Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG5G11510 | LG-5 | - | View | |
Acer truncatum | Atru.chr8.2400 | chr8 | + | View | |
Acer truncatum | Atru.chr12.176 | chr12 | + | View | |
Actinidia chinensis | Actinidia07795 | Lachesis_group21 | + | View | |
Actinidia chinensis | Actinidia33869 | Lachesis_group3 | + | View | |
Arabidopsis lyrata | AL6G15120 | scaffold_6 | - | View | |
Arabidopsis lyrata | AL6G10154 | scaffold_6 | - | View | |
Amaranthus hybridus | Ah.12g064360 | RING-H2 finger protein ATL73 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase ATL73) | AmaHy_arrow1_Scaffold_12 | + | View |
Amaranthus hybridus | Ah.08g209440 | AmaHy_arrow1_Scaffold_8 | - | View | |
Aquilegia oxysepala | Aqoxy4G02406 | CHR04 | + | View | |
Arabidopsis thaliana | AT5G05280 | RING/U-box superfamily protein Encodes a RING-finger E3 ligase protein that controls anther dehiscence by positively regulating the expression of DAD1 in the jasmonic acid biosynthesis pathway. RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G10910.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). | Chr5 | - | View |
Arabidopsis thaliana | AT5G01880 | RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: LP.04 four leaves visible%2C 4 anthesis%2C C globular stage%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G10910.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). | Chr5 | + | View |
Amborella trichopoda | ATR1127G124 | AmTr_v1.0_scaffold00077 | + | View | |
Brassica carinata | BcaC06g32237 | ChrC06 | - | View | |
Camellia sinensis var. sinensis | CSS0038949 | RING/U-box superfamily protein [Theobroma cacao] | Chr7 | + | View |
Camellia sinensis var. sinensis | CSS0048169 | zinc finger family protein [Populus trichocarpa] | Chr4 | + | View |
Cannabis sativa | CANSAT35G0415 | NC_044378.1 | - | View | |
Corylus avellana | Haze_21171 | Similar to ATL72: RING-H2 finger protein ATL72 (Arabidopsis thaliana OX%3D3702) | 10 | + | View |
Corylus avellana | Haze_17354 | Similar to ATL72: RING-H2 finger protein ATL72 (Arabidopsis thaliana OX%3D3702) | 11 | + | View |
Coffea canephora | Cc01_g15310 | RING-H2 finger protein ATL73 | chr1 | + | View |
Coffea canephora | Cc02_g05400 | RING-H2 finger protein ATL72 | chr2 | - | View |
Citrus clementina | Ciclev10013579m.g | scaffold_6 | + | View | |
Citrus clementina | Ciclev10032803m.g | scaffold_4 | + | View | |
Ceratophyllum demersum | CDE04G1355 | 2 | - | View | |
Cardamine hirsuta | CARHR207970 | Ring finger protein, putative | Chr6 | + | View |
Carya illinoinensis | CiPaw.01G306400 | K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) | Chr01 | + | View |
Carya illinoinensis | CiPaw.09G220900 | PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED | Chr09 | + | View |
Citrullus lanatus | ClCG10G022690 | Ring finger protein, putative | CG_Chr10 | + | View |
Citrullus lanatus | ClCG11G005680 | Ring finger protein, putative | CG_Chr11 | - | View |
Cucumis melo | MELO3C020006.2 | RING-H2 finger protein ATL74-like | chr03 | - | View |
Cucumis melo | MELO3C009107.2 | RING-H2 finger protein ATL74-like | chr04 | + | View |
Cucumis melo | MELO3C025221.2 | RING-H2 finger protein ATL74 | chr08 | - | View |
Carica papaya | Cpa.g.sc19.61 | supercontig_19 | - | View | |
Chenopodium quinoa | AUR62006389 | ATL72: RING-H2 finger protein ATL72 | C_Quinoa_Scaffold_1001 | + | View |
Chenopodium quinoa | AUR62030613 | ATL73: RING-H2 finger protein ATL73 | C_Quinoa_Scaffold_3631 | - | View |
Capsella rubella | Carub.0006s0421 | PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED | scaffold_6 | - | View |
Cucumis sativus L. | CsaV3_6G002290 | RING-H2 finger protein | chr6 | + | View |
Daucus carota | DCAR_028914 | hypothetical protein | DCARv2_Chr8 | + | View |
Davidia involucrata | Dinv34480 | GWHABJS00000009 | - | View | |
Davidia involucrata | Dinv21844 | GWHABJS00000004 | - | View | |
Davidia involucrata | Dinv12279 | GWHABJS00000007 | + | View | |
Davidia involucrata | Dinv25338 | GWHABJS00000012 | + | View | |
Davidia involucrata | Dinv11359 | GWHABJS00000015 | + | View | |
Durio zibethinus | Duzib128G1611 | NW_019168481.1 | - | View | |
Durio zibethinus | Duzib168G2277 | NW_019168159.1 | + | View | |
Durio zibethinus | Duzib114G1032 | NW_019167926.1 | - | View | |
Durio zibethinus | Duzib106G0322 | NW_019168492.1 | + | View | |
