Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold40G15534 scaffold40 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G22280 LG-5 - View
Acer truncatum Atru.chr8.1841 chr8 + View
Avicennia marina MSTRG.19166 ScioBoG_25048_HRSCAF_25167 - View
Avicennia marina MSTRG.26699 ScioBoG_52287_HRSCAF_52434 + View
Aquilegia oxysepala Aqoxy1G01186 CHR01 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ILX5DK PTHR21717//PTHR21717:SF21 - TELOMERIC REPEAT BINDING PROTEIN // PROTEIN TRF-LIKE 8 arahy.Tifrunner.gnm1.Arahy.02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.S5L34I PTHR21717//PTHR21717:SF21 - TELOMERIC REPEAT BINDING PROTEIN // PROTEIN TRF-LIKE 8 arahy.Tifrunner.gnm1.Arahy.12 + View
Arabidopsis thaliana AT2G37025 TRF-like 8 TRF-like 8 (TRFL8)%3B FUNCTIONS IN: DNA binding%3B INVOLVED IN: regulation of transcription%3B CONTAINS InterPro DOMAIN/s: SANT%2C DNA-binding (InterPro:IPR001005)%2C Homeodomain-like (InterPro:IPR009057)%2C HTH transcriptional regulator%2C Myb-type%2C DNA-binding (InterPro:IPR017930)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: TRF-like 6 (TAIR:AT1G72650.2)%3B Has 426 Blast hits to 414 proteins in 80 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 30%3B Fungi - 25%3B Plants - 327%3B Viruses - 0%3B Other Eukaryotes - 44 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB01g03800 ChrB01 - View
Brassica carinata BcaC01g05626 ChrC01 + View
Brassica napus A03p20390 A03 + View
Brassica napus C03p23980 C03 + View
Brassica oleracea BolC3t14789H C3 + View
Brassica rapa BraA03t11283Z A03 + View
Cannabis sativa CANSAT80G0518 NC_044372.1 - View
Cicer arietinum L. Ca_11487_v3 Ca_LG4_v3 - View
Coffea canephora Cc06_g04060 Putative uncharacterized protein chr6 - View
Citrus clementina Ciclev10011603m.g scaffold_6 + View
Cardamine hirsuta CARHR131510 Telomere repeat-binding protein 6 Chr4 + View
Carya illinoinensis CiPaw.10G132600 PTHR21717//PTHR21717:SF21 - TELOMERIC REPEAT BINDING PROTEIN // PROTEIN TRF-LIKE 8 Chr10 + View
Carya illinoinensis CiPaw.09G174000 PTHR21717//PTHR21717:SF21 - TELOMERIC REPEAT BINDING PROTEIN // PROTEIN TRF-LIKE 8 Chr09 + View
Citrullus lanatus ClCG04G009190 Telomere repeat-binding protein 4 CG_Chr04 - View
Cucumis melo MELO3C014217.2 Telomere repeat-binding protein 4 chr08 + View
Carica papaya Cpa.g.sc92.112 supercontig_92 + View
Capsella rubella Carub.0004s1889 PTHR21717//PTHR21717:SF21 - TELOMERIC REPEAT BINDING PROTEIN // PROTEIN TRF-LIKE 8 scaffold_4 + View
Cucumis sativus L. CsaV3_6G039760 Telomere repeat-binding protein 4 chr6 - View
Daucus carota DCAR_014990 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv37300 GWHABJS00000021 + View
Durio zibethinus Duzib128G0606 NW_019168481.1 + View
Durio zibethinus Duzib106G1082 NW_019168492.1 + View
Durio zibethinus Duzib093G1485 NW_019167937.1 + View
Erythranthe guttata Migut.L01689 scaffold_12 - View
Erythranthe guttata Migut.J00525 scaffold_10 + View
Eutrema salsugineum Thhalv10016738m.g PTHR21717:SF21 - PROTEIN TRF-LIKE 8 scaffold_10 + View
Fragaria x ananassa FAN02G0658 PTHR21717//PTHR21717:SF29 - TELOMERIC REPEAT BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb6-4 - View
Fragaria x ananassa FAN05G3447 PTHR21717:SF21 - PROTEIN TRF-LIKE 8 Fvb6-3 + View
Fragaria vesca FvH4_6g16130 PTHR21717//PTHR21717:SF29 - TELOMERIC REPEAT BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb6 - View
Gossypium hirsutum Gohir.A11G324300 PTHR21717//PTHR21717:SF21 - TELOMERIC REPEAT BINDING PROTEIN // PROTEIN TRF-LIKE 8 A11 + View
Gossypium hirsutum Gohir.A01G214600 PTHR21717//PTHR21717:SF21 - TELOMERIC REPEAT BINDING PROTEIN // PROTEIN TRF-LIKE 8 A01 + View
