Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold173G39170 scaffold173 - View
SGA_v2.0_scaffold144G35936 scaffold144 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G15530 LG-10 - View
Aethionema arabicum Aa31LG1G10990 LG-1 - View
Aethionema arabicum Aa31LG1G27370 LG-1 + View
Acer truncatum Atru.chr5.505 chr5 + View
Acer truncatum Atru.chr9.2173 chr9 - View
Actinidia chinensis Actinidia01997 Lachesis_group23 - View
Actinidia chinensis Actinidia14569 Lachesis_group6 - View
Arabidopsis lyrata AL1G10760 scaffold_1 + View
Arabidopsis lyrata AL4G45180 scaffold_4 + View
Arabidopsis lyrata AL5G43730 scaffold_5 + View
Arabidopsis lyrata AL6G53040 scaffold_6 + View
Avicennia marina MSTRG.17274 ScioBoG_19743_HRSCAF_19834 + View
Avicennia marina MSTRG.25619 ScioBoG_4119_HRSCAF_4138 + View
Amaranthus hybridus Ah.05g180540 AmaHy_arrow1_Scaffold_5 - View
Aquilegia oxysepala Aqoxy7G00291_Aqoxy7G00292 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.18NJDF K09872 - aquaporin PIP (PIP) arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QZ950J K09872 - aquaporin PIP (PIP) arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT2G45960 plasma membrane intrinsic protein 1B a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development. plasma membrane intrinsic protein 1B (PIP1B)%3B FUNCTIONS IN: water channel activity%3B INVOLVED IN: response to water deprivation%2C response to salt stress%2C transport%2C water transport%3B LOCATED IN: anchored to plasma membrane%2C plasma membrane%2C chloroplast%2C vacuole%2C membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Major intrinsic protein%2C conserved site (InterPro:IPR022357)%2C Aquaporin (InterPro:IPR012269)%2C Major intrinsic protein (InterPro:IPR000425)%3B BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1%3B4 (TAIR:AT4G00430.1)%3B Has 10777 Blast hits to 10745 proteins in 2215 species: Archae - 97%3B Bacteria - 5153%3B Metazoa - 1470%3B Fungi - 452%3B Plants - 2515%3B Viruses - 2%3B Other Eukaryotes - 1088 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT3G61430 plasma membrane intrinsic protein 1A a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development. plasma membrane intrinsic protein 1A (PIP1A)%3B FUNCTIONS IN: water channel activity%3B INVOLVED IN: response to water deprivation%2C response to salt stress%2C transport%2C water transport%3B LOCATED IN: mitochondrion%2C plasma membrane%2C vacuole%2C membrane%2C chloroplast envelope%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Major intrinsic protein%2C conserved site (InterPro:IPR022357)%2C Aquaporin (InterPro:IPR012269)%2C Major intrinsic protein (InterPro:IPR000425)%3B BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.1)%3B Has 10784 Blast hits to 10748 proteins in 2216 species: Archae - 97%3B Bacteria - 5154%3B Metazoa - 1474%3B Fungi - 450%3B Plants - 2515%3B Viruses - 2%3B Other Eukaryotes - 1092 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT1G01620 plasma membrane intrinsic protein 1C a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development. plasma membrane intrinsic protein 1C (PIP1C)%3B FUNCTIONS IN: water channel activity%3B INVOLVED IN: response to water deprivation%2C response to salt stress%2C transport%2C water transport%3B LOCATED IN: plasma membrane%2C chloroplast%2C membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Major intrinsic protein%2C conserved site (InterPro:IPR022357)%2C Aquaporin (InterPro:IPR012269)%2C Major intrinsic protein (InterPro:IPR000425)%3B BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1%3B4 (TAIR:AT4G00430.1)%3B Has 10781 Blast hits to 10762 proteins in 2222 species: Archae - 88%3B Bacteria - 5165%3B Metazoa - 1470%3B Fungi - 448%3B Plants - 2514%3B Viruses - 2%3B Other Eukaryotes - 1094 