Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold153G36967 scaffold153 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr9.1305 chr9 - View
Actinidia chinensis Actinidia09237 Lachesis_group13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.ENF8M2 PTHR31451:SF17 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 6 arahy.Tifrunner.gnm1.Arahy.02 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.T3D6CG PTHR31451:SF17 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 6 arahy.Tifrunner.gnm1.Arahy.12 - View
Arabidopsis thaliana AT5G39350 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: shoot apex%2C embryo%2C sperm cell%2C flower%2C seed%3B EXPRESSED DURING: F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1)%3B Has 45149 Blast hits to 14161 proteins in 247 species: Archae - 1%3B Bacteria - 11%3B Metazoa - 167%3B Fungi - 118%3B Plants - 44194%3B Viruses - 0%3B Other Eukaryotes - 658 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT3G29230 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1)%3B Has 41738 Blast hits to 14344 proteins in 280 species: Archae - 0%3B Bacteria - 4%3B Metazoa - 166%3B Fungi - 161%3B Plants - 40664%3B Viruses - 0%3B Other Eukaryotes - 743 (source: NCBI BLink). Chr3 + View
Amborella trichopoda ATR0064G117 AmTr_v1.0_scaffold00110 + View
Brassica napus A05p05380 A05 - View
Brassica oleracea BolC7t44334H C7 + View
Brassica rapa BraA02t06984Z A02 - View
Camellia sinensis var. sinensis CSS0040788 PREDICTED: pentatricopeptide repeat-containing protein At2g34400 [Vitis vinifera] Chr3 + View
Camellia sinensis var. sinensis CSS0016296 PREDICTED: putative pentatricopeptide repeat-containing protein At5g47460 [Vitis vinifera] Chr12 - View
Corylus avellana Haze_02726 Similar to PCMP-H24: Pentatricopeptide repeat-containing protein At4g02750 (Arabidopsis thaliana OX%3D3702) 1 - View
Corylus avellana Haze_07710 Similar to PCMP-E32: Putative pentatricopeptide repeat-containing protein At5g08490 (Arabidopsis thaliana OX%3D3702) 4 + View
Corylus avellana Haze_11935 Similar to PCMP-E66: Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial (Arabidopsis thaliana OX%3D3702) 9 + View
Citrus clementina Ciclev10019350m.g scaffold_3 - View
Carpinus fangiana Cfa011135 Cfa04 + View
Cardamine hirsuta CARHR263040 Pentatricopeptide repeat-containing protein Chr8 - View
Carya illinoinensis CiPaw.03G090800 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr03 + View
Carya illinoinensis CiPaw.04G058000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr04 + View
Chenopodium quinoa AUR62019951 PCMP-E103: Putative pentatricopeptide repeat-containing protein At5g47460 C_Quinoa_Scaffold_1480 + View
Chenopodium quinoa AUR62021581 PCMP-H43: Pentatricopeptide repeat-containing protein At3g12770 C_Quinoa_Scaffold_1675 + View
Davidia involucrata Dinv39141 GWHABJS00000003 - View
Davidia involucrata Dinv16704 GWHABJS00000018 + View
Durio zibethinus Duzib268G0831 NW_019168270.1 + View
Erythranthe guttata Migut.H00645 scaffold_8 + View
Fragaria x ananassa FAN07G1055 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb4-4 + View
Fragaria x ananassa FAN06G1508 PF00067//PF00466//PF01535//PF13041//PF13812//PF14432 - Cytochrome P450 (p450) // Ribosomal protein L10 (Ribosomal_L10) // PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb7-2 + View
Fragaria x ananassa FAN02G4587 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-4 + View
Fragaria vesca FvH4_6g47350 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6 + View
Glycine max Glyma.11G033300 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Gm11 + View
Lonicera japonica Lju41C5T15 GWHAAZE00000094 + View
Lonicera japonica Lj8P263T13 GWHAAZE00000008 + View
Lonicera japonica Lj8C40T4 GWHAAZE00000008 + View
Malus domestica MD07G1098200 Pentatricopeptide repeat (PPR-like) superfamily protein Chr07 + View
Manihot esculenta Manes.02G040100 Chromosome02 + View
Manihot esculenta Manes.01G098300 Chromosome01 + View
Nelumbo nucifera Nn3g17385 chr3 + View
Oryza sativa ssp. japonica Os10g0558600 Pentatricopeptide repeat domain containing protein. chr10 + View
Punica granatum PGR004G1562 NC_045131.1 + View
Punica granatum PGR042G3438 NC_045130.1 - View
Prunus persica Prupe.3G258100 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Pp03 + View
Populus trichocarpa Potri.017G091600 PF01535//PF13041//PF13812//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr17 - View
Phaseolus vulgaris Phvul.010G058300 Chr10 - View
Rosa chinensis RcHm_v2.0_Chr2g0166381 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim10G0044500 chr10 + View
Salvia bowleyana SalBow5G2945 GWHASIU00000003 + View
Salix brachista Sabra17G0080600 GWHAAZH00000017 - View
Sechium edule Sed0019771 LG09 + View
Solanum pennellii Sopen05g007460 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch05 + View
Solanum pennellii Sopen08g027050 Pentatricopeptide repeat (PPR) superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch08 - View
Solanum tuberosum PGSC0003DMG400001446 Pentatricopeptide repeat-containing protein ST4.03ch02 + View
Trochodendron aralioides TAR374G0238 group12 - View
Trochodendron aralioides TAR629G2803 group0 - View
Trochodendron aralioides TAR622G0749 group8 + View
Theobroma cacao Thecc.02G335100 Pentatricopeptide repeat-containing protein Chromosome_2 - View
Theobroma cacao Thecc.03G250300 Pentatricopeptide repeat superfamily protein Chromosome_3 - View
Tarenaya hassleriana THA.LOC104814478 pentatricopeptide repeat-containing protein At4g16470 isoform X1 NW_010965451.1 + View
Vaccinium macrocarpon vmacro00208 Similar to CID7: Polyadenylate-binding protein-interacting protein 7 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View