Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold126G33825 scaffold126 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G7480 LG-5 - View
Aethionema arabicum Aa31LG1G22240 LG-1 + View
Aethionema arabicum Aa31LG5G22910 LG-5 + View
Acer truncatum Atru.chr8.1931 chr8 + View
Acer truncatum Atru.chr3.3829 chr3 + View
Actinidia chinensis Actinidia05295 Lachesis_group20 + View
Arabidopsis lyrata AL3G20660 scaffold_3 - View
Arabidopsis lyrata AL8G36480 scaffold_8 + View
Arabidopsis lyrata AL6G11840 scaffold_6 - View
Arabidopsis lyrata AL4G23250 scaffold_4 + View
Arabidopsis lyrata AL4G33930 scaffold_4 + View
Avicennia marina MSTRG.5687 ScioBoG_102839_HRSCAF_103093 + View
Amaranthus hybridus Ah.08g219050 AmaHy_arrow1_Scaffold_8 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.2MB6KR K11252 - histone H2B (H2B) arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT5G02570 Histone superfamily protein Histone superfamily protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleolus%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%2C 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT2G37470.1)%3B Has 3216 Blast hits to 3216 proteins in 325 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2228%3B Fungi - 200%3B Plants - 462%3B Viruses - 0%3B Other Eukaryotes - 326 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT2G37470 Histone superfamily protein Histone superfamily protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleus%2C nucleosome%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G53650.1)%3B Has 3293 Blast hits to 3281 proteins in 346 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2242%3B Fungi - 218%3B Plants - 466%3B Viruses - 0%3B Other Eukaryotes - 367 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT2G28720 Histone superfamily protein Histone superfamily protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleus%2C nucleosome%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT3G45980.1)%3B Has 3535 Blast hits to 3431 proteins in 349 species: Archae - 0%3B Bacteria - 57%3B Metazoa - 2253%3B Fungi - 226%3B Plants - 491%3B Viruses - 2%3B Other Eukaryotes - 506 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT3G09480 Histone superfamily protein Histone superfamily protein%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: nucleosome assembly%3B LOCATED IN: nucleus%2C nucleosome%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Histone H2B (InterPro:IPR000558)%2C Histone-fold (InterPro:IPR009072)%2C Histone core (InterPro:IPR007125)%3B BEST Arabidopsis thaliana protein match is: Histone superfamily protein (TAIR:AT5G02570.1)%3B Has 3226 Blast hits to 3226 proteins in 338 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2242%3B Fungi - 198%3B Plants - 460%3B Viruses - 0%3B Other Eukaryotes - 326 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaB02g10198 ChrB02 + View
Brassica carinata BcaB06g28245 ChrB06 + View
Brassica napus C04p57900 C04 + View
Brassica napus A07p21770 A07 + View
Brassica napus C02p12010 C02 - View
Brassica oleracea BolC4t27315H C4 + View
Brassica oleracea BolC6t37348H C6 + View
Brassica rapa BraA04t17745Z A04 + View
Brassica rapa BraA07t29859Z A07 + View
Cicer arietinum L. Ca_08788_v3 Ca_LG3_v3 - View
Cicer arietinum L. Ca_19186_v3 Ca_LG6_v3 - View
Coffea canephora Cc06_g02990 Probable histone H2B.1 chr6 + View
Coffea canephora Cc01_g12380 Probable histone H2B.1 chr1 + View
Citrus clementina Ciclev10013909m.g scaffold_6 + View
Citrus clementina Ciclev10029263m.g scaffold_8 + View
Cardamine hirsuta CARHR210790 Histone H2B Chr6 + View
Cardamine hirsuta CARHR121850 Histone H2B Chr4 + View
Cardamine hirsuta CARHR273520 Histone H2B Chr8 + View
Carya illinoinensis CiPaw.13G098000 KOG1744 - Histone H2B Chr13 - View
Carya illinoinensis CiPaw.10G143000 K11252 - histone H2B (H2B) Chr10 + View
Carya illinoinensis CiPaw.14G071100 K11252 - histone H2B (H2B) Chr14 - View
Citrullus lanatus ClCG10G020920 Histone H2B CG_Chr10 + View
Citrullus lanatus ClCG02G020380 Histone H2B CG_Chr02 - View
Cucumis melo MELO3C009279.2 Histone H2B chr04 + View
Cucumis melo MELO3C013684.2 histone H2B chr11 + View
Cucumis sativus L. CsaV3_3G035090 Histone H2B chr3 - View
Daucus carota DCAR_005989 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv35638 GWHABJS00000015 - View
Durio zibethinus Duzib170G0929 NW_019167871.1 - View
Durio zibethinus Duzib168G2205 NW_019168159.1 - View
Durio zibethinus Duzib150G0640 NW_019167882.1 + View
Durio zibethinus Duzib128G0636 NW_019168481.1 + View
Durio zibethinus Duzib093G2084 NW_019167937.1 + View
Eucalyptus grandis Eucgr.J02067 Chr10 - View
Eutrema salsugineum Thhalv10014927m.g K11252 - histone H2B (H2B) scaffold_2 - View