Durio zibethinus | Duzib212G0890 | NW_019168026.1 | - | View | |
Durio zibethinus | Duzib268G1668 | NW_019168270.1 | - | View | |
Durio zibethinus | Duzib151G0647 | NW_019167904.1 | - | View | |
Erigeron canadensis | ECA232G3641 | Conyza_canadensis_scaffold:2 | + | View | |
Erigeron canadensis | ECA236G3767 | Conyza_canadensis_scaffold:3 | + | View | |
Eucalyptus grandis | Eucgr.J00118 | Chr10 | - | View | |
Erythranthe guttata | Migut.F00605 | scaffold_6 | + | View | |
Erythranthe guttata | Migut.N00731 | scaffold_14 | - | View | |
Erythranthe guttata | Migut.F01246 | scaffold_6 | - | View | |
Fragaria x ananassa | FAN02G1111 | PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED | Fvb6-4 | - | View |
Fragaria x ananassa | FAN09G2450 | PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED | Fvb6-2 | + | View |
Fragaria x ananassa | FAN06G0299 | K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) | Fvb7-2 | + | View |
Fragaria x ananassa | FAN10G1034 | PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED | Fvb7-1 | + | View |
Fragaria x ananassa | FAN05G5793 | PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED | Fvb6-3 | + | View |
Fragaria x ananassa | FAN05G4890 | PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED | Fvb6-3 | - | View |
Fragaria x ananassa | FAN01G0201 | PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED | Fvb7-4 | - | View |
Fragaria vesca | FvH4_6g09940 | K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) | Fvb6 | - | View |
Fragaria vesca | FvH4_7g25880 | PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED | Fvb7 | + | View |
Gossypium hirsutum | Gohir.D02G004050 | PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED | D02 | - | View |
Gossypium hirsutum | Gohir.A10G150400 | PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED | A10 | + | View |
Gossypium hirsutum | Gohir.A02G003650 | PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED | A02 | - | View |
Gossypium hirsutum | Gohir.D10G186400 | K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) | D10 | + | View |
Gossypium hirsutum | Gohir.A10G179700 | K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) | A10 | + | View |
Gossypium hirsutum | Gohir.D10G115900 | PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED | D10 | - | View |
Glycine max | Glyma.06G143100 | K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) | Gm06 | - | View |
Glycine max | Glyma.04G222300 | K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) | Gm04 | + | View |
Glycine max | Glyma.09G275300 | PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED | Gm09 | - | View |
Glycine max | Glyma.18G214200 | PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED | Gm18 | - | View |
Gossypium raimondii | Gorai.011G209400 | Chr11 | + | View | |
Gossypium raimondii | Gorai.011G127700 | Chr11 | - | View | |
Gossypium raimondii | Gorai.005G004600 | Chr05 | - | View | |
Lupinus albus | Lalb_Chr08g0239151 | K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) | Lalb_Chr08 | + | View |
Lupinus albus | Lalb_Chr11g0067801 | PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED | Lalb_Chr11 | - | View |
Lotus japonicus | Lj1g0026066 | PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED | chr1 | + | View |
Lonicera japonica | Lj8C55G14 | GWHAAZE00000008 | - | View | |
Lonicera japonica | Lj2P1101T15 | GWHAAZE00000002 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_9_59920 | Lsat_1_v8_lg_9 | - | View | |
Magnolia biondii | MBI15_g08961_MAGBIO | AED:0.01 | Chr15 | + | View |
Malus domestica | MD07G1233300 | RING/U-box superfamily protein | Chr07 | + | View |
Malus domestica | MD12G1187900 | RING/U-box superfamily protein | Chr12 | + | View |
Malus domestica | MD04G1174300 | RING/U-box superfamily protein | Chr04 | + | View |
Malus domestica | MD01G1167200 | RING/U-box superfamily protein | Chr01 | + | View |
Manihot esculenta | Manes.08G171500 | Chromosome08 | - | View | |
Manihot esculenta | Manes.10G001200 | Chromosome10 | - | View | |
Manihot esculenta | Manes.09G117400 | Chromosome09 | + | View | |
Manihot esculenta | Manes.07G140800 | Chromosome07 | + | View | |
Medicago truncatula | Medtr3g094000 | RING-H2 zinc finger protein | chr3 | - | View |
Nelumbo nucifera | Nn2g10313 | chr2 | - | View | |
Nelumbo nucifera | Nn5g26854 | chr5 | - | View | |
