Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold34G13734 scaffold34 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr2.2711 chr2 + View
Actinidia chinensis Actinidia35254 Lachesis_group2 + View
Actinidia chinensis Actinidia01887 Lachesis_group0 - View
Actinidia chinensis Actinidia18762 Lachesis_group9 + View
Actinidia chinensis Actinidia05623 Lachesis_group20 - View
Arabidopsis lyrata AL3G27880 scaffold_3 + View
Avicennia marina MSTRG.6840 ScioBoG_102840_HRSCAF_103099 + View
Avicennia marina MSTRG.15221 ScioBoG_19538_HRSCAF_19626 - View
Amaranthus hybridus Ah.06g183980 AmaHy_arrow1_Scaffold_6 - View
Amaranthus hybridus Ah.04g165130 Choline transporter protein 1 (AtCTL1) (Protein SIGNIFICANT IONOME CHANGES 1) AmaHy_arrow1_Scaffold_4 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YA7R1N K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YHI9TY K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) arahy.Tifrunner.gnm1.Arahy.18 - View
Arabidopsis thaliana AT3G15380 Plasma-membrane choline transporter family protein Encodes a member of a choline transporter-like protein family that facilitates choline transport%2C localizes to the trans-Golgi network%2C and during cytokinesis is associated with the phragmoplast. Loss-of-function results in an altered choline metabolite profile%2C defects in sieve plate and sieve pore formation and impaired phloem transport. Plasma-membrane choline transporter family protein%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 (InterPro:IPR007603)%3B Has 948 Blast hits to 937 proteins in 182 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 503%3B Fungi - 120%3B Plants - 118%3B Viruses - 0%3B Other Eukaryotes - 207 (source: NCBI BLink). Chr3 + View
Amborella trichopoda ATR0680G284 AmTr_v1.0_scaffold00009 + View
Brassica carinata BcaC09g48503 ChrC09 + View
Brassica carinata BcaC01g03876 ChrC01 - View
Brassica carinata BcaB06g29569 ChrB06 + View
Brassica carinata BcaB04g20929 ChrB04 - View
Brassica napus A01p38720 A01 + View
Brassica napus C05p51790 C05 - View
Brassica napus C01p49070 C01 - View
Brassica napus A05p34020 A05 - View
Brassica napus A03p39290 A03 + View
Brassica oleracea BolC1t04870H C1 - View
Brassica oleracea BolC5t33865H C5 - View
Brassica oleracea BolC3t17043H C3 + View
Brassica rapa BraA05t22224Z A05 - View
Brassica rapa BraA01t03913Z A01 - View
Beta vulgaris EL10Ac4g08143 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) Chr4_EL10_PGA_scaffold1 - View
Camellia sinensis var. sinensis CSS0023849 PREDICTED: choline transporter-like protein 2 [Nicotiana tomentosiformis] Chr7 - View
Camellia sinensis var. sinensis CSS0014763 PREDICTED: choline transporter-like protein 2 [Nicotiana tomentosiformis] Chr5 + View
Camellia sinensis var. sinensis CSS0019237 Plasma-membrane choline transporter family protein isoform 1 [Theobroma cacao] Chr8 - View
Capsicum annuum CAN.G162.68 PGAv.1.6.scaffold162 + View
Cannabis sativa CANSAT56G0567 NC_044371.1 + View
Cicer arietinum L. Ca_01833_v3 Ca_LG1_v3 - View
Corylus avellana Haze_09456 Similar to CHER1: Choline transporter protein 1 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc05_g12200 Putative CTL-like protein 1 chr5 + View
Citrus clementina Ciclev10007637m.g scaffold_1 + View
Carpinus fangiana Cfa020557 Cfa08 - View
Cardamine hirsuta CARHR090420 Choline transporter like family Chr3 + View
Carya illinoinensis CiPaw.11G172300 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) Chr11 + View
Citrullus lanatus ClCG11G018140 Choline transporter-related family protein CG_Chr11 + View
Cucumis melo MELO3C016707.2 Choline transporter-like protein 2 chr07 - View
Corchorus olitorius COL.COLO4_09421 Choline transporter-like protein AWUE01014232.1 + View
Carica papaya Cpa.g.sc80.47 supercontig_80 + View
Chenopodium quinoa AUR62029372 slc44a5a: Choline transporter-like protein 5-A C_Quinoa_Scaffold_2939 - View
Chenopodium quinoa AUR62034265 slc44a5a: Choline transporter-like protein 5-A C_Quinoa_Scaffold_1337 + View
Cucumis sativus L. CsaV3_4G033780 choline transporter-like protein 2 chr4 + View
Daucus carota DCAR_004079 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_019547 hypothetical protein DCARv2_Chr5 - View
Daucus carota DCAR_008042 hypothetical protein DCARv2_Chr2 + View
Davidia involucrata Dinv08306 GWHABJS00000013 - View
Davidia involucrata Dinv04314 GWHABJS00000001 + View
Davidia involucrata Dinv07551 GWHABJS00000020 + View
Durio zibethinus Duzib213G0462 NW_019167993.1 - View
Erigeron canadensis ECA236G4993 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.F01103 Chr06 - View
Erythranthe guttata Migut.M00849 scaffold_13 + View
