Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G4100 LG-5 - View
Acer truncatum Atru.chr4.1818 chr4 - View
Actinidia chinensis Actinidia39945 Lachesis_group17 + View
Arabidopsis lyrata AL4G28830 scaffold_4 - View
Arabidopsis lyrata AL3G39390 scaffold_3 - View
Avicennia marina MSTRG.4199 ScioBoG_102837_HRSCAF_103074 + View
Avicennia marina MSTRG.9839 ScioBoG_12795_HRSCAF_12848 - View
Amaranthus hybridus Ah.04g153380 AmaHy_arrow1_Scaffold_4 - View
Arabidopsis thaliana AT5G18820 TCP-1/cpn60 chaperonin family protein Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized%2C translocated%2C or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000)%2C AtCpn60alpha2 (At5g18820)%2C AtCpn60beta1 (At1g55490)%2C AtCpn60beta2 (At3g13470)%2C AtCpn60beta3 (At5g56500)%2C AtCpn60beta4 (At1g26230). embryo defective 3007 (EMB3007)%3B FUNCTIONS IN: ATP binding%3B INVOLVED IN: embryo development ending in seed dormancy%3B LOCATED IN: chloroplast%2C cytoplasm%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423)%2C Chaperonin Cpn60 (InterPro:IPR001844)%3B BEST Arabidopsis thaliana protein match is: chaperonin-60alpha (TAIR:AT2G28000.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT3G23990 heat shock protein 60 mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria. heat shock protein 60 (HSP60)%3B FUNCTIONS IN: copper ion binding%2C ATP binding%3B INVOLVED IN: response to cadmium ion%2C response to cyclopentenone%2C chaperone-mediated protein complex assembly%2C response to heat%2C mitochondrion organization%3B LOCATED IN: cytosol%2C cytosolic ribosome%2C mitochondrion%2C plasma membrane%2C mitochondrial matrix%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423)%2C Chaperonin Cpn60%2C conserved site (InterPro:IPR018370)%2C Chaperonin Cpn60 (InterPro:IPR001844)%3B BEST Arabidopsis thaliana protein match is: heat shock protein 60-2 (TAIR:AT2G33210.1)%3B Has 33706 Blast hits to 33652 proteins in 8680 species: Archae - 676%3B Bacteria - 21745%3B Metazoa - 1618%3B Fungi - 1515%3B Plants - 790%3B Viruses - 2%3B Other Eukaryotes - 7360 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT2G33210 heat shock protein 60-2 heat shock protein 60-2 (HSP60-2)%3B FUNCTIONS IN: copper ion binding%2C ATP binding%3B INVOLVED IN: inflammatory response%2C response to salt stress%3B LOCATED IN: mitochondrion%2C plasma membrane%2C chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Chaperonin Cpn60/TCP-1 (InterPro:IPR002423)%2C Chaperonin Cpn60%2C conserved site (InterPro:IPR018370)%2C Chaperonin Cpn60 (InterPro:IPR001844)%3B BEST Arabidopsis thaliana protein match is: heat shock protein 60 (TAIR:AT3G23990.1)%3B Has 33915 Blast hits to 33873 proteins in 8692 species: Archae - 707%3B Bacteria - 21782%3B Metazoa - 1680%3B Fungi - 1548%3B Plants - 807%3B Viruses - 2%3B Other Eukaryotes - 7389 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaB03g14598 ChrB03 + View
Brassica carinata BcaC01g03343 ChrC01 + View
Brassica napus C03p53460 C03 - View
Brassica napus A03p43500 A03 - View
Brassica oleracea BolC3t17607H C3 - View
Brassica rapa BraA03t13489Z A03 - View
Beta vulgaris EL10Ac3g06768 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED Chr3_EL10_PGA_scaffold7 + View
Camellia sinensis var. sinensis CSS0014381 heat shock protein 60, partial [Paeonia lactiflora] Chr9 + View
Cannabis sativa CANSAT78G1698 NC_044376.1 - View
Corylus avellana Haze_11536 Similar to CPN60-2: Chaperonin CPN60-2, mitochondrial (Cucurbita maxima OX%3D3661) 9 + View
Coffea canephora Cc03_g07040 Chaperonin CPN60-2, mitochondrial chr3 + View
Cardamine hirsuta CARHR127210 60 kDa chaperonin Chr4 - View
Carica papaya Cpa.g.sc59.67 supercontig_59 + View
Chenopodium quinoa AUR62035925 CPN60: Chaperonin CPN60, mitochondrial C_Quinoa_Scaffold_1700 + View
Capsella rubella Carub.0003s2453 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED scaffold_3 - View
Capsella rubella Carub.0004s1467 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED scaffold_4 - View
Davidia involucrata Dinv38296 GWHABJS00000016 + View
Durio zibethinus Duzib151G0241 NW_019167904.1 + View
Durio zibethinus Duzib212G0389 NW_019168026.1 + View
Erythranthe guttata Migut.G00606 scaffold_7 + View
Eutrema salsugineum Thhalv10016425m.g PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED scaffold_10 - View
Fragaria x ananassa FAN12G1740 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED Fvb4-3 + View
Fragaria vesca FvH4_4g05420 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED Fvb4 + View
Gossypium hirsutum Gohir.D09G195700 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED D09 + View
Gossypium hirsutum Gohir.A09G201800 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED A09 + View
Gossypium hirsutum Gohir.D11G141400 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED D11 + View
Glycine max Glyma.10G127800 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED Gm10 - View
Gossypium raimondii Gorai.006G219100 Chr06 + View
Gossypium raimondii Gorai.007G151700 Chr07 + View
Helianthus annuus HanXRQChr02g0059441 Probable chaperonin CPN60-2, mitochondrial HanXRQChr02 + View
Malus domestica MD13G1230800 heat shock protein 60 Chr13 - View
Manihot esculenta Manes.03G155000 Chromosome03 - View
Nelumbo nucifera Nn3g19860 chr3 + View
Olea europaea Oeu022323.1 scaffold199 + View
Prunus persica Prupe.1G056300 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED Pp01 + View
Populus trichocarpa Potri.001G054400 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED Chr01 - View
Phaseolus vulgaris Phvul.007G238500 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED Chr07 - View
Quercus lobata QL06p022681 6 + View
Rosa chinensis RcHm_v2.0_Chr4g0396571 RcHm_v2.0_Chr4 + View
Salvia bowleyana SalBow2G0241 GWHASIU00000007 - View
Salix brachista Sabra03G0127400 GWHAAZH00000003 + View
Schrenkiella parvula Sp4g15510 PTHR11353//PTHR11353:SF80 - CHAPERONIN // SUBFAMILY NOT NAMED ch4-6 - View
Solanum tuberosum PGSC0003DMG401027165 Chaperonin-60kD, ch60 ST4.03ch05 + View
Trochodendron aralioides TAR636G1961 group1 - View
Tripterygium wilfordii TWI09G1178 NC_052245.1 - View
Vaccinium macrocarpon vmacro15496 Similar to CPN60-2: Chaperonin CPN60-2, mitochondrial (Cucurbita maxima OX%3D3661) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro02731 Similar to CPN60-2: Chaperonin CPN60-2, mitochondrial (Cucurbita maxima OX%3D3661) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0720G1756 CM024071.1 - View
Vitis vinifera GSVIVG01029025001 chr5 + View