Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold34G13761 scaffold34 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G2280 LG-8 - View
Acer truncatum Atru.chr2.2348 chr2 - View
Actinidia chinensis Actinidia18782 Lachesis_group9 - View
Actinidia chinensis Actinidia35231 Lachesis_group2 - View
Arabidopsis lyrata AL3G27420 scaffold_3 - View
Avicennia marina MSTRG.14943 ScioBoG_19538_HRSCAF_19626 + View
Avicennia marina MSTRG.12886 ScioBoG_17730_HRSCAF_17811 - View
Aquilegia oxysepala Aqoxy1G02241 CHR01 - View
Aquilegia oxysepala Aqoxy4G00555 CHR04 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.P1EDFW PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SVS9JH K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) arahy.Tifrunner.gnm1.Arahy.07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D7J394 K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) arahy.Tifrunner.gnm1.Arahy.18 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0VC4NW PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.13 + View
Arabidopsis thaliana AT3G15070 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G53190.2)%3B Has 7358 Blast hits to 7345 proteins in 274 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 2154%3B Fungi - 590%3B Plants - 3295%3B Viruses - 49%3B Other Eukaryotes - 1266 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaB06g29532 ChrB06 - View
Brassica carinata BcaC01g03894 ChrC01 + View
Brassica napus A05p34370 A05 + View
Brassica napus A03p39130 A03 - View
Brassica napus C05p52140 C05 + View
Brassica oleracea BolC5t33899H C5 + View
Brassica rapa BraA05t22258Z A05 + View
Brassica rapa BraA03t13062Z A03 - View
Beta vulgaris EL10Ac4g08284 K10635 - E3 ubiquitin-protein ligase Arkadia [EC:6.3.2.19] (RNF111) Chr4_EL10_PGA_scaffold1 + View
Camellia sinensis var. sinensis CSS0029997 unnamed protein product [Coffea canephora] Contig627 + View
Cannabis sativa CANSAT35G1306 NC_044378.1 - View
Cicer arietinum L. Ca_04027_v3 Ca_LG1_v3 - View
Corylus avellana Haze_09375 Similar to ZFP1: Probable E3 ubiquitin-protein ligase ZFP1 (Oryza sativa subsp. japonica OX%3D39947) 4 + View
Coffea canephora Cc05_g11530 Putative RING/U-box superfamily protein chr5 - View
Citrus clementina Ciclev10007976m.g scaffold_1 - View
Cardamine hirsuta CARHR090030 RING/U-box superfamily protein Chr3 - View
Carya illinoinensis CiPaw.12G115900 PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr12 - View
Carya illinoinensis CiPaw.11G165800 PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr11 - View
Citrullus lanatus ClCG11G017720 RING/U-box superfamily protein LENGTH=494 CG_Chr11 - View
Cucumis melo MELO3C016085.2 E3 ubiquitin-protein ligase Arkadia chr07 + View
Chenopodium quinoa AUR62019508 HIP1: Probable E3 ubiquitin-protein ligase HIP1 C_Quinoa_Scaffold_2127 + View
Chenopodium quinoa AUR62036129 MBR2: E3 ubiquitin-protein ligase MBR2 C_Quinoa_Scaffold_2702 - View
Capsella rubella Carub.0003s1471 PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED scaffold_3 - View
Cucumis sativus L. CsaV3_4G008450 E3 ubiquitin-protein ligase Arkadia chr4 - View
Daucus carota DCAR_017116 hypothetical protein DCARv2_Chr5 - View
Daucus carota DCAR_013131 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv20220 GWHABJS00000013 + View
Davidia involucrata Dinv14954 GWHABJS00000001 - View
Durio zibethinus Duzib170G0195 NW_019167871.1 + View
Durio zibethinus Duzib268G0814 NW_019168270.1 + View
Durio zibethinus Duzib213G0202 NW_019167993.1 + View
Erigeron canadensis ECA236G3472 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA234G2251 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.F01182 Chr06 + View
Erythranthe guttata Migut.M00762 scaffold_13 - View
Erythranthe guttata Migut.H01966 scaffold_8 + View
Eutrema salsugineum Thhalv10020603m.g PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED scaffold_13 + View
Fragaria x ananassa FAN25G2906 PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Fvb3-1 + View
Fragaria x ananassa FAN21G2982 PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Fvb3-2 + View
Fragaria x ananassa FAN16G0483 PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Fvb3-3 - View
Fragaria x ananassa FAN11G2980 PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Fvb3-4 + View
Fragaria vesca FvH4_3g19090 3.1.3.13//5.4.2.11//5.4.2.4 - Bisphosphoglycerate phosphatase // Phosphoglycerate mutase (2,3-diphosphoglycerate-dependent) / Phosphoglyceromutase // Bisphosphoglycerate mutase / Glycerate phosphomutase Fvb3 - View
Gossypium hirsutum Gohir.A01G059800 PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED A01 - View
Gossypium hirsutum Gohir.A13G147800 PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED A13 + View
Gossypium hirsutum Gohir.D13G152400 PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED D13 + View
