Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold153G36926 scaffold153 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G26550 LG-1 - View
Acer truncatum Atru.chr5.188 chr5 - View
Actinidia chinensis Actinidia12167 Lachesis_group0 + View
Arabidopsis lyrata AL4G44060 scaffold_4 - View
Avicennia marina MSTRG.17144 ScioBoG_19743_HRSCAF_19834 - View
Amaranthus hybridus Ah.05g173400 E3 ubiquitin-protein ligase BRE1-like 1 (AtBRE1) (EC 2.3.2.27) (Protein HISTONE MONOUBIQUITINATION 1) (AtHUB1) (Protein REDUCED DORMANCY 4) (RING-type E3 ubiquitin transferase BRE1-like 1) AmaHy_arrow1_Scaffold_5 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VCI4LX PTHR31934:SF4 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN arahy.Tifrunner.gnm1.Arahy.02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.60BY7S PTHR31934:SF4 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN arahy.Tifrunner.gnm1.Arahy.12 - View
Arabidopsis thaliana AT2G44950 histone mono-ubiquitination 1 The gene encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B. histone mono-ubiquitination 1 (HUB1)%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C protein homodimerization activity%2C zinc ion binding%3B INVOLVED IN: in 10 processes%3B LOCATED IN: mitochondrion%2C nucleus%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: histone mono-ubiquitination 2 (TAIR:AT1G55250.1)%3B Has 39567 Blast hits to 24086 proteins in 1905 species: Archae - 719%3B Bacteria - 4806%3B Metazoa - 20260%3B Fungi - 3821%3B Plants - 2415%3B Viruses - 125%3B Other Eukaryotes - 7421 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaB06g29409 ChrB06 - View
Brassica carinata BcaC02g12257 ChrC02 + View
Brassica carinata BcaC02g07125 ChrC02 - View
Brassica napus C04p71340 C04 - View
Brassica napus A04p33570 A04 - View
Brassica napus C04p05920 C04 - View
Brassica oleracea BolC4t28638H C4 - View
Brassica oleracea BolC4t22223H C4 - View
Brassica rapa BraA04t18819Z A04 - View
Beta vulgaris EL10Ac1g00804 PTHR23163//PTHR23163:SF3 - RING FINGER PROTEIN-RELATED // E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 Chr1_EL10_PGA_scaffold3 - View
Capsicum annuum CAN.G899.31 PGAv.1.6.scaffold899 + View
Corylus avellana Haze_02750 Protein of unknown function 1 + View
Coffea canephora Cc02_g24790 alpha/beta-Hydrolases superfamily protein chr2 + View
Citrus clementina Ciclev10019862m.g scaffold_3 + View
Ceratophyllum demersum CDE11G1177 9 - View
Carpinus fangiana Cfa011114 Cfa04 - View
Cardamine hirsuta CARHR140190 E3 ubiquitin-protein ligase BRE1-like protein Chr4 - View
Carya illinoinensis CiPaw.13G029600 K10696 - E3 ubiquitin-protein ligase BRE1 [EC:6.3.2.19] (BRE1) Chr13 - View
Carya illinoinensis CiPaw.14G023600 K10696 - E3 ubiquitin-protein ligase BRE1 [EC:6.3.2.19] (BRE1) Chr14 - View
Citrullus lanatus ClCG05G000330 E3 ubiquitin-protein ligase BRE1-like protein CG_Chr05 + View
Cucumis melo MELO3C005969.2 Alpha/beta-Hydrolases superfamily protein chr06 + View
Carica papaya Cpa.g.sc101.40 supercontig_101 - View
Chenopodium quinoa AUR62004133 HUB1: E3 ubiquitin-protein ligase BRE1-like 1 C_Quinoa_Scaffold_4250 - View
Chenopodium quinoa AUR62013696 HUB1: E3 ubiquitin-protein ligase BRE1-like 1 C_Quinoa_Scaffold_1412 - View
Capsella rubella Carub.0004s2756 PTHR23163//PTHR23163:SF3 - RING FINGER PROTEIN-RELATED // E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 scaffold_4 - View
Cucumis sativus L. CsaV3_3G007470 alpha/beta-Hydrolases superfamily protein chr3 + View
Durio zibethinus Duzib138G0437 NW_019167893.1 - View
Durio zibethinus Duzib268G0302 NW_019168270.1 + View
Durio zibethinus Duzib133G0682 NW_019167938.1 - View
Erigeron canadensis ECA234G2180 Conyza_canadensis_scaffold:4 - View
Erythranthe guttata Migut.B01559 scaffold_2 - View
Eutrema salsugineum Thhalv10001306m.g PTHR23163:SF3 - E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 scaffold_22 - View
Fragaria x ananassa FAN01G0771 PTHR23163//PTHR23163:SF3 - RING FINGER PROTEIN-RELATED // E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 Fvb7-4 - View
Fragaria x ananassa FAN06G2759 PTHR31934//PTHR31934:SF4 - FAMILY NOT NAMED // ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Fvb7-2 + View
Gossypium hirsutum Gohir.A08G137833 PTHR23163//PTHR23163:SF3 - RING FINGER PROTEIN-RELATED // E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 A08 + View
