Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold122G33329 scaffold122 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G1200 LG-8 - View
Acer truncatum Atru.chr1.3907 chr1 + View
Acer truncatum Atru.chr7.1661 chr7 + View
Actinidia chinensis Actinidia26034 Lachesis_group2 - View
Actinidia chinensis Actinidia32176 Lachesis_group27 + View
Arabidopsis lyrata AL3G26200 scaffold_3 - View
Arabidopsis lyrata AL1G62900 scaffold_1 + View
Avicennia marina MSTRG.10964 ScioBoG_14204_HRSCAF_14270 - View
Avicennia marina MSTRG.22554 ScioBoG_3703_HRSCAF_3719 - View
Avicennia marina MSTRG.9514 ScioBoG_12795_HRSCAF_12848 + View
Amaranthus hybridus Ah.08g216660 Protein Brevis radix-like 2 (AtBRXL2) AmaHy_arrow1_Scaffold_8 + View
Aquilegia oxysepala Aqoxy7G04105 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9D95UI PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) arahy.Tifrunner.gnm1.Arahy.01 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.0Z6569 PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) arahy.Tifrunner.gnm1.Arahy.11 + View
Arabidopsis thaliana AT3G14000 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others%2C with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. ATBRXL2%3B CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591)%3B BEST Arabidopsis thaliana protein match is: BREVIS RADIX-like 3 (TAIR:AT1G54180.2)%3B Has 725 Blast hits to 435 proteins in 44 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2%3B Fungi - 15%3B Plants - 701%3B Viruses - 0%3B Other Eukaryotes - 7 (source: NCBI BLink). ATBRXL2%3B CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591)%3B BEST Arabidopsis thaliana protein match is: BREVIS RADIX-like 3 (TAIR:AT1G54180.2)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT1G54180 BREVIS RADIX-like 3 Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others%2C with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BREVIS RADIX-like 3 (BRX-LIKE3)%3B CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591)%3B BEST Arabidopsis thaliana protein match is: DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein (TAIR:AT3G14000.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). BREVIS RADIX-like 3 (BRX-LIKE3)%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Disease resistance/zinc finger/chromosome condensation-like region (InterPro:IPR013591)%3B BEST Arabidopsis thaliana protein match is: DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein (TAIR:AT3G14000.2)%3B Has 729 Blast hits to 418 proteins in 28 species: Archae - 0%3B Bacteria - 1%3B Metazoa - 0%3B Fungi - 0%3B Plants - 726%3B Viruses - 0%3B Other Eukaryotes - 2 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC05g29130 ChrC05 + View
Brassica carinata BcaC08g43598 ChrC08 + View
Brassica carinata BcaB06g25411 ChrB06 + View
Brassica napus C01p50580 C01 + View
Brassica napus C05p53650 C05 + View
Brassica napus A05p35410 A05 + View
Brassica napus A01p39620 A01 + View
Brassica oleracea BolC6t36069H C6 + View
Brassica oleracea BolC1t05008H C1 + View
Brassica oleracea BolC5t34038H C5 + View
Brassica rapa BraA01t04003Z A01 + View
Brassica rapa BraA05t22351Z A05 + View
Beta vulgaris EL10Ac7g16395 PTHR22870//PTHR22870:SF190 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED Chr7_EL10_PGA_scaffold5 + View
Camellia sinensis var. sinensis CSS0017839 PREDICTED: protein Brevis radix-like 2 isoform X4 [Nelumbo nucifera] Chr15 - View
