Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold207G41880 scaffold207 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G16330 LG-6 - View
Aethionema arabicum Aa31LG2G15780 LG-2 + View
Acer truncatum Atru.chr5.3154 chr5 - View
Actinidia chinensis Actinidia00581 Lachesis_group12 + View
Actinidia chinensis Actinidia27856 Lachesis_group16 - View
Actinidia chinensis Actinidia20476 Lachesis_group25 + View
Arabidopsis lyrata AL7G16460 scaffold_7 + View
Arabidopsis lyrata AL3G49100 scaffold_3 - View
Arabidopsis lyrata AL7G10760 scaffold_7 + View
Avicennia marina MSTRG.20022 ScioBoG_26180_HRSCAF_26306 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q61L2V K00764 - amidophosphoribosyltransferase (purF, PPAT) arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QCJH2T K02155 - V-type H+-transporting ATPase 16kDa proteolipid subunit (ATPeV0C, ATP6L) arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT4G38880 GLN phosphoribosyl pyrophosphate amidotransferase 3 GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 2 GLN phosphoribosyl pyrophosphate amidotransferase 3 (ASE3)%3B FUNCTIONS IN: amidophosphoribosyltransferase activity%3B INVOLVED IN: purine base biosynthetic process%2C nucleoside metabolic process%2C metabolic process%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase%2C class-II (InterPro:IPR000583)%2C Phosphoribosyltransferase (InterPro:IPR000836)%2C Amidophosphoribosyl transferase (InterPro:IPR005854)%2C Glutamine amidotransferase%2C type II (InterPro:IPR017932)%3B BEST Arabidopsis thaliana protein match is: GLN phosphoribosyl pyrophosphate amidotransferase 2 (TAIR:AT4G34740.1)%3B Has 21476 Blast hits to 21464 proteins in 2887 species: Archae - 620%3B Bacteria - 12443%3B Metazoa - 408%3B Fungi - 374%3B Plants - 226%3B Viruses - 18%3B Other Eukaryotes - 7387 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT2G16510 ATPase, F0/V0 complex, subunit C protein ATPase%2C F0/V0 complex%2C subunit C protein%3B FUNCTIONS IN: ATPase activity%3B INVOLVED IN: ATP synthesis coupled proton transport%3B LOCATED IN: plasma membrane%2C vacuole%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: ATPase%2C F0/V0 complex%2C subunit C (InterPro:IPR002379)%2C ATPase%2C V0 complex%2C proteolipid subunit C%2C eukaryotic (InterPro:IPR011555)%2C ATPase%2C V0 complex%2C proteolipid subunit C (InterPro:IPR000245)%3B BEST Arabidopsis thaliana protein match is: vacuolar-type H(+)-ATPase C3 (TAIR:AT4G38920.1)%3B Has 2722 Blast hits to 2495 proteins in 678 species: Archae - 169%3B Bacteria - 703%3B Metazoa - 633%3B Fungi - 468%3B Plants - 344%3B Viruses - 0%3B Other Eukaryotes - 405 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaNung00665 Contig324 + View
Brassica carinata BcaB03g11815 ChrB03 + View
Brassica carinata BcaC01g00265 ChrC01 + View
Brassica napus A01p00120 A01 + View
Brassica napus A01p03780 A01 + View
Brassica napus C03p77420 C03 + View
Brassica napus C01p04060 C01 + View
Brassica oleracea BolC1t00397H C1 + View
Brassica rapa BraA08t34351Z A08 - View
Brassica rapa BraA01t00016Z A01 + View
Brassica rapa BraA01t00362Z A01 + View