Gossypium hirsutum Gohir.D11G081450 PTHR31934:SF4 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN D11 - View
Gossypium hirsutum Gohir.A08G029900 K10696 - E3 ubiquitin-protein ligase BRE1 [EC:6.3.2.19] (BRE1) A08 - View
Gossypium hirsutum Gohir.D08G159100 PTHR23163//PTHR23163:SF3 - RING FINGER PROTEIN-RELATED // E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 D08 + View
Gossypium hirsutum Gohir.A11G077100 K10696 - E3 ubiquitin-protein ligase BRE1 [EC:6.3.2.19] (BRE1) A11 - View
Glycine max Glyma.01G074000 PTHR23163//PTHR23163:SF3 - RING FINGER PROTEIN-RELATED // E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 Gm01 - View
Glycine max Glyma.07G109900 PTHR31934:SF4 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Gm07 + View
Glycine max Glyma.03G116900 PTHR31934:SF4 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Gm03 - View
Gossypium raimondii Gorai.004G165100 Chr04 + View
Gossypium raimondii Gorai.004G039600 Chr04 - View
Gossypium raimondii Gorai.007G087200 Chr07 - View
Hydrangea macrophylla Hma1.2p1_0341F.1_g130550 Hma1.2p1_0341F.1 + View
Lupinus albus Lalb_Chr03g0040151 K10696 - E3 ubiquitin-protein ligase BRE1 [EC:6.3.2.19] (BRE1) Lalb_Chr03 + View
Lupinus albus Lalb_Chr19g0126661 K10696 - E3 ubiquitin-protein ligase BRE1 [EC:6.3.2.19] (BRE1) Lalb_Chr19 - View
Lotus japonicus Lj3g0026230 PTHR31934//PTHR31934:SF4 - FAMILY NOT NAMED // ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN chr3 - View
Lonicera japonica Lj9A560G41 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_4_43721 Lsat_1_v8_lg_4 + View
Magnolia biondii MBI04_g09531_MAGBIO AED:0.11 Chr04 - View
Malus domestica MD02G1218200 histone mono-ubiquitination 1 Chr02 - View
Malus domestica MD07G1098600 alpha/beta-Hydrolases superfamily protein Chr07 + View
Manihot esculenta Manes.05G051800 Chromosome05 + View
Manihot esculenta Manes.01G271200 Chromosome01 + View
Nelumbo nucifera Nn1g00928 chr1 - View
Olea europaea Oeu063219.1 chr3 + View
Olea europaea Oeu000047.1 chr15 - View
Oryza sativa ssp. japonica Os04g0550400 E3 ligases of H2Bub1, Transcriptional regulation of anther development chr04 - View
Petunia axillaris Peaxi162Scf00377g00828 alpha/beta-Hydrolases superfamily protein Peaxi162Scf00377 + View
Petunia axillaris Peaxi162Scf00001g05810 alpha/beta-Hydrolases superfamily protein Peaxi162Scf00001 + View
Punica granatum PGR004G1996 NC_045131.1 - View
Papaver somniferum PSO782G1681 NC_039365.1 + View
Papaver somniferum PSO063G7067 NC_039364.1 - View
Populus trichocarpa Potri.002G141300 K10696 - E3 ubiquitin-protein ligase BRE1 [EC:6.3.2.19] (BRE1) Chr02 - View
Phaseolus vulgaris Phvul.010G054100 PTHR31934:SF4 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Chr10 - View
Rhododendron simsii Rhsim07G0033300 chr07 + View
Salvia bowleyana SalBow5G0694 GWHASIU00000003 + View
Salix brachista Sabra14G0041000 GWHAAZH00000014 - View
Salix brachista Sabra02G0110200 GWHAAZH00000002 - View
Simmondsia chinensis Sc02g0002930 GWHAASQ00000002 + View
Sechium edule Sed0005356 LG12 + View
Sapria himalayana SHI13592 scaffold16_12220143 + View
Solanum lycopersicum Solyc01g090590.3 Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A2U1P0W9_ARTAN) SL4.0ch01 - View
Schrenkiella parvula Sp4g27030 PTHR23163//PTHR23163:SF3 - RING FINGER PROTEIN-RELATED // E3 UBIQUITIN-PROTEIN LIGASE BRE1-LIKE 1 ch4-6 - View
Solanum pennellii Sopen01g036340 alpha/beta-Hydrolases superfamily protein | FUNCTIONS IN: hydrolase activity, acting on ester bonds | INVOLVED IN: intracellular protein transport, GPI anchor metabolic process | LOCATED IN: intrinsic to endoplasmic reticulum membrane | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: PGAP1-like Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG400025982 Conserved gene of unknown function ST4.03ch01 - View
Selenicereus undatus Hund27392 Scaffold_2055 + View
Selenicereus undatus Hund17071 Scaffold_33675 + View
Trochodendron aralioides TAR374G1704 group12 - View
Theobroma cacao Thecc.01G387900 Alpha/beta-Hydrolases superfamily protein Chromosome_1 + View
Tripterygium wilfordii TWI59G0329 NC_052248.1 - View
Tripterygium wilfordii TWI23G0115 NC_052239.1 - View
Vaccinium macrocarpon vmacro13472 Similar to PKSA: Type III polyketide synthase A (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0331G0080 CM024078.1 - View
Vitis vinifera GSVIVG01018223001 chr15 - View