Corylus avellana Haze_25968 Similar to BRXL4: Protein Brevis radix-like 4 (Arabidopsis thaliana OX%3D3702) 8 + View
Coffea canephora Cc04_g01460 Protein Brevis radix-like 2 chr4 - View
Citrus clementina Ciclev10025865m.g scaffold_7 + View
Citrus clementina Ciclev10008657m.g scaffold_1 - View
Ceratophyllum demersum CDE11G0473 9 + View
Ceratophyllum demersum CDE05G0748 3 + View
Cardamine hirsuta CARHR044530 BREVIS RADIX-like 3 Chr1 + View
Cardamine hirsuta CARHR088810 BREVIS RADIX-like 3 Chr3 - View
Carya illinoinensis CiPaw.01G220800 PTHR22870//PTHR22870:SF190 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED Chr01 - View
Carya illinoinensis CiPaw.04G146500 PTHR22870:SF166 - PROTEIN RCC2 Chr04 + View
Citrullus lanatus ClCG09G000900 BREVIS RADIX-like 4 LENGTH=384 CG_Chr09 + View
Cucumis melo MELO3C024363.2 Protein BREVIS RADIX chr01 - View
Carica papaya Cpa.g.sc25.99 supercontig_25 + View
Chenopodium quinoa AUR62001499 BRXL2: Protein Brevis radix-like 2 C_Quinoa_Scaffold_2716 - View
Chenopodium quinoa AUR62009871 BRXL2: Protein Brevis radix-like 2 C_Quinoa_Scaffold_2493 + View
Capsella rubella Carub.0003s1358 PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) scaffold_3 - View
Capsella rubella Carub.0001s4342 PTHR22870//PTHR22870:SF190 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED scaffold_1 + View
Cucumis sativus L. CsaV3_7G034570 Brevis radix-like protein chr7 - View
Daucus carota DCAR_016130 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv37876 GWHABJS00000006 + View
Davidia involucrata Dinv42367 GWHABJS00000013 + View
Davidia involucrata Dinv04025 GWHABJS00000019 + View
Durio zibethinus Duzib192G0275 NW_019168037.1 - View
Durio zibethinus Duzib235G0046 NW_019167982.1 + View
Durio zibethinus Duzib160G0676 NW_019168015.1 + View
Eucalyptus grandis Eucgr.J02830 Chr10 - View
Eucalyptus grandis Eucgr.C00839 Chr03 - View
Erythranthe guttata Migut.I01061 scaffold_9 + View
Erythranthe guttata Migut.L01542 scaffold_12 + View
Eutrema salsugineum Thhalv10012174m.g scaffold_7 - View
Fragaria x ananassa FAN05G4408 PTHR22870//PTHR22870:SF166 - REGULATOR OF CHROMOSOME CONDENSATION // PROTEIN RCC2 Fvb6-3 - View
Fragaria x ananassa FAN14G4010 PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) Fvb6-1 - View
Fragaria x ananassa FAN02G1007 PTHR22870:SF166 - PROTEIN RCC2 Fvb6-4 + View
Fragaria x ananassa FAN09G4189 PTHR22870//PTHR22870:SF166 - REGULATOR OF CHROMOSOME CONDENSATION // PROTEIN RCC2 Fvb6-2 - View
Fragaria vesca FvH4_6g34460 PTHR22870//PTHR22870:SF166 - REGULATOR OF CHROMOSOME CONDENSATION // PROTEIN RCC2 Fvb6 + View
Gossypium hirsutum Gohir.D05G139600 PTHR22870//PTHR22870:SF166 - REGULATOR OF CHROMOSOME CONDENSATION // PROTEIN RCC2 D05 + View
Gossypium hirsutum Gohir.A05G137500 PTHR22870//PTHR22870:SF166 - REGULATOR OF CHROMOSOME CONDENSATION // PROTEIN RCC2 A05 + View
Glycine max Glyma.13G108200 PTHR22870//PTHR22870:SF166 - REGULATOR OF CHROMOSOME CONDENSATION // PROTEIN RCC2 Gm13 + View
Glycine max Glyma.16G005900 PTHR22870//PTHR22870:SF166 - REGULATOR OF CHROMOSOME CONDENSATION // PROTEIN RCC2 Gm16 + View
Gossypium raimondii Gorai.009G143900 Chr09 + View
Helianthus annuus HanXRQChr10g0312431 Probable DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain conta HanXRQChr10 + View
Helianthus annuus HanXRQChr12g0360451 Putative brevis radix (BRX) domain; Transcription factor BREVIS RADIX, N-terminal domain HanXRQChr12 - View
Hydrangea macrophylla Hma1.2p1_0291F.1_g115220 Hma1.2p1_0291F.1 - View
