Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold37G14782 scaffold37 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G460 LG-4 - View
Acer truncatum Atru.chr1.3016 chr1 - View
Actinidia chinensis Actinidia13242 Lachesis_group18 + View
Actinidia chinensis Actinidia01763 Lachesis_group1 + View
Arabidopsis lyrata AL2G41340 scaffold_2 + View
Avicennia marina MSTRG.11121 ScioBoG_14204_HRSCAF_14270 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.072L8S K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) arahy.Tifrunner.gnm1.Arahy.07 + View
Brassica carinata BcaB05g25294 ChrB05 - View
Brassica oleracea BolC6t38063H C6 - View
Brassica oleracea BolC5t33810H C5 + View
Beta vulgaris EL10Ac9g21931 3.2.1.15 - Polygalacturonase / Pectinase Chr9_EL10_PGA_scaffold8 - View
Camellia sinensis var. sinensis CSS0039642 PREDICTED: probable polygalacturonase At1g80170 isoform X2 [Citrus sinensis] Chr15 - View
Capsicum annuum CAN.G395.50 PGAv.1.6.scaffold395 + View
Cannabis sativa CANSAT56G1742 NC_044371.1 + View
Cicer arietinum L. Ca_01072_v3 Ca_LG1_v3 - View
Corylus avellana Haze_16522 Similar to At1g80170: Probable polygalacturonase At1g80170 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc04_g04140 Probable polygalacturonase At1g80170 chr4 + View
Citrus clementina Ciclev10027523m.g scaffold_7 + View
Carpinus fangiana Cfa001996 Cfa01 - View
Cardamine hirsuta CARHR074310 Pectin lyase-like superfamily protein Chr2 + View
Cardamine hirsuta CARHR090820 Polygalacturonase Chr3 - View
Carya illinoinensis CiPaw.01G245200 3.2.1.15 - Polygalacturonase / Pectinase Chr01 + View
Citrullus lanatus ClCG07G012700 Pectin lyase-like superfamily protein LENGTH=456 CG_Chr07 + View
Citrullus lanatus ClCG09G002770 Pectin lyase-like superfamily protein LENGTH=444 CG_Chr09 + View
Cucumis melo MELO3C023406.2 Polygalacturonase chr01 - View
Corchorus olitorius COL.COLO4_12917 Glycoside hydrolase%2C family 28 AWUE01014981.1 + View
Carica papaya Cpa.g.sc10.230 supercontig_10 + View
Chenopodium quinoa AUR62011550 At1g80170: Probable polygalacturonase At1g80170 C_Quinoa_Scaffold_3333 - View
Chenopodium quinoa AUR62016369 At1g80170: Probable polygalacturonase At1g80170 C_Quinoa_Scaffold_3514 - View
Chenopodium quinoa AUR62012371 rhgA: Probable rhamnogalacturonase A C_Quinoa_Scaffold_1995 - View
Capsella rubella Carub.0002s2737 scaffold_2 - View
Cucumis sativus L. CsaV3_7G032560 Polygalacturonase chr7 - View
Durio zibethinus Duzib150G0016 NW_019167882.1 + View
Durio zibethinus Duzib160G0188 NW_019168015.1 + View
Erigeron canadensis ECA234G3595 Conyza_canadensis_scaffold:4 + View
Eucalyptus grandis Eucgr.J03054 Chr10 + View
Erythranthe guttata Migut.D01059 scaffold_4 + View
Fragaria x ananassa FAN20G3090 3.2.1.15 - Polygalacturonase / Pectinase Fvb2-3 + View
Fragaria x ananassa FAN09G4554 3.2.1.15 - Polygalacturonase / Pectinase Fvb6-2 + View
Fragaria x ananassa FAN24G0161 3.2.1.15 - Polygalacturonase / Pectinase Fvb2-2 - View
Fragaria x ananassa FAN26G2821 3.2.1.15 - Polygalacturonase / Pectinase Fvb1-2 - View
Fragaria x ananassa FAN02G1230 3.2.1.15 - Polygalacturonase / Pectinase Fvb6-4 - View
Fragaria x ananassa FAN14G2353 3.2.1.15 - Polygalacturonase / Pectinase Fvb6-1 + View
Fragaria vesca FvH4_6g30200 3.2.1.15 - Polygalacturonase / Pectinase Fvb6 - View
Fragaria vesca FvH4_2g29242 3.2.1.15 - Polygalacturonase / Pectinase Fvb2 + View
Gossypium hirsutum Gohir.A06G056400 3.2.1.15 - Polygalacturonase / Pectinase A06 + View
Gossypium hirsutum Gohir.A06G186800 3.2.1.15 - Polygalacturonase / Pectinase A06 - View
Gossypium hirsutum Gohir.D06G193000 3.2.1.15 - Polygalacturonase / Pectinase D06 - View
Gossypium hirsutum Gohir.D06G054651 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) D06 + View
Glycine max Glyma.17G209800 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) Gm17 - View
Gossypium raimondii Gorai.010G226900 Chr10 - View
Lupinus albus Lalb_Chr24g0395571 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) Lalb_Chr24 - View
