Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold73G24355 scaffold73 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G2560 LG-4 + View
Actinidia chinensis Actinidia04594 Lachesis_group5 - View
Actinidia chinensis Actinidia35179 Lachesis_group2 + View
Arabidopsis lyrata AL2G38760 scaffold_2 - View
Avicennia marina MSTRG.15006 ScioBoG_19538_HRSCAF_19626 - View
Avicennia marina MSTRG.14273 ScioBoG_18782_HRSCAF_18867 + View
Avicennia marina MSTRG.6709 ScioBoG_102840_HRSCAF_103099 - View
Arabidopsis thaliana AT1G78390 nine-cis-epoxycarotenoid dioxygenase 9 Encodes 9-cis-epoxycarotenoid dioxygenase%2C a key enzyme in the biosynthesis of abscisic acid. The expression of this gene increases during the first 6h of imbibition. nine-cis-epoxycarotenoid dioxygenase 9 (NCED9)%3B CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294)%3B BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 3 (TAIR:AT3G14440.1)%3B Has 2892 Blast hits to 2853 proteins in 497 species: Archae - 16%3B Bacteria - 810%3B Metazoa - 240%3B Fungi - 201%3B Plants - 889%3B Viruses - 0%3B Other Eukaryotes - 736 (source: NCBI BLink). Chr1 - View
Brassica napus C06p52330 C06 - View
Brassica rapa BraA03t13031Z A03 - View
Camellia sinensis var. sinensis CSS0033791 hypothetical protein VITISV_018449 [Vitis vinifera] Chr7 + View
Capsicum annuum CAN.G1003.11 PGAv.1.6.scaffold1003 + View
Cannabis sativa CANSAT56G3902 NC_044371.1 - View
Corylus avellana Haze_08498 Similar to NCED1: 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic (Phaseolus vulgaris OX%3D3885) 4 + View
Coffea canephora Cc05_g10210 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic chr5 - View
Citrus clementina Ciclev10019364m.g scaffold_3 - View
Cardamine hirsuta CARHR071900 9-cis-epoxycarotenoid dioxygenase, putative Chr2 - View
Citrullus lanatus ClCG07G010550 9-cis-epoxycarotenoid dioxygenase CG_Chr07 + View
Chenopodium quinoa AUR62017575 Protein of unknown function C_Quinoa_Scaffold_3458 - View
Capsella rubella Carub.0002s2529 PTHR10543//PTHR10543:SF26 - BETA-CAROTENE DIOXYGENASE // 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED scaffold_2 - View
Cucumis sativus L. CsaV3_4G007760 9-cis-epoxycarotenoid dioxygenase chr4 - View
Daucus carota DCAR_017563 9-cis-epoxycarotenoid dioxygenase DCARv2_Chr5 + View
Daucus carota DCAR_021059 9-cis-epoxycarotenoid dioxygenase DCARv2_Chr6 - View
Daucus carota DCAR_019639 9-cis-epoxycarotenoid dioxygenase DCARv2_Chr5 + View
Davidia involucrata Dinv13307 GWHABJS00000001 - View
Davidia involucrata Dinv26663 GWHABJS00000013 + View
Durio zibethinus Duzib268G0173 NW_019168270.1 + View
Durio zibethinus Duzib213G0928 NW_019167993.1 + View
Durio zibethinus Duzib192G0340 NW_019168037.1 + View
Erigeron canadensis ECA234G3656 Conyza_canadensis_scaffold:4 + View
Erigeron canadensis ECA236G3052 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.F03199 Chr06 - View
Erythranthe guttata Migut.H02072 scaffold_8 - View
Erythranthe guttata Migut.M00656 scaffold_13 + View
Eutrema salsugineum Thhalv10019707m.g PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED scaffold_9 + View
Fragaria x ananassa FAN25G1277 PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED Fvb3-1 - View
Fragaria x ananassa FAN21G3899 PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED Fvb3-2 + View
Gossypium hirsutum Gohir.A01G041300 K09840 - 9-cis-epoxycarotenoid dioxygenase (NCED) A01 - View
Glycine max Glyma.15G250100 PTHR10543//PTHR10543:SF26 - BETA-CAROTENE DIOXYGENASE // 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED Gm15 + View
Lupinus albus Lalb_Chr25g0285361 K09840 - 9-cis-epoxycarotenoid dioxygenase (NCED) Lalb_Chr25 - View
Lonicera japonica Lj1P809T13 GWHAAZE00000001 - View
Lonicera japonica Lj8C141T9 GWHAAZE00000008 - View
Lactuca sativa Lsat_1_v5_gn_7_100040 Lsat_1_v8_lg_7 - View
Medicago truncatula Medtr2g070460 9-cis-epoxycarotenoid dioxygenase chr2 - View
Olea europaea Oeu012719.1 chr6 - View
Olea europaea Oeu058431.1 chr21 - View
Petunia axillaris Peaxi162Scf00111g00077 nine-cis-epoxycarotenoid dioxygenase 3 Peaxi162Scf00111 - View
Punica granatum PGR031G1042 NC_045127.1 - View
Prunus persica Prupe.4G150100 PTHR10543:SF26 - 9-CIS-EPOXYCAROTENOID DIOXYGENASE NCED3, CHLOROPLASTIC-RELATED Pp04 + View
Pisum sativum Psat1g001480 Retinal pigment epithelial membrane protein chr1LG6 + View
Salvia bowleyana SalBow7G3817 GWHASIU00000005 + View
Solanum lycopersicum Solyc07g056570.1 notabilis SL4.0ch07 - View
Solanum pennellii Sopen07g029920 Encodes 9- Spenn-ch07 - View
Solanum tuberosum PGSC0003DMG400027633 9-cis-epoxycarotenoid dioxygenase ST4.03ch07 - View
Trochodendron aralioides TAR627G1053 group6 - View
Trochodendron aralioides TAR626G1577 group3 + View
Theobroma cacao Thecc.07G147400 Nine-cis-epoxycarotenoid dioxygenase 3 Chromosome_7 + View
Tarenaya hassleriana THA.LOC104810410 9-cis-epoxycarotenoid dioxygenase NCED3%2C chloroplastic-like NW_010965216.1 - View
Utricularia gibba unitig_747.g21596 unitig_747 - View
Vaccinium macrocarpon vmacro12018 Similar to NCED1: 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic (Solanum lycopersicum OX%3D4081) chr11_Vaccinium_macrocarpon_Stevens_v1 + View