Lupinus albus Lalb_Chr04g0263351 PTHR22870//PTHR22870:SF190 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED Lalb_Chr04 + View
Lupinus albus Lalb_Chr25g0281151 PTHR22870//PTHR22870:SF166 - REGULATOR OF CHROMOSOME CONDENSATION // PROTEIN RCC2 Lalb_Chr25 + View
Lotus japonicus Lj6g0024479 PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) chr6 - View
Lotus japonicus Lj3g0013530 PTHR22870//PTHR22870:SF190 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED chr3 + View
Lonicera japonica Lj9A522G67 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_1_37481 PTHR22870//PTHR22870:SF190 - REGULATOR OF CHROMOSOME CONDENSATION // SUBFAMILY NOT NAMED Lsat_1_v8_lg_1 + View
Lactuca sativa Lsat_1_v5_gn_5_135760 Lsat_1_v8_lg_5 + View
Malus domestica MD15G1213600 BREVIS RADIX-like 4 Chr15 + View
Malus domestica MD02G1086500 BREVIS RADIX-like 4 Chr02 + View
Malus domestica MD09G1186000 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein Chr09 - View
Manihot esculenta Manes.04G143000 Chromosome04 + View
Manihot esculenta Manes.11G022000 Chromosome11 - View
Medicago truncatula Medtr8g019620 brevis radix-like protein chr8 + View
Nelumbo nucifera Nn6g35586 chr6 + View
Punica granatum PGR102G3112 NC_045129.1 + View
Prunus persica Prupe.7G203300 Pp07 - View
Prunus persica Prupe.3G043800 PTHR22870:SF166 - PROTEIN RCC2 Pp03 - View
Populus trichocarpa Potri.001G170800 PTHR22870//PTHR22870:SF166 - REGULATOR OF CHROMOSOME CONDENSATION // PROTEIN RCC2 Chr01 - View
Populus trichocarpa Potri.003G063200 PTHR22870//PTHR22870:SF166 - REGULATOR OF CHROMOSOME CONDENSATION // PROTEIN RCC2 Chr03 + View
Phaseolus vulgaris Phvul.003G132900 PTHR22870:SF166 - PROTEIN RCC2 Chr03 - View
Quercus lobata QL05p008514 5 - View
Quercus lobata QL02p061102 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr2g0094271 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0237200 chr08 + View
Salvia bowleyana SalBow6G0788 GWHASIU00000002 + View
Salix brachista Sabra01G0140400 GWHAAZH00000001 + View
Salix brachista Sabra03G0036900 GWHAAZH00000003 + View
Simmondsia chinensis Sc12g0010500 GWHAASQ00000012 + View
Sechium edule Sed0015948 LG09 - View
Sechium edule Sed0009508 LG04 - View
Schrenkiella parvula Sp3g12250 PF08381//PF13713 - Transcription factor regulating root and shoot growth via Pin3 (BRX) // Transcription factor BRX N-terminal domain (BRX_N) ch3-1 - View
Solanum tuberosum PGSC0003DMG401004858 Ran GTPase binding protein ST4.03ch06 - View
Selenicereus undatus Hund18692 Scaffold_33675 - View
Trochodendron aralioides TAR624G0757 group9 + View
Trochodendron aralioides TAR626G1277 group3 - View
Trochodendron aralioides TAR383G0287 group10 + View
Theobroma cacao Thecc.06G117900 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein Chromosome_6 + View
Theobroma cacao Thecc.09G081200 BREVIS RADIX-like 4 Chromosome_9 - View
Tarenaya hassleriana THA.LOC104815627 protein Brevis radix-like 3 NW_010965696.1 + View
Trifolium pratense TPR.G16441 Tp57577_TGAC_v2_LG6 + View
Trifolium pratense TPR.G31542 Tp57577_TGAC_v2_LG5 + View
Vaccinium macrocarpon vmacro15020 Similar to BRXL4: Protein Brevis radix-like 4 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro17174 Similar to BRXL4: Protein Brevis radix-like 4 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0331G0933 CM024078.1 + View
Vigna mungo VMungo1215G1799 CM024074.1 + View
Vitis vinifera GSVIVG01015117001 chr11 - View
Vitis vinifera GSVIVG01016782001 chr9 - View
Zea mays Zm00001eb100340 Zm00001e009904 Protein Brevis radix-like 4 2 + View