Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold52G19047 scaffold52 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G3690 LG-2 - View
Aethionema arabicum Aa31LG11G2460 LG-11 - View
Aethionema arabicum Aa31LG5G12880 LG-5 + View
Aethionema arabicum Aa31LG11G13750 LG-11 - View
Acer truncatum Atru.chr9.637 chr9 + View
Actinidia chinensis Actinidia35055 Lachesis_group2 + View
Actinidia chinensis Actinidia18969 Lachesis_group9 + View
Arabidopsis lyrata AL5G20360 scaffold_5 + View
Arabidopsis lyrata AL3G11640 scaffold_3 + View
Arabidopsis lyrata AL6G26690 scaffold_6 + View
Avicennia marina MSTRG.15429 ScioBoG_19538_HRSCAF_19626 - View
Avicennia marina MSTRG.23850 ScioBoG_3895_HRSCAF_3912 - View
Avicennia marina MSTRG.3381 ScioBoG_102836_HRSCAF_103072 + View
Amaranthus hybridus Ah.11g047330 AmaHy_arrow1_Scaffold_11 - View
Amaranthus hybridus Ah.16g100820 AmaHy_arrow1_Scaffold_16 - View
Amaranthus hybridus Ah.10g038380 AmaHy_arrow1_Scaffold_10 + View
Aquilegia oxysepala Aqoxy3G00577 CHR03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q3JRQN PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.11 + View
Arabidopsis thaliana AT5G15820 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G02340.1)%3B Has 8420 Blast hits to 8405 proteins in 260 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 2461%3B Fungi - 626%3B Plants - 4186%3B Viruses - 29%3B Other Eukaryotes - 1112 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT3G02340 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G15820.1)%3B Has 9104 Blast hits to 9081 proteins in 277 species: Archae - 2%3B Bacteria - 2%3B Metazoa - 2595%3B Fungi - 690%3B Plants - 4590%3B Viruses - 42%3B Other Eukaryotes - 1183 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC06g30844 ChrC06 - View
Brassica carinata BcaC09g47694 ChrC09 + View
Brassica carinata BcaB04g19529 ChrB04 + View
Brassica carinata BcaC06g33724 ChrC06 + View
Brassica napus A02p03240 A02 + View
Brassica napus C02p07980 C02 + View
Brassica napus C09p61250 C09 - View
Brassica napus C07p38600 C07 + View
Brassica oleracea BolC7t44381H C7 + View
Brassica oleracea BolC9t58967H C9 - View
Brassica oleracea BolC7t44979H C7 + View
Brassica oleracea BolC1t05911H C1 - View
Brassica oleracea BolC2t06721H C2 + View
Brassica rapa BraA09t36058Z A09 + View
Brassica rapa BraA02t05295Z A02 + View
Beta vulgaris EL10Ac5g11199 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr5_EL10_PGA_scaffold2 + View
Camellia sinensis var. sinensis CSS0041798 PREDICTED: E3 ubiquitin-protein ligase Praja-2-like [Solanum tuberosum] Chr2 + View
Cannabis sativa CANSAT64G2885 NC_044379.1 - View
Cicer arietinum L. Ca_21748_v3 Ca_LG7_v3 - View
Corylus avellana Haze_14353 Similar to CIP8: E3 ubiquitin-protein ligase CIP8 (Arabidopsis thaliana OX%3D3702) 5 - View
Coffea canephora Cc07_g04700 Putative uncharacterized protein chr7 + View
Carpinus fangiana Cfa007721 Cfa03 + View
Cardamine hirsuta CARHR076320 RING/U-box superfamily protein Chr3 + View
Cardamine hirsuta CARHR197500 RING/U-box superfamily protein Chr6 - View
Carya illinoinensis CiPaw.04G050800 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr04 - View
Carya illinoinensis CiPaw.03G080700 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr03 - View
Citrullus lanatus ClCG11G005060 RING/U-box superfamily protein LENGTH=348 CG_Chr11 + View
Cucumis melo MELO3C022061.2 E3 ubiquitin-protein ligase RING1-like chr09 - View
Chenopodium quinoa AUR62023130 RING1: E3 ubiquitin-protein ligase RING1 C_Quinoa_Scaffold_1189 - View