Lupinus albus Lalb_Chr22g0350961 3.2.1.15 - Polygalacturonase / Pectinase Lalb_Chr22 - View
Lotus japonicus Lj3g0022842 K01213 - galacturan 1,4-alpha-galacturonidase (E3.2.1.67) chr3 + View
Lonicera japonica Lj5A70T49 GWHAAZE00000005 - View
Lonicera japonica Lj9A502G36 GWHAAZE00000009 + View
Magnolia biondii MBI04_g07637_MAGBIO AED:0.12 Chr04 + View
Malus domestica MD17G1207200 Pectin lyase-like superfamily protein Chr17 + View
Manihot esculenta Manes.03G015800 Chromosome03 + View
Medicago truncatula Medtr1g012390 polygalacturonase chr1 - View
Medicago truncatula Medtr2g103410 polygalacturonase chr2 + View
Nelumbo nucifera Nn8g39451 chr8 - View
Nelumbo nucifera Nn8g39405 chr8 + View
Nicotiana tabacum Nitab4.5_0001764g0010 Parallel beta-helix repeat, Pectin lyase fold/virulence factor, Glycoside hydrolase, family 28, Pectin lyase fold Nitab4.5_0001764 + View
Punica granatum PGR031G1053 NC_045127.1 - View
Prunus persica Prupe.3G081700 3.2.1.15 - Polygalacturonase / Pectinase Pp03 + View
Pisum sativum Psat5g301280 Glycosyl hydrolases family 28 chr5LG3 - View
Papaver somniferum PSO210G5848 NC_039359.1 + View
Populus trichocarpa Potri.001G171900 3.2.1.15 - Polygalacturonase / Pectinase Chr01 - View
Populus trichocarpa Potri.018G028700 3.2.1.15 - Polygalacturonase / Pectinase Chr18 + View
Populus trichocarpa Potri.006G252900 3.2.1.15 - Polygalacturonase / Pectinase Chr06 - View
Phaseolus vulgaris Phvul.005G175800 3.2.1.15 - Polygalacturonase / Pectinase Chr05 + View
Quercus lobata QL05p028218 5 + View
Rosa chinensis RcHm_v2.0_Chr2g0136441 RcHm_v2.0_Chr2 - View
Rosa chinensis RcHm_v2.0_Chr2g0088471 RcHm_v2.0_Chr2 + View
Salvia bowleyana SalBow2G2168 GWHASIU00000007 - View
Salix brachista Sabra18G0030900 GWHAAZH00000018 + View
Salix brachista Sabra01G0139700 GWHAAZH00000001 + View
Simmondsia chinensis Sc10g0007020 GWHAASQ00000010 - View
Sechium edule Sed0027159 LG06 + View
Sechium edule Sed0012697 LG06 - View
Sechium edule Sed0008390 LG07 - View
Solanum lycopersicum Solyc03g116500.4 polygalacturonase (XOPG1) SL4.0ch03 + View
Solanum lycopersicum Solyc06g068040.3 Pectin lyase-like superfamily protein (AHRD V3.3 *** A0A2U1NJW4_ARTAN) SL4.0ch06 + View
Schrenkiella parvula Sp5g35630 3.2.1.15 - Polygalacturonase / Pectinase ch5-7 + View
Solanum pennellii Sopen06g025320 Pectin lyase-like superfamily protein | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: plant-type cell wall | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectin lyase fold , Glycoside hydrolase, family 28 , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein Spenn-ch06 + View
Solanum pennellii Sopen03g035390 Pectin lyase-like superfamily protein | FUNCTIONS IN: polygalacturonase activity | INVOLVED IN: carbohydrate metabolic process | LOCATED IN: plant-type cell wall | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 6 growth stages | CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor , Pectin lyase fold , Glycoside hydrolase, family 28 , Parallel beta-helix repeat | BEST Arabidopsis thaliana protein match is: Pectin lyase-like superfamily protein Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400000608 Polygalacturonase ST4.03ch03 + View
Selenicereus undatus Hund06574 Scaffold_33676 - View
Theobroma cacao Thecc.06G020900 JHL06P13.4 protein Chromosome_6 - View
Theobroma cacao Thecc.06G070500 Pectin lyase-like superfamily protein Chromosome_6 - View
Tarenaya hassleriana THA.LOC104812499 probable polygalacturonase At1g80170 isoform X1 NW_010965372.1 + View
Tripterygium wilfordii TWI63G0420 NC_052240.1 - View
Tripterygium wilfordii TWI18G0432 NC_052241.1 + View
Vaccinium macrocarpon vmacro11158 Similar to At3g15720: Probable polygalacturonase At3g15720 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro18972 Similar to At1g80170: Probable polygalacturonase At1g80170 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01017279001 chr9 + View
Zea mays Zm00001eb122830 Zm00001e016759 Pectin lyase-like superfamily protein 3 - View