Camellia sinensis var. sinensis CSS0047409 Ribosome-binding factor A family protein isoform 1 [Theobroma cacao] Chr6 + View
Camellia sinensis var. sinensis CSS0020119 PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit-like [Pyrus x bretschneideri] Chr9 + View
Camellia sinensis var. sinensis CSS0045438 amidophosphoribosyltransferase, putative [Ricinus communis] Chr3 + View
Corylus avellana Haze_02225 Similar to At4g34730: Probable ribosome-binding factor A, chloroplastic (Arabidopsis thaliana OX%3D3702) 1 + View
Coffea canephora Cc02_g16800 Probable ribosome-binding factor A, chloroplastic chr2 + View
Citrus clementina Ciclev10029417m.g scaffold_8 - View
Ceratophyllum demersum CDE05G2861 3 + View
Carpinus fangiana Cfa005117 Cfa02 - View
Carpinus fangiana Cfa006954 Cfa02 - View
Cardamine hirsuta CARHR106740 V-type proton ATPase 16 kDa proteolipid subunit c1/c3/c5 Chr3 - View
Carya illinoinensis CiPaw.06G127300 2.4.2.14 - Amidophosphoribosyltransferase / Phosphoribosyldiphosphate 5-amidotransferase Chr06 + View
Carya illinoinensis CiPaw.08G063300 PTHR10263//PTHR10263:SF19 - V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT // SUBFAMILY NOT NAMED Chr08 - View
Citrullus lanatus ClCG08G014470 V-type proton ATPase 16 kDa proteolipid subunit CG_Chr08 + View
Carica papaya Cpa.g.sc6.225 supercontig_6 - View
Carica papaya Cpa.g.sc150.2 supercontig_150 + View
Chenopodium quinoa AUR62016841 VMAC1: V-type proton ATPase 16 kDa proteolipid subunit C_Quinoa_Scaffold_3670 - View
Chenopodium quinoa AUR62010365 At4g34730: Probable ribosome-binding factor A, chloroplastic C_Quinoa_Scaffold_1257 + View
Capsella rubella Carub.0007s0555 2.4.2.14 - Amidophosphoribosyltransferase / Phosphoribosyldiphosphate 5-amidotransferase scaffold_7 + View
Capsella rubella Carub.0003s3030 K02155 - V-type H+-transporting ATPase 16kDa proteolipid subunit (ATPeV0C, ATP6L) scaffold_3 - View
Cucumis sativus L. CsaV3_2G015340 Amidophosphoribosyltransferase chr2 - View
Davidia involucrata Dinv23444 GWHABJS00000005 + View
Davidia involucrata Dinv39492 GWHABJS00000011 - View
Durio zibethinus Duzib132G1196 NW_019167915.1 + View
Erigeron canadensis ECA233G3828 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.I01331 Chr09 - View
Erythranthe guttata Migut.B00124 scaffold_2 - View
Eutrema salsugineum Thhalv10024812m.g 2.4.2.14 - Amidophosphoribosyltransferase / Phosphoribosyldiphosphate 5-amidotransferase scaffold_1 + View
Eutrema salsugineum Thhalv10026433m.g K02155 - V-type H+-transporting ATPase 16kDa proteolipid subunit (ATPeV0C, ATP6L) scaffold_1 + View
Fragaria x ananassa FAN23G1086 K02155 - V-type H+-transporting ATPase 16kDa proteolipid subunit (ATPeV0C, ATP6L) Fvb1-3 - View
Gossypium hirsutum Gohir.A02G169500 PTHR10263:SF14 - V-TYPE PROTON ATPASE 16 KDA PROTEOLIPID SUBUNIT C2 A02 - View
Gossypium hirsutum Gohir.A13G086800 PTHR33515:SF1 - RIBOSOME-BINDING FACTOR A, CHLOROPLASTIC-RELATED A13 + View
Gossypium hirsutum Gohir.A11G177100 K02155 - V-type H+-transporting ATPase 16kDa proteolipid subunit (ATPeV0C, ATP6L) A11 + View
Gossypium hirsutum Gohir.D03G010500 PTHR10263:SF14 - V-TYPE PROTON ATPASE 16 KDA PROTEOLIPID SUBUNIT C2 D03 + View
