Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold37G14754 scaffold37 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr1.2876 chr1 - View
Actinidia chinensis Actinidia01731 Lachesis_group1 + View
Actinidia chinensis Actinidia18216 Lachesis_group13 - View
Arabidopsis lyrata AL1G27380 scaffold_1 - View
Avicennia marina MSTRG.22757 ScioBoG_3703_HRSCAF_3719 + View
Avicennia marina MSTRG.11154 ScioBoG_14204_HRSCAF_14270 + View
Amaranthus hybridus Ah.01g020470 Protein TSS (TPR-domain suppressor of STIMPY) AmaHy_arrow1_Scaffold_1 - View
Aquilegia oxysepala Aqoxy7G03611 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.759A9K PTHR12601//PTHR12601:SF18 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN arahy.Tifrunner.gnm1.Arahy.18 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5A67KA KOG1839 - Uncharacterized protein CLU1/cluA/TIF31 involved in mitochondrial morphology/distribution, also found associated with eIF-3 arahy.Tifrunner.gnm1.Arahy.07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JY1AQN K03255 - protein TIF31 (TIF31, CLU1) arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MI82BM K03255 - protein TIF31 (TIF31, CLU1) arahy.Tifrunner.gnm1.Arahy.19 - View
Arabidopsis thaliana AT1G15290 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%2C Tetratricopeptide repeat (InterPro:IPR019734)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT4G28080.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC05g25466 ChrC05 - View
Brassica napus C05p13420 C05 - View
Brassica napus A06p11290 A06 - View
Brassica oleracea BolC5t30079H C5 - View
Brassica rapa BraA06t24309Z A06 - View
Beta vulgaris EL10Ac9g21887 PTHR12601//PTHR12601:SF18 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0018555 PREDICTED: clustered mitochondria protein homolog [Vitis vinifera] Chr15 + View
Cannabis sativa CANSAT56G1961 NC_044371.1 + View
Corylus avellana Haze_16583 Similar to TSS: Protein TSS (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc04_g04580 Tetratricopeptide repeat (TPR)-like superfamily protein chr4 + View
Citrus clementina Ciclev10024689m.g scaffold_7 + View
Carpinus fangiana Cfa001943 Cfa01 - View
Cardamine hirsuta CARHR015820 Tetratricopeptide repeat-containing protein Chr1 - View
Carya illinoinensis CiPaw.01G249900 PTHR12601//PTHR12601:SF18 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Chr01 + View
Citrullus lanatus ClCG09G003050 Clustered mitochondria protein homolog CG_Chr09 + View
Cucumis melo MELO3C023435.2 Tetratricopeptide repeat (TPR)-like superfamily protein chr01 - View
Chenopodium quinoa AUR62011502 TSS: Protein TSS C_Quinoa_Scaffold_3333 - View
Chenopodium quinoa AUR62016318 TSS: Protein TSS C_Quinoa_Scaffold_3514 - View
Capsella rubella Carub.0001s1505 PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN scaffold_1 - View
Cucumis sativus L. CsaV3_7G032240 Tetratricopeptide repeat (TPR)-like superfamily protein chr7 - View
Daucus carota DCAR_016272 hypothetical protein DCARv2_Chr5 + View
Daucus carota DCAR_021354 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv30627 GWHABJS00000019 - View
Davidia involucrata Dinv38136 GWHABJS00000006 - View
Durio zibethinus Duzib160G0155 NW_019168015.1 - View
Erigeron canadensis ECA232G4532 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.F03906 Chr06 + View
Erythranthe guttata Migut.I00746 scaffold_9 - View
Eutrema salsugineum Thhalv10006547m.g PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN scaffold_5 + View
Fragaria x ananassa FAN05G2344 PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Fvb6-3 + View
Fragaria x ananassa FAN14G5647 PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Fvb6-1 + View
Fragaria x ananassa FAN02G0271 PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Fvb6-4 + View
Fragaria vesca FvH4_6g29390 PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Fvb6 - View
Gossypium hirsutum Gohir.A06G184100 PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN A06 - View
Gossypium hirsutum Gohir.A06G115500 K03255 - protein TIF31 (TIF31, CLU1) A06 + View
Glycine max Glyma.07G028800 PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Gm07 - View
Glycine max Glyma.08G214000 PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Gm08 + View
Lupinus albus Lalb_Chr04g0262321 PTHR12601//PTHR12601:SF18 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Lalb_Chr04 - View
Lupinus albus Lalb_Chr22g0350811 PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Lalb_Chr22 - View
Lotus japonicus Lj3g0008042 PTHR12601//PTHR12601:SF18 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 // TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN chr3 + View
Lonicera japonica Lj9C498G15 GWHAAZE00000009 - View
Lonicera japonica Lj5C75G7 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_4_87381 PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Lsat_1_v8_lg_4 - View
Malus domestica MD17G1215200 Tetratricopeptide repeat (TPR)-like superfamily protein Chr17 + View
Manihot esculenta Manes.11G058800 Chromosome11 + View
Manihot esculenta Manes.04G110600 Chromosome04 - View
Nicotiana tabacum Nitab4.5_0000373g0150 Tetratricopeptide repeat, Tetratricopeptide-like helical, Tetratricopeptide repeat-containing domain Nitab4.5_0000373 + View
Petunia axillaris Peaxi162Scf00207g00538 Tetratricopeptide repeat (TPR)-like superfamily protein Peaxi162Scf00207 - View
Punica granatum PGR102G0603 NC_045129.1 - View
Prunus persica Prupe.3G090800 PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Pp03 + View
Pisum sativum Psat7g257480 Translation initiation factor eIF3 subunit 135 chr7LG7 - View
Populus trichocarpa Potri.003G031000 PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Chr03 - View
Phaseolus vulgaris Phvul.010G157200 PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Chr10 + View
Quercus lobata QL05p032089 5 + View
Rosa chinensis RcHm_v2.0_Chr2g0134791 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim08G0211300 chr08 - View
Simmondsia chinensis Sc10g0006030 GWHAASQ00000010 + View
Sechium edule Sed0024441 LG09 - View
Sechium edule Sed0026790 LG07 - View
Solanum lycopersicum Solyc06g068230.4 Tetratricopeptide repeat (TPR)-like superfamily protein (AHRD V3.3 *** A0A2U1MYN5_ARTAN) SL4.0ch06 + View
Schrenkiella parvula Sp1g13610 PTHR12601:SF18 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN ch1-1 - View
Solanum pennellii Sopen06g025510 Tetratricopeptide repeat (TPR)-like superfamily protein | FUNCTIONS IN: binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical , Tetratricopeptide repeat-containing , Tetratricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch06 + View
Solanum tuberosum PGSC0003DMG400028530 Eukaryotic translation initiation factor 3 subunit ST4.03ch06 + View
Selenicereus undatus Hund06549 Scaffold_33676 - View
Trochodendron aralioides TAR636G1701 group1 - View
Theobroma cacao Thecc.06G031200 Eukaryotic translation initiation factor 3 subunit Chromosome_6 + View
Trifolium pratense TPR.G38633 Tp57577_TGAC_v2_LG4 + View
Tripterygium wilfordii TWI12G0105 NC_052243.1 - View
Vaccinium macrocarpon vmacro19014 Similar to TSS: Protein TSS (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0331G0264 CM024078.1 - View
Vitis vinifera GSVIVG01017381001 chr9 + View