Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold71G23935 scaffold71 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G2670 LG-4 + View
Aethionema arabicum Aa31LG10G1500 LG-10 - View
Actinidia chinensis Actinidia24419 Lachesis_group27 - View
Arabidopsis lyrata AL2G31890 scaffold_2 - View
Arabidopsis lyrata AL1G62510 scaffold_1 + View
Avicennia marina MSTRG.10906 ScioBoG_14204_HRSCAF_14270 + View
Avicennia marina MSTRG.9545 ScioBoG_12795_HRSCAF_12848 - View
Amaranthus hybridus Ah.08g217410 RING-H2 finger protein ATL60 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase ATL60) AmaHy_arrow1_Scaffold_8 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.75YBZZ PTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3 arahy.Tifrunner.gnm1.Arahy.02 + View
Arabidopsis thaliana AT1G53820 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT1G72310.1)%3B Has 9301 Blast hits to 9282 proteins in 297 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2391%3B Fungi - 736%3B Plants - 4843%3B Viruses - 80%3B Other Eukaryotes - 1251 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G72220 RING/U-box superfamily protein RING/U-box superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: inflorescence meristem%2C root%2C flower%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type (InterPro:IPR001841)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%3B BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT4G33565.1)%3B Has 9784 Blast hits to 9740 proteins in 308 species: Archae - 0%3B Bacteria - 7%3B Metazoa - 2351%3B Fungi - 909%3B Plants - 4998%3B Viruses - 86%3B Other Eukaryotes - 1433 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB04g18839 ChrB04 - View
Brassica carinata BcaC03g15350 ChrC03 - View
Brassica rapa BraA07t31396Z A07 - View
Brassica rapa BraA03t13024Z A03 - View
Cicer arietinum L. Ca_23450_v3 Ca_LG7_v3 - View
Corylus avellana Haze_16142 Similar to ATL43: RING-H2 finger protein ATL43 (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc04_g00640 Putative RING-H2 finger protein ATL3 chr4 + View
Citrus clementina Ciclev10026808m.g scaffold_7 - View
Cardamine hirsuta CARHR044110 Ring finger protein, putative Chr1 + View
Cardamine hirsuta CARHR065080 Ring finger protein, putative Chr2 - View
Citrullus lanatus ClCG09G001420 Ring finger protein, putative CG_Chr09 - View
Cucumis melo MELO3C024304.2 RING-H2 finger protein ATL60-like chr01 + View
Carica papaya Cpa.g.sc25.200 supercontig_25 - View
Chenopodium quinoa AUR62025610 ATL60: RING-H2 finger protein ATL60 C_Quinoa_Scaffold_1677 + View
Chenopodium quinoa AUR62001395 ATL60: RING-H2 finger protein ATL60 C_Quinoa_Scaffold_2716 + View
Capsella rubella Carub.0002s1903 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED scaffold_2 - View
Capsella rubella Carub.0001s4308 PTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3 scaffold_1 + View
Cucumis sativus L. CsaV3_7G033910 RING-H2 finger protein ATL60-like chr7 + View
Daucus carota DCAR_007663 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_016088 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv20377 GWHABJS00000019 - View
Durio zibethinus Duzib160G0682 NW_019168015.1 - View
Durio zibethinus Duzib192G0039 NW_019168037.1 + View
Durio zibethinus Duzib235G0123 NW_019167982.1 - View
Erigeron canadensis ECA232G2925 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.J02590 Chr10 + View
Erythranthe guttata Migut.I01138 scaffold_9 - View
Eutrema salsugineum Thhalv10012011m.g PTHR14155:SF99 - RING-H2 FINGER PROTEIN ATL3 scaffold_7 - View
Gossypium hirsutum Gohir.A05G141900 PTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3 A05 - View
Gossypium hirsutum Gohir.D05G144200 PTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3 D05 - View
Gossypium hirsutum Gohir.A10G048000 PTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3 A10 + View
Glycine max Glyma.07G046400 PTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3 Gm07 - View
Glycine max Glyma.16G014600 PTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3 Gm16 - View
Gossypium raimondii Gorai.009G148100 Chr09 - View
Helianthus annuus HanXRQChr15g0497291 Probable RING/U-box superfamily protein HanXRQChr15 - View
Hydrangea macrophylla Hma1.2p1_0090F.1_g045730 Hma1.2p1_0090F.1 + View
Lupinus albus Lalb_Chr10g0101081 PTHR14155:SF99 - RING-H2 FINGER PROTEIN ATL3 Lalb_Chr10 + View
Lotus japonicus Lj3g0025964 PTHR14155//PTHR14155:SF99 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL3 chr3 - View
Lonicera japonica Lj9C539T22 GWHAAZE00000009 - View
Lonicera japonica Lj5C28T7 GWHAAZE00000005 + View
Lactuca sativa Lsat_1_v5_gn_4_90761 PTHR14155//PTHR14155:SF122 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Lsat_1_v8_lg_4 + View
Medicago truncatula Medtr8g023400 zinc finger, C3HC4 type (RING finger) protein chr8 - View
Petunia axillaris Peaxi162Scf00207g01514 RING-H2 finger protein ATL3 Peaxi162Scf00207 - View
Punica granatum PGR119G0984 NC_045132.1 - View
Phaseolus vulgaris Phvul.009G223100 K10663 - E3 ubiquitin-protein ligase ATL4 [EC:6.3.2.19] (ATL4) Chr09 + View
Phaseolus vulgaris Phvul.010G122500 PTHR14155:SF99 - RING-H2 FINGER PROTEIN ATL3 Chr10 + View
Simmondsia chinensis Sc15g0000820 GWHAASQ00000015 - View
Simmondsia chinensis Sc08g0009300 GWHAASQ00000008 + View
Solanum lycopersicum Solyc03g123690.1 RING/U-box superfamily protein (AHRD V3.3 *-* A0A2U1L356_ARTAN) SL4.0ch03 - View
Schrenkiella parvula Sp1g40310 PTHR14155:SF99 - RING-H2 FINGER PROTEIN ATL3 ch1-2 + View
Schrenkiella parvula Sp5g27310 PTHR14155//PTHR14155:SF94 - RING FINGER DOMAIN-CONTAINING // RING-H2 FINGER PROTEIN ATL33-RELATED ch5-6 - View
Solanum pennellii Sopen03g041460 hypothetical protein Spenn-ch03 - View
Trochodendron aralioides TAR626G0295 group3 + View
Theobroma cacao Thecc.06G130900 RING-H2 finger protein ATL3 Chromosome_6 - View
Tarenaya hassleriana THA.LOC104810397 RING-H2 finger protein ATL60 NW_010965216.1 - View
Tripterygium wilfordii TWI14G0372 NC_052249.1 + View
Tripterygium wilfordii TWI59G0054 NC_052248.1 + View
Vigna mungo VMungo0331G0606 CM024078.1 - View