Fragaria x ananassa FAN16G2459 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) Fvb3-3 + View
Fragaria x ananassa FAN25G0303 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) Fvb3-1 - View
Fragaria x ananassa FAN11G2849 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) Fvb3-4 - View
Fragaria x ananassa FAN21G0641 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) Fvb3-2 - View
Fragaria vesca FvH4_3g20420 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) Fvb3 + View
Gossypium hirsutum Gohir.D01G052400 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) D01 + View
Gossypium hirsutum Gohir.A01G065000 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) A01 + View
Glycine max Glyma.12G223200 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) Gm12 - View
Glycine max Glyma.06G246600 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) Gm06 + View
Glycine max Glyma.13G278300 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) Gm13 + View
Glycine max Glyma.12G150800 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) Gm12 - View
Gossypium raimondii Gorai.002G072200 Chr02 + View
Helianthus annuus HanXRQChr11g0328451 Putative choline transporter-like HanXRQChr11 + View
Hydrangea macrophylla Hma1.2p1_0148F.1_g066130 Hma1.2p1_0148F.1 + View
Lupinus albus Lalb_Chr19g0134281 PTHR12385//PTHR12385:SF47 - CTL TRANSPORTER // SUBFAMILY NOT NAMED Lalb_Chr19 + View
Lupinus albus Lalb_Chr25g0286471 PTHR12385//PTHR12385:SF47 - CTL TRANSPORTER // SUBFAMILY NOT NAMED Lalb_Chr25 + View
Lupinus albus Lalb_Chr01g0006491 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) Lalb_Chr01 - View
Lotus japonicus Lj3g0021569 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) chr3 - View
Lonicera japonica Lj8C157T5 GWHAAZE00000008 + View
Lonicera japonica Lj1A846T66 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_7_105200 Lsat_1_v8_lg_7 - View
Magnolia biondii MBI17_g30525_MAGBIO AED:0.05 Chr17 + View
Manihot esculenta Manes.15G086100 Chromosome15 + View
Manihot esculenta Manes.03G112000 Chromosome03 - View
Medicago truncatula Medtr2g079490 plasma-membrane choline transporter family protein chr2 + View
Nelumbo nucifera Nn1g06580 chr1 + View
Olea europaea Oeu005419.1 chr10 - View
Oryza sativa ssp. japonica Os04g0681400 Protein of unknown function DUF580 family protein. chr04 - View
Petunia axillaris Peaxi162Scf00069g01337 Choline transporter-like protein 2 Peaxi162Scf00069 - View
Punica granatum PGR083G2041 NC_045133.1 - View
Prunus persica Prupe.4G183900 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) Pp04 + View
Papaver somniferum PSO675G9024 NC_039358.1 - View
Papaver somniferum PSO541G1226 NC_039363.1 - View
Populus trichocarpa Potri.011G121100 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) Chr11 + View
Phaseolus vulgaris Phvul.005G082401 Chr05 + View
Phaseolus vulgaris Phvul.011G150000 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) Chr11 - View
Quercus lobata QL08p020494 8 - View
Rosa chinensis RcHm_v2.0_Chr5g0034311 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim04G0020100 chr04 - View
Rhododendron simsii Rhsim06G0197100 chr06 - View
Simmondsia chinensis Sc03g0009930 GWHAASQ00000003 + View
Sechium edule Sed0005873 LG04 + View
Solanum lycopersicum Solyc07g063230.3 Choline transporter-like protein (AHRD V3.3 *** A0A1R3ICN0_COCAP) SL4.0ch07 + View
Schrenkiella parvula Sp3g13630 K15377 - solute carrier family 44 (choline transporter-like protein), member 2/4/5 (SLC44A2_4_5) ch3-1 + View
Solanum pennellii Sopen07g031420 Plasma-membrane choline transporter family protein | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF580 Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG400012423 Conserved gene of unknown function ST4.03ch07 + View
Selenicereus undatus Hund02220 Scaffold_33678 + View
Selenicereus undatus Hund22933 Scaffold_33680 + View
Trochodendron aralioides TAR624G0482 group9 + View
Trochodendron aralioides TAR626G1858 group3 - View
Theobroma cacao Thecc.07G080500 Plasma-membrane choline transporter family protein Chromosome_7 - View
Tarenaya hassleriana THA.LOC104810480 choline transporter-like protein 2 NW_010965216.1 + View
Tarenaya hassleriana THA.LOC104818067 choline transporter-like protein 2 isoform X1 NW_010966021.1 - View
Tripterygium wilfordii TWI39G1274 NC_052250.1 - View
Vaccinium macrocarpon vmacro11852 Similar to CHER1: Choline transporter protein 1 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro09540 Similar to CHER1: Choline transporter protein 1 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1080G1275 CM024079.1 - View