Gossypium hirsutum Gohir.D01G203100 PTHR21717//PTHR21717:SF21 - TELOMERIC REPEAT BINDING PROTEIN // PROTEIN TRF-LIKE 8 D01 + View
Gossypium hirsutum Gohir.D11G343400 PTHR21717//PTHR21717:SF21 - TELOMERIC REPEAT BINDING PROTEIN // PROTEIN TRF-LIKE 8 D11 + View
Gossypium raimondii Gorai.007G373500 Chr07 + View
Gossypium raimondii Gorai.002G247800 Chr02 + View
Helianthus annuus HanXRQChr11g0350271 Putative homeodomain-like HanXRQChr11 - View
Helianthus annuus HanXRQChr01g0027511 Putative homeodomain-like HanXRQChr01 - View
Lupinus albus Lalb_Chr21g0314941 PTHR21717:SF21 - PROTEIN TRF-LIKE 8 Lalb_Chr21 - View
Lotus japonicus Lj5g0008179 PTHR21717:SF21 - PROTEIN TRF-LIKE 8 chr5 + View
Lonicera japonica Lj3A983T64 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_6_45261 Lsat_1_v8_lg_6 + View
Lactuca sativa Lsat_1_v5_gn_1_53040 PTHR21717//PTHR21717:SF29 - TELOMERIC REPEAT BINDING PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_1 + View
Malus domestica MD04G1095600 Chr04 + View
Malus domestica MD12G1115600 TRF-like 8 Chr12 + View
Manihot esculenta Manes.08G008900 Chromosome08 - View
Manihot esculenta Manes.09G064100 Chromosome09 + View
Medicago truncatula Medtr1g063940 myb transcription factor chr1 + View
Nicotiana tabacum Nitab4.5_0000101g0340 SANT/Myb domain, Homeodomain-like, Myb domain Nitab4.5_0000101 - View
Olea europaea Oeu016974.2 chr2 + View
Petunia axillaris Peaxi162Scf00123g01118 Unknown protein Peaxi162Scf00123 - View
Punica granatum PGR142G3844 NC_045128.1 - View
Punica granatum PGR119G2274 NC_045132.1 + View
Prunus persica Prupe.6G234700 Pp06 + View
Populus trichocarpa Potri.006G126300 PTHR21717//PTHR21717:SF21 - TELOMERIC REPEAT BINDING PROTEIN // PROTEIN TRF-LIKE 8 Chr06 + View
Quercus lobata QL07p044034 7 + View
Rosa chinensis RcHm_v2.0_Chr3g0469971 RcHm_v2.0_Chr3 - View
Salvia bowleyana SalBow5G4639 GWHASIU00000003 + View
Salvia bowleyana SalBow5G4755 GWHASIU00000003 + View
Salix brachista Sabra06G0099600 GWHAAZH00000006 + View
Salix brachista Sabra16G0096800 GWHAAZH00000016 - View
Sechium edule Sed0020845 LG14 + View
Solanum lycopersicum Solyc11g069850.3 Telomere repeat-binding protein 6 (AHRD V3.3 *-* A0A2I0VYX5_9ASPA) SL4.0ch11 + View
Solanum lycopersicum Solyc09g007990.3 Telomere repeat-binding protein 4 (AHRD V3.3 *-* A0A2I0WPS0_9ASPA) SL4.0ch09 - View
Schrenkiella parvula Sp4g19310 PTHR21717//PTHR21717:SF21 - TELOMERIC REPEAT BINDING PROTEIN // PROTEIN TRF-LIKE 8 ch4-6 + View
Solanum pennellii Sopen11g028430 TRF-like 8 (TRFL8) | FUNCTIONS IN: DNA binding | INVOLVED IN: regulation of transcription | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , Homeodomain-like , HTH transcriptional regulator, Myb-type, DNA-binding , Homeodomain-related | BEST Arabidopsis thaliana protein match is: TRF-like 6 Spenn-ch11 - View
Solanum pennellii Sopen09g002790 TRF-like 8 (TRFL8) | FUNCTIONS IN: DNA binding | INVOLVED IN: regulation of transcription | CONTAINS InterPro DOMAIN/s: SANT, DNA-binding , Homeodomain-like , HTH transcriptional regulator, Myb-type, DNA-binding , Homeodomain-related | BEST Arabidopsis thaliana protein match is: TRF-like 6 Spenn-ch09 - View
Solanum tuberosum PGSC0003DMG400008048 Conserved gene of unknown function ST4.03ch11 - View
Trochodendron aralioides TAR623G1051 group7 + View
Theobroma cacao Thecc.05G063300 TRF-like 8 Chromosome_5 - View
Tripterygium wilfordii TWI79G0498 NC_052238.1 - View
Tripterygium wilfordii TWI74G0209 NC_052234.1 + View
Tripterygium wilfordii TWI53G2014 NC_052244.1 - View
Vigna mungo VMungo0720G0621 CM024071.1 - View
Vitis vinifera GSVIVG01025710001 chr8 + View