Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold111G31513 scaffold111 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G15350 LG-6 + View
Avicennia marina MSTRG.2570 ScioBoG_102835_HRSCAF_103059 - View
Aquilegia oxysepala Aqoxy6G00781 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.R84QR1 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) arahy.Tifrunner.gnm1.Arahy.10 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.K6TCUJ K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) arahy.Tifrunner.gnm1.Arahy.03 + View
Arabidopsis thaliana AT4G39910 ubiquitin-specific protease 3 Encodes a nuclear ubiquitin-specific protease. ubiquitin-specific protease 3 (UBP3)%3B CONTAINS InterPro DOMAIN/s: Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2%2C conserved site (InterPro:IPR018200)%2C Peptidase C19%2C ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 (TAIR:AT2G22310.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 - View
Brassica napus C01p00920 C01 - View
Brassica napus A01p00810 A01 - View
Brassica rapa BraA01t00083Z A01 - View
Brassica rapa BraA08t34280Z A08 + View
Beta vulgaris EL10Ac6g15114 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Chr6_EL10_PGA_scaffold0 - View
Cicer arietinum L. Ca_17741_v3 Ca_LG6_v3 - View
Coffea canephora Cc07_g15110 Ubiquitin carboxyl-terminal hydrolase 3 chr7 + View
Citrus clementina Ciclev10025895m.g scaffold_7 - View
Ceratophyllum demersum CDE10G0650 8 + View
Carpinus fangiana Cfa002652 Cfa01 + View
Cardamine hirsuta CARHR246780 Ubiquitin carboxyl-terminal hydrolase Chr7 + View
Carya illinoinensis CiPaw.03G142600 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Chr03 - View
Carya illinoinensis CiPaw.04G100400 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Chr04 - View
Chenopodium quinoa AUR62003801 UBP3: Ubiquitin carboxyl-terminal hydrolase 3 C_Quinoa_Scaffold_2370 - View
Daucus carota DCAR_014216 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv13194 GWHABJS00000014 + View
Davidia involucrata Dinv21897 GWHABJS00000021 + View
Durio zibethinus Duzib147G1491 NW_019168470.1 - View
Durio zibethinus Duzib187G0270 NW_019167860.1 - View
Eucalyptus grandis Eucgr.I00440 Chr09 - View
Erythranthe guttata Migut.H02354 scaffold_8 + View
Eutrema salsugineum Thhalv10025506m.g K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) scaffold_1 - View
Fragaria x ananassa FAN26G1771 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Fvb1-2 + View
Fragaria x ananassa FAN19G1805 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Fvb1-4 + View
Fragaria x ananassa FAN28G0114 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Fvb1-1 - View
Fragaria x ananassa FAN23G1972 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Fvb1-3 + View
Fragaria vesca FvH4_1g20720 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Fvb1 + View
Gossypium hirsutum Gohir.A11G202200 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) A11 - View
Gossypium hirsutum Gohir.D11G222150 KOG1871//KOG1873 - Ubiquitin-specific protease // Ubiquitin-specific protease D11 + View
Glycine max Glyma.18G016800 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Gm18 + View
Glycine max Glyma.05G178100 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Gm05 + View
Glycine max Glyma.08G135100 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Gm08 + View
Gossypium raimondii Gorai.007G237200 Chr07 + View
Gossypium raimondii Gorai.003G039300 Chr03 - View
Lupinus albus Lalb_Chr12g0203871 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Lalb_Chr12 - View
Lotus japonicus Lj4g0022735 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) chr4 - View
Lotus japonicus Lj6g0008846 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) chr6 + View
Lonicera japonica Lj2A547G21 GWHAAZE00000002 + View
Magnolia biondii MBI05_g37051_MAGBIO AED:0.19 Chr05 - View
Malus domestica MD01G1031200 ubiquitin-specific protease 3 Chr01 - View
Manihot esculenta Manes.13G075650 Chromosome13 - View
Manihot esculenta Manes.12G134200 Chromosome12 + View
Medicago truncatula Medtr8g090190 ubiquitin carboxyl-terminal hydrolase chr8 + View
Medicago truncatula Medtr3g087140 ubiquitin carboxyl-terminal hydrolase chr3 + View
Papaver somniferum PSO447G0281 NW_020621936.1 + View
Populus trichocarpa Potri.005G074900 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Chr05 + View
Populus trichocarpa Potri.007G093600 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Chr07 - View
Phaseolus vulgaris Phvul.002G256600 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) Chr02 - View
Rosa chinensis RcHm_v2.0_Chr2g0113231 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0010900 chr08 - View
Salix brachista Sabra05G0061600 GWHAAZH00000005 + View
Salix brachista Sabra07G0077500 GWHAAZH00000007 - View
Simmondsia chinensis Sc03g0002060 GWHAASQ00000003 + View
Sechium edule Sed0005416 LG13 + View
Schrenkiella parvula Sp7g35980 K11842 - ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12] (USP12_46) ch7-6 + View
Selenicereus undatus Hund13621 Scaffold_33679 + View
Trochodendron aralioides TAR376G0991 group14 - View
Trochodendron aralioides TAR625G1185 group4 - View
Theobroma cacao Thecc.01G100900 Ubiquitin-specific protease 3 Chromosome_1 + View
Tarenaya hassleriana THA.LOC104807863 ubiquitin carboxyl-terminal hydrolase 3 isoform X1 NW_010963495.1 + View
Tripterygium wilfordii TWI74G0008 NC_052234.1 + View
Tripterygium wilfordii TWI53G0010 NC_052244.1 - View
Vaccinium macrocarpon vmacro18597 Similar to UBP4: Ubiquitin carboxyl-terminal hydrolase 4 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G2957 CM024069.1 + View
Vigna mungo VMungo1383G3464 CM024070.1 - View