Chenopodium quinoa AUR62009446 CIP8: E3 ubiquitin-protein ligase CIP8 C_Quinoa_Scaffold_3674 - View
Capsella rubella Carub.0006s1398 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_6 + View
Capsella rubella Carub.0005s0864 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_5 + View
Capsella rubella Carub.0003s0145 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_3 + View
Cucumis sativus L. CsaV3_5G038810 E3 ubiquitin-protein ligase RING1-like chr5 + View
Daucus carota DCAR_010188 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv34889 GWHABJS00000012 - View
Durio zibethinus Duzib084G0164 NW_019167827.1 + View
Durio zibethinus Duzib068G1366 NW_019167838.1 + View
Erigeron canadensis ECA246G2794 Conyza_canadensis_scaffold:8 - View
Erigeron canadensis ECA246G0113 Conyza_canadensis_scaffold:8 + View
Eucalyptus grandis Eucgr.I02088 Chr09 + View
Eucalyptus grandis Eucgr.B00656 Chr02 + View
Eucalyptus grandis Eucgr.J01430 Chr10 + View
Erythranthe guttata Migut.H00571 scaffold_8 - View
Eutrema salsugineum Thhalv10013685m.g PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_2 + View
Eutrema salsugineum Thhalv10020821m.g PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED scaffold_13 - View
Fragaria x ananassa FAN18G2262 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb5-1 - View
Fragaria x ananassa FAN13G1552 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb5-2 - View
Fragaria x ananassa FAN09G2243 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb6-2 + View
Fragaria x ananassa FAN02G2851 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb6-4 - View
Fragaria vesca FvH4_5g13270 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb5 - View
Fragaria vesca FvH4_6g46010 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Fvb6 - View
Gossypium hirsutum Gohir.D03G099200 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED D03 + View
Gossypium hirsutum Gohir.A03G072600 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED A03 + View
Glycine max Glyma.05G017500 PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Gm05 - View
Glycine max Glyma.17G082500 PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Gm17 + View
Glycine max Glyma.13G050800 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm13 - View
Glycine max Glyma.19G037800 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Gm19 + View
Gossypium raimondii Gorai.003G104200 Chr03 + View
Helianthus annuus HanXRQChr15g0472821 Putative zinc finger, RING/FYVE/PHD-type HanXRQChr15 + View
Lupinus albus Lalb_Chr13g0302641 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr13 - View
Lupinus albus Lalb_Chr02g0158631 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr02 - View
Lotus japonicus Lj4g0010494 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED chr4 - View
Lotus japonicus Lj2g0011623 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED chr2 - View
Lonicera japonica Lj4P127T28 GWHAAZE00000004 + View
Lonicera japonica Lju361C12T0 GWHAAZE00000081 + View
Lactuca sativa Lsat_1_v5_gn_3_95340 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Lsat_1_v8_lg_3 - View
Lactuca sativa Lsat_1_v5_gn_1_15520 PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Lsat_1_v8_lg_1 + View
Magnolia biondii MBI15_g24993_MAGBIO AED:0.03 Chr15 - View
Malus domestica MD17G1068100 RING/U-box superfamily protein Chr17 + View
Malus domestica MD06G1206700 RING/U-box superfamily protein Chr06 + View
Malus domestica MD09G1078100 RING/U-box superfamily protein Chr09 + View
Manihot esculenta Manes.06G079900 Chromosome06 - View
Manihot esculenta Manes.14G090100 Chromosome14 + View
