Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Arabidopsis lyrata | AL2G37300 | scaffold_2 | - | View | |
Avicennia marina | MSTRG.25331 | ScioBoG_4119_HRSCAF_4138 | + | View | |
Amaranthus hybridus | Ah.05g167550 | AmaHy_arrow1_Scaffold_5 | - | View | |
Aquilegia oxysepala | Aqoxy5G02191 | CHR05 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.5V4LVB | PF02576 - Putative ribosome maturation factor RimP (DUF150) | arahy.Tifrunner.gnm1.Arahy.17 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.EV65WI | 3.4.19.12//3.4.22.69 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase // SARS coronavirus main proteinase / Severe acute respiratory syndrome coronavirus main protease | arahy.Tifrunner.gnm1.Arahy.08 | + | View |
Arabidopsis thaliana | AT1G77122 | Uncharacterized protein family UPF0090 Uncharacterised protein family UPF0090%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0090 (InterPro:IPR003728)%3B BEST Arabidopsis thaliana protein match is: Uncharacterised protein family UPF0090 (TAIR:AT1G69210.1)%3B Has 3296 Blast hits to 1357 proteins in 179 species: Archae - 2%3B Bacteria - 148%3B Metazoa - 1652%3B Fungi - 253%3B Plants - 200%3B Viruses - 109%3B Other Eukaryotes - 932 (source: NCBI BLink). | Chr1 | - | View |
Brassica carinata | BcaC08g47210 | ChrC08 | - | View | |
Brassica napus | C06p51290 | C06 | - | View | |
Brassica napus | A07p42700 | A07 | - | View | |
Brassica oleracea | BolC6t40150H | C6 | - | View | |
Brassica rapa | BraA07t31792Z | A07 | - | View | |
Beta vulgaris | EL10Ac1g01476 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Chr1_EL10_PGA_scaffold3 | - | View |
Cicer arietinum L. | Ca_16653_v3 | Ca_LG5_v3 | - | View | |
Corylus avellana | Haze_17713 | Protein of unknown function | 7 | - | View |
Coffea canephora | Cc10_g12860 | Putative uncharacterized protein | chr10 | + | View |
Citrus clementina | Ciclev10001907m.g | scaffold_5 | - | View | |
Carpinus fangiana | Cfa018361 | Cfa07 | + | View | |
Carya illinoinensis | CiPaw.16G017600 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Chr16 | + | View |
Citrullus lanatus | ClCG08G006460 | Ribosome maturation factor rimP | CG_Chr08 | - | View |
Cucumis melo | MELO3C008408.2 | Ribosome maturation factor RimP | chr03 | + | View |
Carica papaya | Cpa.g.sc49.62 | supercontig_49 | + | View | |
Chenopodium quinoa | AUR62026780 | Protein of unknown function | C_Quinoa_Scaffold_2081 | + | View |
Chenopodium quinoa | AUR62013496 | rimP: Ribosome maturation factor RimP | C_Quinoa_Scaffold_1611 | - | View |
Cucumis sativus L. | CsaV3_6G030960 | Ribosome maturation factor RimP like | chr6 | + | View |
Davidia involucrata | Dinv41120 | GWHABJS00000002 | - | View | |
Erigeron canadensis | ECA246G5345 | Conyza_canadensis_scaffold:8 | + | View | |
Eucalyptus grandis | Eucgr.F02739 | Chr06 | + | View | |
Erythranthe guttata | Migut.C01038 | scaffold_3 | + | View | |
Eutrema salsugineum | Thhalv10019703m.g | PF02576 - Putative ribosome maturation factor RimP (DUF150) | scaffold_9 | + | View |
Fragaria x ananassa | FAN27G0383 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Fvb2-1 | - | View |
Fragaria x ananassa | FAN20G1080 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Fvb2-3 | - | View |
Fragaria x ananassa | FAN15G2791 | Fvb2-4 | + | View | |
Fragaria vesca | FvH4_2g14620 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Fvb2 | + | View |
Gossypium hirsutum | Gohir.D05G243100 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | D05 | - | View |
Gossypium hirsutum | Gohir.A05G241800 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | A05 | - | View |
Glycine max | Glyma.06G122900 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Gm06 | - | View |
Glycine max | Glyma.04G240500 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Gm04 | + | View |
Gossypium raimondii | Gorai.009G252400 | Chr09 | - | View | |
Lupinus albus | Lalb_Chr11g0066441 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Lalb_Chr11 | - | View |
Lotus japonicus | Lj1g0028017 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | chr1 | + | View |
Lonicera japonica | Lj4A691T75 | GWHAAZE00000004 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_6_96600 | Lsat_1_v8_lg_6 | - | View | |
Magnolia biondii | MBI06_g18872_MAGBIO | AED:0.14 | Chr06 | + | View |
Malus domestica | MD05G1016000 | Uncharacterised protein family UPF0090 | Chr05 | - | View |
Manihot esculenta | Manes.02G175400 | Chromosome02 | - | View | |
Medicago truncatula | Medtr3g090140 | DUF150 family protein | chr3 | + | View |
Nelumbo nucifera | Nn5g28626 | chr5 | - | View | |
Punica granatum | PGR042G0343 | NC_045130.1 | - | View | |
Prunus persica | Prupe.8G019400 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Pp08 | - | View |
Populus trichocarpa | Potri.002G071700 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Chr02 | + | View |
Phaseolus vulgaris | Phvul.009G135000 | PF02576 - Putative ribosome maturation factor RimP (DUF150) | Chr09 | - | View |
Quercus lobata | QL02p025275 | CM012294 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr6g0277091 | RcHm_v2.0_Chr6 | + | View | |
Salix brachista | Sabra02G0056500 | GWHAAZH00000002 | + | View | |
Sechium edule | Sed0007582 | LG03 | - | View | |
Selenicereus undatus | Hund26727 | Scaffold_2055 | + | View | |
Trochodendron aralioides | TAR381G1145 | group11 | + | View | |
Theobroma cacao | Thecc.08G145000 | Uncharacterized protein family protein UPF0090 | Chromosome_8 | - | View |
Tripterygium wilfordii | TWI60G0779 | NC_052246.1 | + | View | |
Vitis vinifera | GSVIVG01010034001 | chr18 | - | View |