus ClCG04G007240 Glycine-rich family protein CG_Chr04 - View
Citrullus lanatus ClCG10G021840 Glycine-rich family protein CG_Chr10 + View
Cucumis melo MELO3C009191.2 UPF0503 protein At3g09070, chloroplastic chr04 + View
Cucumis melo MELO3C003225.2 UPF0503 protein At3g09070, chloroplastic chr08 + View
Cucumis melo MELO3C025873.2 UPF0503 protein At3g09070, chloroplastic chr11 + View
Chenopodium quinoa AUR62001692 Protein of unknown function C_Quinoa_Scaffold_2716 - View
Chenopodium quinoa AUR62020090 At3g09070: UPF0503 protein At3g09070, chloroplastic C_Quinoa_Scaffold_2465 + View
Capsella rubella Carub.0004s2004 PF05340 - Protein of unknown function (DUF740) (DUF740) scaffold_4 + View
Capsella rubella Carub.0006s0072 PF05340 - Protein of unknown function (DUF740) (DUF740) scaffold_6 - View
Cucumis sativus L. CsaV3_6G016420 UPF0503 protein At3g09070, chloroplastic chr6 - View
Cucumis sativus L. CsaV3_3G034150 UPF0503 protein At3g09070, chloroplastic chr3 - View
Cucumis sativus L. CsaV3_4G026000 UPF0503 protein At3g09070, chloroplastic-like chr4 + View
Davidia involucrata Dinv35512 GWHABJS00000015 - View
Durio zibethinus Duzib106G0289 NW_019168492.1 + View
Durio zibethinus Duzib093G1558 NW_019167937.1 + View
Durio zibethinus Duzib128G0887 NW_019168481.1 + View
Durio zibethinus Duzib150G1520 NW_019167882.1 - View
Erigeron canadensis ECA248G0582 Conyza_canadensis_scaffold:9 + View
Erigeron canadensis ECA247G1117 Conyza_canadensis_scaffold:7 + View
Eucalyptus grandis Eucgr.J01943 Chr10 - View
Eucalyptus grandis Eucgr.B02786 Chr01 - View
Erythranthe guttata Migut.L01994 scaffold_12 + View
Erythranthe guttata Migut.J00224 scaffold_10 - View
Eutrema salsugineum Thhalv10017664m.g PF05340 - Protein of unknown function (DUF740) (DUF740) scaffold_10 + View
Eutrema salsugineum Thhalv10015965m.g PF05340 - Protein of unknown function (DUF740) (DUF740) scaffold_2 - View
Fragaria x ananassa FAN09G4135 PF05340 - Protein of unknown function (DUF740) (DUF740) Fvb6-2 - View
Fragaria x ananassa FAN14G1423 PF05340 - Protein of unknown function (DUF740) (DUF740) Fvb6-1 - View
Fragaria vesca FvH4_6g12000 PF05340 - Protein of unknown function (DUF740) (DUF740) Fvb6 + View
Gossypium hirsutum Gohir.A01G225200 PF05340 - Protein of unknown function (DUF740) (DUF740) A01 - View
Gossypium hirsutum Gohir.A11G328700 PF05340 - Protein of unknown function (DUF740) (DUF740) A11 + View
Gossypium hirsutum Gohir.D04G128700 PF05340 - Protein of unknown function (DUF740) (DUF740) D04 + View
Gossypium hirsutum Gohir.D11G347700 PF05340 - Protein of unknown function (DUF740) (DUF740) D11 + View
Glycine max Glyma.01G111900 PF05340 - Protein of unknown function (DUF740) (DUF740) Gm01 + View
Glycine max Glyma.07G144900 PF05340 - Protein of unknown function (DUF740) (DUF740) Gm07 + View
Glycine max Glyma.18G196402 PF05340 - Protein of unknown function (DUF740) (DUF740) Gm18 + View
Glycine max Glyma.03G077200 PF05340 - Protein of unknown function (DUF740) (DUF740) Gm03 + View
Gossypium raimondii Gorai.009G094200 Chr09 + View
Gossypium raimondii Gorai.012G111800 Chr12 + View
Gossypium raimondii Gorai.007G378100 Chr07 + View
Helianthus annuus HanXRQChr13g0406211 Putative uncharacterised protein family UPF0503 HanXRQChr13 + View
Lupinus albus Lalb_Chr01g0022911 PF05340 - Protein of unknown function (DUF740) (DUF740) Lalb_Chr01 + View
Lotus japonicus Lj3g0020538 PF05340 - Protein of unknown function (DUF740) (DUF740) chr3 + View
Lonicera japonica Lj2C80T3 GWHAAZE00000002 + View
Lonicera japonica Lj3A956T51 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_9_36081 PF05340 - Protein of unknown function (DUF740) (DUF740) Lsat_1_v8_lg_9 - View
Malus domestica MD04G1147100 Protein of unknown function (DUF740) Chr04 - View
Malus domestica MD12G1160400 Protein of unknown function (DUF740) Chr12 - View
