Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold34G13643 scaffold34 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G19320 LG-4 - View
Actinidia chinensis Actinidia12217 Lachesis_group25 + View
Actinidia chinensis Actinidia01377 Lachesis_group8 + View
Arabidopsis lyrata AL6G20370 scaffold_6 - View
Arabidopsis lyrata AL5G31740 scaffold_5 - View
Arabidopsis thaliana AT3G51320 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT3G62890.1)%3B Has 32632 Blast hits to 12262 proteins in 174 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 25%3B Fungi - 25%3B Plants - 32307%3B Viruses - 0%3B Other Eukaryotes - 275 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G09950 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a DYW-class PPR protein required for RNA editing at four sites in mitochondria of A. thaliana. Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G16480.1)%3B Has 58090 Blast hits to 13690 proteins in 227 species: Archae - 0%3B Bacteria - 7%3B Metazoa - 25%3B Fungi - 46%3B Plants - 57493%3B Viruses - 0%3B Other Eukaryotes - 519 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB01g00529 ChrB01 + View
Coffea canephora Cc02_g16770 Putative Pentatricopeptide repeat-containing protein At3g12770 chr2 + View
Citrus clementina Ciclev10024954m.g scaffold_7 - View
Ceratophyllum demersum CDE05G1929 3 - View
Cardamine hirsuta CARHR203380 Pentatricopeptide repeat-containing protein Chr6 + View
Cardamine hirsuta CARHR160900 Pentatricopeptide repeat-containing protein Chr5 - View
Carya illinoinensis CiPaw.04G091500 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr04 - View
Capsella rubella Carub.0006s0839 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_6 - View
Eucalyptus grandis Eucgr.I00314 Chr09 + View
Fragaria vesca FvH4_1g22400 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb1 - View
Glycine max Glyma.04G007000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm04 + View
Lonicera japonica Lj4P110T41 GWHAAZE00000004 + View
Manihot esculenta Manes.02G104400 Chromosome02 - View
Olea europaea Oeu028363.1 chr18 + View
Punica granatum PGR004G2492 NC_045131.1 + View
Prunus persica Prupe.6G172600 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Pp06 - View
Pisum sativum Psat4g098000 PPR repeat family chr4LG4 + View
Phaseolus vulgaris Phvul.009G001901 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr09 + View
Quercus lobata QL06p033335 6 - View
Rosa chinensis RcHm_v2.0_Chr2g0116541 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim10G0150000 chr10 - View
Simmondsia chinensis Sc08g0001250 GWHAASQ00000008 - View
Sechium edule Sed0001312 LG13 - View
Trochodendron aralioides TAR625G1265 group4 - View
Trochodendron aralioides TAR381G0594 group11 + View
Theobroma cacao Thecc.02G072700 Chromosome_2 + View
Vaccinium macrocarpon vmacro09086 Similar to PCMP-E5: Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G0532 CM024070.1 - View