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT4G00430 plasma membrane intrinsic protein 1;4 a member of the plasma membrane intrinsic protein subfamily PIP1. plasma membrane intrinsic protein 1%3B4 (PIP1%3B4)%3B FUNCTIONS IN: water channel activity%3B INVOLVED IN: response to water deprivation%2C transport%3B LOCATED IN: plasma membrane%2C membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Major intrinsic protein%2C conserved site (InterPro:IPR022357)%2C Aquaporin (InterPro:IPR012269)%2C Major intrinsic protein (InterPro:IPR000425)%3B BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B (TAIR:AT2G45960.1)%3B Has 10702 Blast hits to 10683 proteins in 2216 species: Archae - 88%3B Bacteria - 5147%3B Metazoa - 1472%3B Fungi - 442%3B Plants - 2512%3B Viruses - 2%3B Other Eukaryotes - 1039 (source: NCBI BLink). Chr4 - View
Amborella trichopoda ATR0680G415 AmTr_v1.0_scaffold00009 - View
Brassica carinata BcaC07g40640 ChrC07 + View
Brassica carinata BcaC01g06882 ChrC01 + View
Brassica carinata BcaC04g24172 ChrC04 + View
Brassica carinata BcaB01g02167 ChrB01 + View
Brassica carinata BcaB01g02248 ChrB01 - View
Brassica carinata BcaC02g12164 ChrC02 - View
Brassica carinata BcaC01g05101 ChrC01 - View
Brassica carinata BcaB01g03243 ChrB01 - View
Brassica napus C09p00360 C09 - View
Brassica napus C04p71960 C04 + View
Brassica napus A05p05920 A05 + View
Brassica napus C08p36280 C08 + View
Brassica napus A09p00500 A09 + View
Brassica napus A03p25420 A03 + View
Brassica napus C04p06850 C04 + View
Brassica napus C03p39240 C03 + View
Brassica napus C03p30320 C03 + View
Brassica napus A09p53470 A09 + View
Brassica napus A04p34170 A04 + View
Brassica napus A03p32200 A03 + View
Brassica oleracea BolC3t16195H C3 + View
Brassica oleracea BolC8t51210H C8 + View
Brassica oleracea BolC9t52971H C9 - View
Brassica oleracea BolC4t22307H C4 + View
Brassica oleracea BolC5t28832H C5 + View
Brassica oleracea BolC3t15382H C3 + View
Brassica rapa BraA05t19555Z A05 + View
Brassica rapa BraA03t12390Z A03 + View
Brassica rapa BraA09t35710Z A09 - View
Brassica rapa BraA10t42318Z A10 + View
Brassica rapa BraA04t18878Z A04 + View
Beta vulgaris EL10Ac1g00405 PTHR19139:SF169 - AQUAPORIN PIP1-4-RELATED Chr1_EL10_PGA_scaffold3 - View
Capsicum annuum CAN.G78.85 PGAv.1.6.scaffold78 + View
Cannabis sativa CANSAT56G4037 NC_044371.1 - View
Corylus avellana Haze_08790 Similar to PIP1.4: Probable aquaporin PIP1-4 (Arabidopsis thaliana OX%3D3702) 4 + View
Corylus avellana Haze_15520 Similar to PIP1-2: Aquaporin PIP1-2 (Arabidopsis thaliana OX%3D3702) 11 + View
Coffea canephora Cc02_g38120 Aquaporin PIP1-3 chr2 + View
Citrus clementina Ciclev10021502m.g scaffold_3 - View
Carpinus fangiana Cfa003911 Cfa01 - View
Carpinus fangiana Cfa012219 Cfa05 - View
Cardamine hirsuta CARHR141230 Aquaporin Chr4 + View
Cardamine hirsuta CARHR171770 Aquaporin Chr5 + View
Cardamine hirsuta CARHR248520 Aquaporin Chr8 - View
Cardamine hirsuta CARHR000730 Aquaporin Chr1 + View
Carya illinoinensis CiPaw.12G092100 PTHR19139//PTHR19139:SF146 - AQUAPORIN TRANSPORTER // SUBFAMILY NOT NAMED Chr12 - View
Carya illinoinensis CiPaw.01G062500 PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED Chr01 + View
Citrullus lanatus ClCG01G002610 Aquaporin protein 7 CG_Chr01 - View
Cucumis melo MELO3C005685.2 Aquaporin chr09 + View
Corchorus olitorius COL.COLO4_12721 Major intrinsic protein AWUE01014940.1 + View
Chenopodium quinoa AUR62004367 PIP1.4: Probable aquaporin PIP1-4 C_Quinoa_Scaffold_4250 + View
Chenopodium quinoa AUR62010692 PIP1.4: Probable aquaporin PIP1-4 C_Quinoa_Scaffold_1280 + View
Chenopodium quinoa AUR62022576 PIP1.4: Probable aquaporin PIP1-4 C_Quinoa_Scaffold_1870 + View
Chenopodium quinoa AUR62017190 PIP1.4: Probable aquaporin PIP1-4 C_Quinoa_Scaffold_3489 - View