Gossypium hirsutum Gohir.A04G123500 PTHR10263:SF14 - V-TYPE PROTON ATPASE 16 KDA PROTEOLIPID SUBUNIT C2 A04 + View
Glycine max Glyma.02G050200 K02155 - V-type H+-transporting ATPase 16kDa proteolipid subunit (ATPeV0C, ATP6L) Gm02 + View
Glycine max Glyma.12G036200 2.4.2.14 - Amidophosphoribosyltransferase / Phosphoribosyldiphosphate 5-amidotransferase Gm12 + View
Glycine max Glyma.01G168000 PTHR10263//PTHR10263:SF12 - V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT // SUBFAMILY NOT NAMED Gm01 + View
Glycine max Glyma.11G110100 K02155 - V-type H+-transporting ATPase 16kDa proteolipid subunit (ATPeV0C, ATP6L) Gm11 - View
Gossypium raimondii Gorai.005G248800 Chr05 - View
Gossypium raimondii Gorai.007G196500 Chr07 + View
Gossypium raimondii Gorai.003G010900 Chr03 + View
Hydrangea macrophylla Hma1.2p1_0032F.1_g019990 Hma1.2p1_0032F.1 + View
Lupinus albus Lalb_Chr01g0002131 K02155 - V-type H+-transporting ATPase 16kDa proteolipid subunit (ATPeV0C, ATP6L) Lalb_Chr01 - View
Lotus japonicus Lj2g0012159 K02155 - V-type H+-transporting ATPase 16kDa proteolipid subunit (ATPeV0C, ATP6L) chr2 - View
Lotus japonicus Lj3g0001648 2.4.2.14 - Amidophosphoribosyltransferase / Phosphoribosyldiphosphate 5-amidotransferase chr3 + View
Lotus japonicus Lj1g0018801 K02155 - V-type H+-transporting ATPase 16kDa proteolipid subunit (ATPeV0C, ATP6L) chr1 - View
Lonicera japonica Lj4C216G6 GWHAAZE00000004 - View
Lonicera japonica Lj4A29T64 GWHAAZE00000004 + View
Lonicera japonica Lj9C383T13 GWHAAZE00000009 - View
Lonicera japonica Lj5A188T37 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_8_126900 K00764 - amidophosphoribosyltransferase (purF, PPAT) Lsat_1_v8_lg_8 + View
Malus domestica MD10G1061600 ribosome-binding factor A family protein Chr10 + View
Manihot esculenta Manes.04G082400 Chromosome04 + View
Manihot esculenta Manes.11G081500 Chromosome11 - View
Manihot esculenta Manes.01G144400 Chromosome01 - View
Medicago truncatula Medtr3g117590 GLN phosphoribosyl pyrophosphate amidotransferase chr3 - View
Medicago truncatula Medtr4g072050 vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 chr4 - View
Olea europaea Oeu020675.1 chr5 - View
Olea europaea Oeu060413.1 chr15 - View
Petunia axillaris Peaxi162Scf00362g01176 ribosome-binding factor A family protein Peaxi162Scf00362 + View
Petunia axillaris Peaxi162Scf00538g00127 V-type proton ATPase 16 kDa proteolipid subunit Peaxi162Scf00538 - View
Prunus persica Prupe.8G082300 K02834 - ribosome-binding factor A (rbfA) Pp08 + View
Papaver somniferum PSO210G2611 NC_039359.1 + View
Populus trichocarpa Potri.004G163400 PTHR10263//PTHR10263:SF13 - V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT // V-TYPE PROTON ATPASE 16 KDA PROTEOLIPID SUBUNIT C4 Chr04 - View
Phaseolus vulgaris Phvul.003G260400 K02155 - V-type H+-transporting ATPase 16kDa proteolipid subunit (ATPeV0C, ATP6L) Chr03 - View
Quercus lobata QL11p046524 11 - View
Rosa chinensis RcHm_v2.0_Chr2g0099681 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim05G0067600 chr05 + View
Salvia bowleyana SalBow6G6306 GWHASIU00000002 - View
Salvia bowleyana SalBow3G3567 GWHASIU00000006 - View