Eutrema salsugineum Thhalv10017370m.g K11252 - histone H2B (H2B) scaffold_10 + View
Eutrema salsugineum Thhalv10017408m.g K11252 - histone H2B (H2B) scaffold_10 + View
Fragaria x ananassa FAN02G4254 K11252 - histone H2B (H2B) Fvb6-4 - View
Fragaria x ananassa FAN09G3408 K11252 - histone H2B (H2B) Fvb6-2 + View
Fragaria x ananassa FAN05G0530 K11252 - histone H2B (H2B) Fvb6-3 + View
Fragaria x ananassa FAN14G1419 K11252 - histone H2B (H2B) Fvb6-1 + View
Fragaria vesca FvH4_6g14330 K11252 - histone H2B (H2B) Fvb6 - View
Gossypium hirsutum Gohir.A04G080000 K11252 - histone H2B (H2B) A04 + View
Gossypium hirsutum Gohir.D04G119300 K11252 - histone H2B (H2B) D04 + View
Gossypium hirsutum Gohir.A01G219600 K11252 - histone H2B (H2B) A01 + View
Gossypium hirsutum Gohir.D01G208700 K11252 - histone H2B (H2B) D01 + View
Glycine max Glyma.19G173400 K11252 - histone H2B (H2B) Gm19 - View
Glycine max Glyma.12G065100 K11252 - histone H2B (H2B) Gm12 - View
Glycine max Glyma.03G172500 K11252 - histone H2B (H2B) Gm03 - View
Glycine max Glyma.13G132100 K11252 - histone H2B (H2B) Gm13 - View
Gossypium raimondii Gorai.002G253900 Chr02 + View
Gossypium raimondii Gorai.009G424400 Chr09 + View
Lupinus albus Lalb_Chr03g0026791 K11252 - histone H2B (H2B) Lalb_Chr03 - View
Lupinus albus Lalb_Chr14g0375021 K11252 - histone H2B (H2B) Lalb_Chr14 + View
Lupinus albus Lalb_Chr01g0003781 K11252 - histone H2B (H2B) Lalb_Chr01 - View
Lupinus albus Lalb_Chr19g0137711 K11252 - histone H2B (H2B) Lalb_Chr19 - View
Lotus japonicus Lj5g0001274 K11252 - histone H2B (H2B) chr5 + View
Lotus japonicus Lj1g0012441 K11252 - histone H2B (H2B) chr1 + View
Lotus japonicus Lj3g0019527 K11252 - histone H2B (H2B) chr3 - View
Lonicera japonica Lj2P1056T29 GWHAAZE00000002 - View
Lonicera japonica Lj1P157T37 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_1_55740 K11252 - histone H2B (H2B) Lsat_1_v8_lg_1 - View
Malus domestica MD04G1120800 Histone superfamily protein Chr04 + View
Malus domestica MD11G1112800 Histone superfamily protein Chr11 - View
Malus domestica MD12G1138100 Histone superfamily protein Chr12 + View
Manihot esculenta Manes.08G076860 Chromosome08 - View
Manihot esculenta Manes.04G031500 Chromosome04 + View
Medicago truncatula Medtr4g063200 core histone H2A/H2B/H3/H4 chr4 + View
Medicago truncatula Medtr1g068600 histone H2A 6 chr1 + View
Medicago truncatula Medtr7g099960 core histone H2A/H2B/H3/H4 chr7 - View
Nelumbo nucifera Nn2g12893 chr2 - View
Oryza sativa ssp. japonica Os05g0460475 Similar to Histone H2B.11. chr05 + View
Oryza sativa ssp. japonica Os01g0839500 Histone-fold domain containing protein. chr01 - View
Oryza sativa ssp. japonica Os03g0279000 Similar to Histone H2B.1. chr03 + View
Punica granatum PGR004G0166 NC_045131.1 + View
Punica granatum PGR102G2144 NC_045129.1 + View
Prunus persica Prupe.6G250100 K11252 - histone H2B (H2B) Pp06 + View
Pisum sativum Psat6g067800 Histone H2B signature chr6LG2 - View
Phaseolus vulgaris Phvul.007G158200 K11252 - histone H2B (H2B) Chr07 - View
Phaseolus vulgaris Phvul.011G066100 K11252 - histone H2B (H2B) Chr11 - View
Quercus lobata QL07p047169 7 + View
Rosa chinensis RcHm_v2.0_Chr3g0467331 RcHm_v2.0_Chr3 - View
Rhododendron simsii Rhsim01G0224900 chr01 + View
Rhododendron simsii Rhsim13G0085200 chr13 + View
Simmondsia chinensis Sc12g0001640 GWHAASQ00000012 + View
Sechium edule Sed0013490 LG05 + View
Sechium edule Sed0010120 LG04 - View
Schrenkiella parvula Sp6g21620 K11252 - histone H2B (H2B) ch6-6 + View
Schrenkiella parvula Sp4g11580 K11252 - histone H2B (H2B) ch4-6 + View
Schrenkiella parvula Sp3g07850 K11252 - histone H2B (H2B) ch3-1 - View
Solanum tuberosum PGSC0003DMG400029167 Histone H2B.11 ST4.03ch06 - View
Selenicereus undatus Hund18935 Scaffold_33675 - View
Trochodendron aralioides TAR633G2668 group2 - View
Theobroma cacao Thecc.05G044700 Histone superfamily protein Chromosome_5 - View
Tarenaya hassleriana THA.LOC104823425 probable histone H2B.3 NW_010966881.1 - View
Tarenaya hassleriana THA.LOC104826343 histone H2B.11-like NW_010967707.1 + View
Tarenaya hassleriana THA.LOC104800646 histone H2B NW_010969548.1 + View
Trifolium pratense TPR.G37816 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI79G0399 NC_052238.1 - View
Vaccinium macrocarpon vmacro03095 Similar to HIS2B: Histone H2B (Gossypium hirsutum OX%3D3635) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1127G1951 CM024076.1 - View
Vanilla planifolia HPP92_014315 Histone H2B *** CM028155.1 - View
Vitis vinifera GSVIVG01025025001 chr6 + View
Zea mays Zm00001eb368020 Zm00001e028779 Histone H2B 8 + View
Zea mays Zm00001eb397510 Zm00001e038466 Histone H2B 9 - View
Zea mays Zm00001eb148540 Zm00001e019346 Histone H2B histone 2B4 3 + View