Capsella rubella Carub.0001s0060 PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED scaffold_1 + View
Capsella rubella Carub.0006s3683 PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED scaffold_6 + View
Capsella rubella Carub.0004s2866 PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED scaffold_4 + View
Capsella rubella Carub.0005s2812 PTHR19139:SF90 - AQUAPORIN PIP1-5-RELATED scaffold_5 + View
Daucus carota DCAR_004627 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv32491 GWHABJS00000020 + View
Durio zibethinus Duzib068G1020 NW_019167838.1 + View
Durio zibethinus Duzib138G0787 NW_019167893.1 + View
Durio zibethinus Duzib205G1924 NW_019168381.1 + View
Erigeron canadensis ECA246G4393 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.D01836 Chr04 + View
Erythranthe guttata Migut.B01762 scaffold_2 + View
Erythranthe guttata Migut.A00738 scaffold_1 + View
Eutrema salsugineum Thhalv10028860m.g PTHR19139:SF169 - AQUAPORIN PIP1-4-RELATED scaffold_3 - View
Eutrema salsugineum Thhalv10008397m.g PTHR19139:SF169 - AQUAPORIN PIP1-4-RELATED scaffold_5 - View
Eutrema salsugineum Thhalv10006141m.g PTHR19139:SF169 - AQUAPORIN PIP1-4-RELATED scaffold_19 - View
Eutrema salsugineum Thhalv10001573m.g PTHR19139:SF169 - AQUAPORIN PIP1-4-RELATED scaffold_22 + View
Fragaria x ananassa FAN03G1324 PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED Fvb7-3 - View
Fragaria x ananassa FAN10G1505 PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED Fvb7-1 + View
Fragaria x ananassa FAN08G1030 PTHR19139:SF169 - AQUAPORIN PIP1-4-RELATED Fvb5-3 - View
Fragaria x ananassa FAN04G0259 PTHR19139:SF169 - AQUAPORIN PIP1-4-RELATED Fvb5-4 + View
Fragaria x ananassa FAN06G3942 PTHR19139:SF169 - AQUAPORIN PIP1-4-RELATED Fvb7-2 + View
Fragaria x ananassa FAN01G1033 PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED Fvb7-4 - View
Fragaria x ananassa FAN10G0931 PTHR19139:SF169 - AQUAPORIN PIP1-4-RELATED Fvb7-1 + View
Fragaria x ananassa FAN13G2594 PTHR19139:SF169 - AQUAPORIN PIP1-4-RELATED Fvb5-2 + View
Fragaria x ananassa FAN06G4248 PTHR19139:SF169 - AQUAPORIN PIP1-4-RELATED Fvb7-2 + View
Fragaria vesca FvH4_5g02630 PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED Fvb5 + View
Fragaria vesca FvH4_7g14430 PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED Fvb7 + View
Gossypium hirsutum Gohir.D08G201700 PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED D08 + View
Gossypium hirsutum Gohir.A11G089300 PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED A11 + View
Gossypium hirsutum Gohir.D11G093600 PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED D11 + View
Gossypium hirsutum Gohir.D07G147801 PTHR19139//PTHR19139:SF146 - AQUAPORIN TRANSPORTER // SUBFAMILY NOT NAMED D07 - View
Glycine max Glyma.11G023200 PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED Gm11 - View
Glycine max Glyma.08G015300 PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED Gm08 + View
Glycine max Glyma.01G220600 PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED Gm01 + View
Glycine max Glyma.05G208700 PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED Gm05 + View
Gossypium raimondii Gorai.007G100000 Chr07 + View
Gossypium raimondii Gorai.001G169000 Chr01 - View
Helianthus annuus HanXRQChr06g0165891 Probable aquaporin PIP1-2 HanXRQChr06 + View
Lotus japonicus Lj4g0025304 PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED chr4 - View
Lonicera japonica Lj2A184T49 GWHAAZE00000002 - View
Lonicera japonica Lj7C511G7 GWHAAZE00000007 - View
Lonicera japonica Lj8A220T89 GWHAAZE00000008 - View
Malus domestica MD14G1106500 plasma membrane intrinsic protein 1 Chr14 + View
Malus domestica MD01G1062800 plasma membrane intrinsic protein 1 Chr01 + View
Malus domestica MD07G1136400 plasma membrane intrinsic protein 1 Chr07 - View