Manihot esculenta Manes.01G105300 Chromosome01 + View
Manihot esculenta Manes.02G061800 Chromosome02 + View
Medicago truncatula Medtr4g110100 zinc finger, C3HC4 type (RING finger) protein chr4 + View
Nelumbo nucifera Nn3g17587 chr3 + View
Olea europaea Oeu062194.1 chr10 + View
Olea europaea Oeu033424.2 chr2 - View
Olea europaea Oeu032846.1 chr18 + View
Punica granatum PGR004G1097 NC_045131.1 - View
Punica granatum PGR044G2376 NC_045134.1 - View
Prunus persica Prupe.3G246300 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Pp03 - View
Prunus persica Prupe.5G211100 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Pp05 + View
Pisum sativum Psat1g064000 Ring finger domain chr1LG6 + View
Papaver somniferum PSO478G0192 NC_039361.1 - View
Populus trichocarpa Potri.017G102800 PF13639 - Ring finger domain (zf-RING_2) Chr17 + View
Phaseolus vulgaris Phvul.003G181600 PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Chr03 - View
Phaseolus vulgaris Phvul.004G045600 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED Chr04 + View
Rosa chinensis RcHm_v2.0_Chr2g0164241 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim08G0078800 chr08 + View
Salix brachista Sabra04G0072700 GWHAAZH00000004 + View
Sechium edule Sed0016208 LG03 + View
Sechium edule Sed0014849 LG11 + View
Solanum lycopersicum Solyc02g089410.3 RING/U-box superfamily protein (AHRD V3.3 *-* Q8GYG0_ARATH) SL4.0ch02 + View
Solanum lycopersicum Solyc02g065650.1 RING/U-box superfamily protein (AHRD V3.3 *-* Q8GYG0_ARATH) SL4.0ch02 - View
Solanum lycopersicum Solyc03g114680.3 RING/U-box superfamily protein (AHRD V3.3 *-* Q8GYG0_ARATH) SL4.0ch03 - View
Schrenkiella parvula Sp6g28290 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED ch6-6 - View
Schrenkiella parvula Sp2g24140 PTHR22763//PTHR22763:SF88 - RING ZINC FINGER PROTEIN // RING/U-BOX DOMAIN-CONTAINING PROTEIN ch2-4 + View
Schrenkiella parvula Sp3g01400 PTHR22763//PTHR22763:SF8 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED ch3-1 + View
Schrenkiella parvula Sp1g12540 PTHR22763//PTHR22763:SF77 - RING ZINC FINGER PROTEIN // SUBFAMILY NOT NAMED ch1-1 - View
Solanum pennellii Sopen03g033750 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch03 - View
Solanum pennellii Sopen02g034170 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch02 + View
Solanum pennellii Sopen02g015860 RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400024614 Zinc finger protein ST4.03ch03 - View
Solanum tuberosum PGSC0003DMG400001386 Zinc finger protein ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400026558 Zinc finger protein ST4.03ch02 - View
Trochodendron aralioides TAR629G0615 group0 - View
Trochodendron aralioides TAR374G0167 group12 + View
Theobroma cacao Thecc.04G111200 Uncharacterized protein Chromosome_4 + View
Tarenaya hassleriana THA.LOC104800993 E3 ubiquitin-protein ligase Praja-2 NW_010960188.1 - View
Tarenaya hassleriana THA.LOC104820973 E3 ubiquitin-protein ligase Praja-1 NW_010966372.1 - View
Tarenaya hassleriana THA.LOC104827145 LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase Praja-1 NW_010967707.1 + View
Trifolium pratense TPR.G15945 Tp57577_TGAC_v2_LG3 + View
Trifolium pratense TPR.G1991 Tp57577_TGAC_v2_LG5 - View
Tripterygium wilfordii TWI81G0924 NC_052251.1 + View
Tripterygium wilfordii TWI34G1377 NC_052235.1 - View
Vaccinium macrocarpon vmacro16470 Similar to RING1: E3 ubiquitin-protein ligase RING1 (Gossypium hirsutum OX%3D3635) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0464G1815 CM024077.1 + View
Vigna mungo VMungo1215G0832 CM024074.1 + View