Malus domestica MD03G1077100 Protein of unknown function (DUF740) Chr03 - View
Manihot esculenta Manes.08G087800 Chromosome08 + View
Manihot esculenta Manes.09G102200 Chromosome09 + View
Manihot esculenta Manes.01G165100 Chromosome01 - View
Nicotiana tabacum Nitab4.5_0000008g0730 Uncharacterised protein family UPF0503 Nitab4.5_0000008 + View
Olea europaea Oeu044361.1 chr11 + View
Olea europaea Oeu015015.2 chr17 + View
Oryza sativa ssp. japonica Os05g0450600 Uncharacterised protein family UPF0503 domain containing protein. chr05 + View
Oryza sativa ssp. japonica Os01g0852400 Protein of unknown function DUF740 family protein. chr01 - View
Petunia axillaris Peaxi162Scf00009g00195 Protein of unknown function (DUF740) Peaxi162Scf00009 - View
Petunia axillaris Peaxi162Scf00141g00081 Protein of unknown function (DUF740) Peaxi162Scf00141 - View
Punica granatum PGR031G0169 NC_045127.1 + View
Punica granatum PGR119G0454 NC_045132.1 + View
Prunus persica Prupe.6G270900 PF05340 - Protein of unknown function (DUF740) (DUF740) Pp06 - View
Prunus persica Prupe.6G061700 PTHR31659:SF0 - EMB Pp06 - View
Populus trichocarpa Potri.001G248400 PTHR31659:SF0 - EMB|CAB61945.1 Chr01 + View
Populus trichocarpa Potri.006G096600 PF05340 - Protein of unknown function (DUF740) (DUF740) Chr06 + View
Populus trichocarpa Potri.016G111400 PF05340 - Protein of unknown function (DUF740) (DUF740) Chr16 + View
Phaseolus vulgaris Phvul.008G107800 PF05340 - Protein of unknown function (DUF740) (DUF740) Chr08 - View
Rhododendron simsii Rhsim13G0073200 chr13 - View
Salvia bowleyana SalBow5G3786 GWHASIU00000003 + View
Salix brachista Sabra16G0107700 GWHAAZH00000016 + View
Salix brachista Sabra06G0074200 GWHAAZH00000006 + View
Simmondsia chinensis Sc07g0006840 GWHAASQ00000007 - View
Sechium edule Sed0017639 LG14 - View
Sapria himalayana SHI12785 scaffold11_13529635 + View
Solanum lycopersicum Solyc09g014160.3 UPF0503 protein At3g09070, chloroplastic-like (AHRD V3.3 *** A0A2I4FKI6_9ROSI) SL4.0ch09 + View
Solanum lycopersicum Solyc10g085070.3 UPF0503 protein, chloroplastic (AHRD V3.3 *** A0A1J3F8G8_NOCCA) SL4.0ch10 + View
Solanum lycopersicum Solyc06g076700.1 UPF0503 protein, chloroplastic (AHRD V3.3 *** A0A1J3D8K5_NOCCA) SL4.0ch06 + View
Schrenkiella parvula Sp6g40530 PF05340 - Protein of unknown function (DUF740) (DUF740) ch6-6 + View
Schrenkiella parvula Sp4g20390 PF05340 - Protein of unknown function (DUF740) (DUF740) ch4-6 + View
Solanum pennellii Sopen10g034530 Uncharacterised protein family UPF0503, Protein of unknown function (DUF740) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 | BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF740) Spenn-ch10 + View
Solanum pennellii Sopen09g007030 Uncharacterised protein family UPF0503, Protein of unknown function (DUF740) | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF740 | BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF740) Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400020347 Conserved gene of unknown function ST4.03ch09 - View
Trochodendron aralioides TAR369G0244 group18 - View
Tarenaya hassleriana THA.LOC104824521 UPF0503 protein At3g09070%2C chloroplastic NW_010966881.1 - View
Tarenaya hassleriana THA.LOC104810732 UPF0503 protein At3g09070%2C chloroplastic NW_010965304.1 - View
Tripterygium wilfordii TWI75G0667 NC_052253.1 - View
Tripterygium wilfordii TWI79G0350 NC_052238.1 - View
Tripterygium wilfordii TWI77G0066 NC_052236.1 + View
Tripterygium wilfordii TWI74G0768 NC_052234.1 - View
Tripterygium wilfordii TWI53G0423 NC_052244.1 + View
Vanilla planifolia HPP92_018190 Upf0503 protein, chloroplastic *-* CM028158.1 - View
Vitis vinifera GSVIVG01034008001 chr8 + View
Vitis vinifera GSVIVG01024799001 chr6 + View
Zea mays Zm00001eb367430 Zm00001e028737 UPF0503 protein chloroplastic 8 + View
Zea mays Zm00001eb147740 Zm00001e019256 UPF0503 protein chloroplastic 3 + View