Salix brachista Sabra04G0109700 GWHAAZH00000004 - View
Simmondsia chinensis Sc14g0001920 GWHAASQ00000014 + View
Simmondsia chinensis Sc08g0000940 GWHAASQ00000008 - View
Simmondsia chinensis Sc18g0005410 GWHAASQ00000018 - View
Sapria himalayana SHI05633 scaffold8_16897533 + View
Solanum lycopersicum Solyc01g110520.3 Amidophosphoribosyltransferase (AHRD V3.3 *** A0A2G3BW41_CAPCH) SL4.0ch01 - View
Solanum pennellii Sopen10g024470 Vacuolar ATP synthase 16 kDa proteolipid subunit (EC 3.6.3.14) - Nicotiana tabacum (Common tobacco), vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p1) | AVA-P1 | FUNCTIONS IN: ATPase activity, proton-transporting ATPase activity, rotational mechanism | INVOLVED IN: proton transport, ATP synthesis coupled proton transport | LOCATED IN: vacuole | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: ATPase, F0/V0 complex, subunit C , ATPase, V0 complex, proteolipid subunit C, eukaryotic , ATPase, V0 complex, proteolipid subunit C | BEST Arabidopsis thaliana protein match is: vacuolar-type H(+)-ATPase C3 Spenn-ch10 - View
Solanum pennellii Sopen01g052650 Encodes glutamine 5-phosphoribosylpyrophosphate amidotransferase. Mutants are deficient in leaf, but not cotyledon, plastid and palisade cell development. Mutants exhibit defective chloroplast development under non-low light, suggesting that the defect in chloroplast development is caused by photo-oxidative damage. | GLN phosphoribosyl pyrophosphate amidotransferase 2 (ASE2) | FUNCTIONS IN: amidophosphoribosyltransferase activity | INVOLVED IN: purine base biosynthetic process, purine nucleotide biosynthetic process, leaf morphogenesis | LOCATED IN: plastid stroma, chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II , Phosphoribosyltransferase , Amidophosphoribosyl transferase , Glutamine amidotransferase, type II | BEST Arabidopsis thaliana protein match is: GLN phosphoribosyl pyrophosphate amidotransferase 1 Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400004422 V-type proton ATPase 16 kDa proteolipid subunit ST4.03ch10 - View
Solanum tuberosum PGSC0003DMG400001618 Amidophosphoribosyltransferase ST4.03ch01 - View
Selenicereus undatus Hund06286 Scaffold_33676 - View
Theobroma cacao Thecc.02G073100 Ribosome-binding factor A family protein Chromosome_2 + View
Tarenaya hassleriana THA.LOC104804109 V-type proton ATPase 16 kDa proteolipid subunit NW_010971389.1 + View
Tarenaya hassleriana THA.LOC104807773 V-type proton ATPase 16 kDa proteolipid subunit-like NW_010963495.1 - View
Tarenaya hassleriana THA.LOC104807288 probable ribosome-binding factor A%2C chloroplastic NW_010963495.1 + View
Tripterygium wilfordii TWI75G0372 NC_052253.1 + View
Tripterygium wilfordii TWI79G1598 NC_052238.1 + View
Vaccinium macrocarpon vmacro17411 Similar to ASE1: Amidophosphoribosyltransferase 1, chloroplastic (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro02046 Similar to At4g34730: Probable ribosome-binding factor A, chloroplastic (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1127G1720 CM024076.1 + View
Vigna mungo VMungo1309G0396 CM024072.1 - View
Vitis vinifera GSVIVG01024165001 chr3 - View