Manihot esculenta Manes.02G020100 Chromosome02 + View
Manihot esculenta Manes.01G059600 Chromosome01 + View
Nelumbo nucifera Nn1g01548 chr1 + View
Nicotiana tabacum Nitab4.5_0000583g0150 Major intrinsic protein, Major intrinsic protein, conserved site, Aquaporin-like Nitab4.5_0000583 + View
Olea europaea Oeu052954.1 chr3 - View
Petunia axillaris Peaxi162Scf00020g00516 plasma membrane intrinsic protein 1 Peaxi162Scf00020 + View
Punica granatum PGR031G0798 NC_045127.1 - View
Punica granatum PGR031G3882 NC_045127.1 - View
Prunus persica Prupe.5G101400 PTHR19139:SF169 - AQUAPORIN PIP1-4-RELATED Pp05 + View
Populus trichocarpa Potri.003G128600 PTHR19139//PTHR19139:SF169 - AQUAPORIN TRANSPORTER // AQUAPORIN PIP1-4-RELATED Chr03 + View
Phaseolus vulgaris Phvul.002G290400 PTHR19139:SF169 - AQUAPORIN PIP1-4-RELATED Chr02 + View
Quercus lobata QL08p048278 8 - View
Quercus lobata QL12p032741 12 - View
Rosa chinensis RcHm_v2.0_Chr7g0197451 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim07G0090200 chr07 - View
Rhododendron simsii Rhsim02G0232000 chr02 + View
Salvia bowleyana SalBow1G7131 GWHASIU00000001 + View
Salvia bowleyana SalBow3G2611 GWHASIU00000006 - View
Salix brachista Sabra03G0091500 GWHAAZH00000003 + View
Simmondsia chinensis Sc23g0002840 GWHAASQ00000023 - View
Sechium edule Sed0012240 LG05 - View
Solanum lycopersicum Solyc08g081190.3 plasma membrane intrinsic protein 1.5 SL4.0ch08 + View
Solanum lycopersicum Solyc01g094690.4 plasma membrane intrinsic protein 1.2 SL4.0ch01 + View
Schrenkiella parvula Sp6g00460 PTHR19139:SF169 - AQUAPORIN PIP1-4-RELATED ch6-1 - View
Schrenkiella parvula Sp4g28030 PTHR19139:SF169 - AQUAPORIN PIP1-4-RELATED ch4-6 + View
Schrenkiella parvula Sp5g01970 PTHR19139:SF169 - AQUAPORIN PIP1-4-RELATED ch5-1 - View
Schrenkiella parvula Sp1g00700 PTHR19139:SF169 - AQUAPORIN PIP1-4-RELATED ch1-1 + View
Solanum pennellii Sopen01g038500 a member of the plasma membrane intrinsic protein subfamily PIP1. | TRANSMEMBRANE PROTEIN C (TMP-C) | FUNCTIONS IN: water channel activity | INVOLVED IN: response to water deprivation, transport | LOCATED IN: membrane | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site , Major intrinsic protein | BEST Arabidopsis thaliana protein match is: plasma membrane intrinsic protein 1B Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400000045 Water channel protein ST4.03ch01 + View
Solanum tuberosum PGSC0003DMG400012337 Aquaporin PIP-type pTOM75 ST4.03ch08 + View
Selenicereus undatus Hund11463 Scaffold_10417 - View
Selenicereus undatus Hund27268 Scaffold_2055 - View
Trochodendron aralioides TAR375G1049 group15 + View
Trochodendron aralioides TAR629G1193 group0 + View
Trochodendron aralioides TAR636G2993 group1 + View
Theobroma cacao Thecc.03G280200 Plasma membrane intrinsic protein 1 Chromosome_3 + View
Theobroma cacao Thecc.01G358200 Plasma membrane intrinsic protein 1B Chromosome_1 - View
Tarenaya hassleriana THA.LOC104809384 aquaporin PIP1-3-like NW_010965019.1 - View
Tarenaya hassleriana THA.LOC104817296 aquaporin PIP1-1-like NW_010965946.1 + View
Tarenaya hassleriana THA.LOC104825842 aquaporin PIP1-3-like NW_010967707.1 + View
Tripterygium wilfordii TWI14G1131 NC_052249.1 + View
Tripterygium wilfordii TWI59G1325 NC_052248.1 + View
Utricularia gibba unitig_8.g3799 unitig_8 - View
Utricularia gibba unitig_22.g5351 unitig_22 - View
Vaccinium macrocarpon vmacro13961 Similar to PIP1-2: Aquaporin PIP1-2 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro20936 Similar to PIP1-2: Probable aquaporin PIP1-2 (Oryza sativa subsp. japonica OX%3D39947) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G2370 CM024069.1 + View
Vitis vinifera GSVIVG01026944001 chr15 - View
Zea mays Zm00001eb074210 Zm00001e007271 Plasma membrane intrinsic protein plasma membrane intrinsic protein1 2 - View