Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold73G24384 scaffold73 - View
SGA_v2.0_scaffold130G34263 scaffold130 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G2380 LG-4 + View
Actinidia chinensis Actinidia12606 Lachesis_group19 + View
Actinidia chinensis Actinidia39416 Lachesis_group5 + View
Arabidopsis lyrata AL1G29160 scaffold_1 + View
Avicennia marina MSTRG.14985 ScioBoG_19538_HRSCAF_19626 + View
Avicennia marina MSTRG.6693 ScioBoG_102840_HRSCAF_103099 + View
Arabidopsis thaliana AT1G78580 trehalose-6-phosphate synthase Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division. trehalose-6-phosphate synthase (TPS1)%3B CONTAINS InterPro DOMAIN/s: Alpha%2Calpha-trehalose-phosphate synthase (InterPro:IPR012766)%2C Glycosyl transferase%2C family 20 (InterPro:IPR001830)%2C Trehalose-phosphatase (InterPro:IPR003337)%3B BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 2 (TAIR:AT1G16980.1)%3B Has 6189 Blast hits to 3807 proteins in 1021 species: Archae - 45%3B Bacteria - 1772%3B Metazoa - 831%3B Fungi - 808%3B Plants - 384%3B Viruses - 0%3B Other Eukaryotes - 2349 (source: NCBI BLink). Chr1 - View
Brassica napus A06p12880 A06 + View
Brassica napus C06p52480 C06 - View
Brassica oleracea BolC5t30235H C5 + View
Beta vulgaris EL10Ac4g08423 PTHR10788//PTHR10788:SF6 - TREHALOSE-6-PHOSPHATE SYNTHASE // BCDNA.GH08860 Chr4_EL10_PGA_scaffold1 + View
Camellia sinensis var. sinensis CSS0045426 trehalose-6-phosphate synthase [Camellia sinensis] Chr7 + View
Cannabis sativa CANSAT56G0787 NC_044371.1 - View
Chenopodium quinoa AUR62019657 TPS4: Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 4 C_Quinoa_Scaffold_2127 + View
Capsella rubella Carub.0001s1671 scaffold_1 + View
Capsella rubella Carub.0002s2543 scaffold_2 - View
Daucus carota DCAR_017588 hypothetical protein DCARv2_Chr5 - View
Daucus carota DCAR_021041 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv13360 GWHABJS00000001 - View
Davidia involucrata Dinv26705 GWHABJS00000013 + View
Durio zibethinus Duzib213G0010 NW_019167993.1 + View
Erigeron canadensis ECA236G4691 Conyza_canadensis_scaffold:3 - View
Erigeron canadensis ECA240G0098 Conyza_canadensis_scaffold:5 - View
Eucalyptus grandis Eucgr.F03232 Chr06 - View
Erythranthe guttata Migut.M00691 scaffold_13 - View
Erythranthe guttata Migut.H02026 scaffold_8 + View
Fragaria x ananassa FAN25G1895 PTHR10788//PTHR10788:SF6 - TREHALOSE-6-PHOSPHATE SYNTHASE // BCDNA.GH08860 Fvb3-1 + View
Fragaria x ananassa FAN21G3278 PTHR10788//PTHR10788:SF6 - TREHALOSE-6-PHOSPHATE SYNTHASE // BCDNA.GH08860 Fvb3-2 - View
Fragaria x ananassa FAN16G2305 PTHR10788//PTHR10788:SF6 - TREHALOSE-6-PHOSPHATE SYNTHASE // BCDNA.GH08860 Fvb3-3 - View
Fragaria x ananassa FAN11G3841 PTHR10788//PTHR10788:SF6 - TREHALOSE-6-PHOSPHATE SYNTHASE // BCDNA.GH08860 Fvb3-4 + View
Gossypium hirsutum Gohir.A01G047300 PTHR10788//PTHR10788:SF6 - TREHALOSE-6-PHOSPHATE SYNTHASE // BCDNA.GH08860 A01 - View
Glycine max Glyma.13G264600 PTHR10788//PTHR10788:SF6 - TREHALOSE-6-PHOSPHATE SYNTHASE // BCDNA.GH08860 Gm13 - View
Lotus japonicus Lj3g0024113 PTHR10788//PTHR10788:SF6 - TREHALOSE-6-PHOSPHATE SYNTHASE // BCDNA.GH08860 chr3 + View
Lonicera japonica Lj8A146G69 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_7_100120 Lsat_1_v8_lg_7 - View
Nicotiana tabacum Nitab4.5_0001140g0180 Alpha,alpha-trehalose-phosphate synthase, HAD-like domain, Glycosyl transferase, family 20, Trehalose-phosphatase Nitab4.5_0001140 - View
Olea europaea Oeu058453.1 chr21 + View
Prunus persica Prupe.4G155900 Pp04 - View
Rhododendron simsii RhsimUnG0206600 ctg509 - View
Solanum lycopersicum Solyc07g062140.3 trehalose-phosphate synthase 1 SL4.0ch07 - View
Solanum pennellii Sopen07g030410 Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division. | trehalose-6-phosphate synthase (TPS1) | CONTAINS InterPro DOMAIN/s: Alpha,alpha-trehalose-phosphate synthase , Glycosyl transferase, family 20 , Trehalose-phosphatase | BEST Arabidopsis thaliana protein match is: trehalose-phosphatase/synthase 2 Spenn-ch07 - View
Solanum tuberosum PGSC0003DMG400007089 Trehalose-phosphate synthase 1 ST4.03ch07 - View
Vaccinium macrocarpon vmacro11974 Similar to TPS1: Alpha,alpha-trehalose-phosphate synthase 1 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01014092001 chr19 - View