Gossypium hirsutum Gohir.A11G286700 PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED A11 - View
Gossypium hirsutum Gohir.D01G046200 PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED D01 - View
Glycine max Glyma.13G272700 K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) Gm13 + View
Glycine max Glyma.06G234300 K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) Gm06 - View
Gossypium raimondii Gorai.013G172300 Chr13 + View
Gossypium raimondii Gorai.002G065600 Chr02 - View
Helianthus annuus HanXRQChr10g0302391 Probable RING/U-box superfamily protein HanXRQChr10 - View
Helianthus annuus HanXRQChr03g0070961 Putative zinc finger, RING/FYVE/PHD-type HanXRQChr03 + View
Hydrangea macrophylla Hma1.2p1_0416F.1_g148540 Hma1.2p1_0416F.1 + View
Lupinus albus Lalb_Chr20g0109431 K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) Lalb_Chr20 - View
Lupinus albus Lalb_Chr25g0286151 K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) Lalb_Chr25 - View
Lupinus albus Lalb_Chr19g0134011 PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr19 - View
Lupinus albus Lalb_Chr01g0006661 PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr01 + View
Lotus japonicus Lj3g0014756 PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED chr3 + View
Lonicera japonica Lj1C836T14 GWHAAZE00000001 - View
Lactuca sativa Lsat_1_v5_gn_5_128721 Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_7_103700 Lsat_1_v8_lg_7 - View
Magnolia biondii MBI07_g06443_MAGBIO AED:0.09 Chr07 + View
Malus domestica MD11G1257600 RING/U-box superfamily protein Chr11 + View
Malus domestica MD03G1237000 RING/U-box superfamily protein Chr03 + View
Manihot esculenta Manes.03G104000 Chromosome03 - View
Manihot esculenta Manes.15G090400 Chromosome15 + View
Medicago truncatula Medtr2g078440 zinc finger, C3HC4 type (RING finger) protein chr2 - View
Nelumbo nucifera Nn1g06360 chr1 - View
Olea europaea Oeu060566.1 chr4 + View
Olea europaea Oeu025348.1 chr19 - View
Petunia axillaris Peaxi162Scf00069g01933 Unknown protein Peaxi162Scf00069 + View
Petunia axillaris Peaxi162Scf00000g02711 RING/U-box superfamily protein Peaxi162Scf00000 - View
Punica granatum PGR083G0122 NC_045133.1 + View
Prunus persica Prupe.4G172400 PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Pp04 - View
Pisum sativum Psat5g241040 Ring finger domain chr5LG3 - View
Papaver somniferum PSO832G1249 NC_039367.1 - View
Papaver somniferum PSO210G6478 NC_039359.1 - View
Papaver somniferum PSO541G5393 NC_039363.1 - View
Populus trichocarpa Potri.011G097100 K10635 - E3 ubiquitin-protein ligase Arkadia [EC:6.3.2.19] (RNF111) Chr11 - View
Populus trichocarpa Potri.001G373700 PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Chr01 + View
Phaseolus vulgaris Phvul.005G068800 K19041 - E3 ubiquitin-protein ligase RNF38/44 [EC:6.3.2.19] (RNF38_44) Chr05 - View
Quercus lobata QL08p023141 8 - View
Rosa chinensis RcHm_v2.0_Chr5g0031881 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim04G0023500 chr04 + View
Rhododendron simsii Rhsim06G0203900 chr06 + View
Rhododendron simsii Rhsim04G0072200 chr04 + View
Salix brachista Sabra11G0090200 GWHAAZH00000011 - View
Salix brachista Sabra16G0246100 GWHAAZH00000016 + View
Simmondsia chinensis Sc16g0007360 GWHAASQ00000016 + View
Sechium edule Sed0003262 LG13 + View
Solanum lycopersicum Solyc12g014070.2 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1L356_ARTAN) SL4.0ch12 + View
Solanum lycopersicum Solyc10g007140.3 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1L356_ARTAN) SL4.0ch10 + View
Solanum lycopersicum Solyc07g062720.3 RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1L356_ARTAN) SL4.0ch07 - View
Schrenkiella parvula Sp3g13270 PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED ch3-1 - View
Solanum pennellii Sopen07g030950 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch07 - View
Solanum pennellii Sopen12g005840 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch12 + View
Solanum tuberosum PGSC0003DMG400012437 Ring finger protein ST4.03ch07 - View
Solanum tuberosum PGSC0003DMG401015329 Ring finger protein ST4.03ch12 - View
Trochodendron aralioides TAR627G0605 group6 + View
Theobroma cacao Thecc.07G100600 Ring finger protein Chromosome_7 + View
Tarenaya hassleriana THA.LOC104815565 E3 ubiquitin-protein ligase arkadia-C-like isoform X1 NW_010965696.1 + View
Tarenaya hassleriana THA.LOC104810450 uncharacterized protein LOC104810450 NW_010965216.1 - View
Tarenaya hassleriana THA.LOC104798754 E3 ubiquitin-protein ligase MBR2-like NW_010968273.1 - View
Tripterygium wilfordii TWI39G1123 NC_052250.1 - View
Vaccinium macrocarpon vmacro09511 Similar to ZFP1: Probable E3 ubiquitin-protein ligase ZFP1 (Oryza sativa subsp. japonica OX%3D39947) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G0860 CM024079.1 + View
Vitis vinifera GSVIVG01014254001 chr19 - View