Oryza sativa ssp. japonica | Os05g0478000 | Zinc finger, RING/FYVE/PHD-type domain containing protein. | chr05 | + | View |
Oryza sativa ssp. japonica | Os11g0116200 | Similar to nonspecific lipid-transfer protein 3. Similar to Zinc finger, C3HC4 type family protein, expressed. | chr11 | + | View |
Oryza sativa ssp. japonica | Os01g0822800 | Similar to RING-H2 finger protein ATL3C. | chr01 | - | View |
Petunia axillaris | Peaxi162Scf00304g00053 | RING/U-box superfamily protein | Peaxi162Scf00304 | + | View |
Petunia axillaris | Peaxi162Scf00739g00034 | RING/U-box superfamily protein | Peaxi162Scf00739 | + | View |
Petunia axillaris | Peaxi162Scf00732g00337 | Unknown protein | Peaxi162Scf00732 | - | View |
Punica granatum | PGR142G0937 | NC_045128.1 | + | View | |
Punica granatum | PGR044G0975 | NC_045134.1 | + | View | |
Prunus persica | Prupe.2G263800 | K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) | Pp02 | + | View |
Prunus persica | Prupe.6G293100 | K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) | Pp06 | + | View |
Pisum sativum | Psat5g069240 | Ring finger domain | chr5LG3 | + | View |
Papaver somniferum | PSO384G1196 | NC_039368.1 | - | View | |
Populus trichocarpa | Potri.019G130100 | PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED | Chr19 | + | View |
Populus trichocarpa | Potri.019G057700 | K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) | Chr19 | + | View |
Populus trichocarpa | Potri.013G091300 | K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) | Chr13 | - | View |
Populus trichocarpa | Potri.013G157000 | PTHR14155//PTHR14155:SF74 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL45-RELATED | Chr13 | + | View |
Populus trichocarpa | Potri.016G136200 | K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) | Chr16 | + | View |
Phaseolus vulgaris | Phvul.008G083200 | K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) | Chr08 | - | View |
Phaseolus vulgaris | Phvul.009G143000 | K19040 - E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:6.3.2.19] (ATL76S) | Chr09 | + | View |
Quercus lobata | QL08p064794 | 8 | + | View | |
Quercus lobata | QL07p032181 | 7 | - | View | |
Rosa chinensis | RcHm_v2.0_Chr1g0372171 | RcHm_v2.0_Chr1 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr3g0460531 | RcHm_v2.0_Chr3 | - | View | |
Rhododendron simsii | Rhsim09G0185700 | chr09 | + | View | |
Rhododendron simsii | Rhsim01G0243000 | chr01 | + | View | |
Rhododendron simsii | Rhsim13G0059800 | chr13 | - | View | |
Rhododendron simsii | Rhsim05G0230400 | chr05 | + | View | |
Salix brachista | Sabra19G0073400 | GWHAAZH00000019 | + | View | |
Salix brachista | Sabra19G0127000 | GWHAAZH00000019 | + | View | |
Sechium edule | Sed0026126 | LG11 | - | View | |
Sechium edule | Sed0020122 | LG02 | - | View | |
Solanum lycopersicum | Solyc06g049030.4 | RING/U-box superfamily protein (AHRD V3.3 *** A0A2U1QK74_ARTAN) | SL4.0ch06 | - | View |
Solanum pennellii | Sopen06g015390 | RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein | Spenn-ch06 | - | View |
Solanum tuberosum | PGSC0003DMG400016637 | RING-H2 finger protein ATL3C | ST4.03ch06 | + | View |
Trochodendron aralioides | TAR636G3195 | group1 | - | View | |
Trochodendron aralioides | TAR623G0869 | group7 | - | View | |
Trochodendron aralioides | TAR633G0720 | group2 | + | View | |
Trochodendron aralioides | TAR369G0072 | group18 | - | View | |
Theobroma cacao | Thecc.04G152400 | RING/U-box superfamily protein | Chromosome_4 | - | View |
Theobroma cacao | Thecc.09G363700 | RING/U-box superfamily protein | Chromosome_9 | + | View |
Theobroma cacao | Thecc.10G181500 | Chromosome_10 | - | View | |
Tarenaya hassleriana | THA.LOC104816685 | RING-H2 finger protein ATL73 | NW_010965775.1 | - | View |
Tripterygium wilfordii | TWI09G1458 | NC_052245.1 | - | View | |
Tripterygium wilfordii | TWI73G1284 | NC_052232.1 | + | View | |
Tripterygium wilfordii | TWI77G0379 | NC_052236.1 | + | View | |
Vaccinium macrocarpon | vmacro09961 | Similar to ATL72: RING-H2 finger protein ATL72 (Arabidopsis thaliana OX%3D3702) | chr8_Vaccinium_macrocarpon_Stevens_v1 | - | View |
Vigna mungo | VMungo1309G1231 | CM024072.1 | - | View | |
Vanilla planifolia | HPP92_017914 | Ring finger protein, putative *-* | CM028158.1 | - | View |
Vitis vinifera | GSVIVG01032684001 | chr13 | - | View | |
Zea mays | Zm00001eb149500 | Zm00001e019438 RING-H2 finger protein ATL74 | 3 | + | View |