Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold18G08530 scaffold18 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr6.2538 chr6 + View
Actinidia chinensis Actinidia05912 Lachesis_group11 - View
Arabidopsis lyrata AL7G48700 scaffold_7 - View
Arabidopsis lyrata AL5G16310 scaffold_5 - View
Avicennia marina MSTRG.3082 ScioBoG_102835_HRSCAF_103059 - View
Avicennia marina MSTRG.24089 ScioBoG_3895_HRSCAF_3912 + View
Arabidopsis thaliana AT3G27190 uridine kinase-like 2 One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870%2C At3g27190%2C At1g55810%2C At4g26510 and At3g27440) show a high level of identity%2C and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1)%2C UKL2%2C UKL3%2C UKL4 and UKL5%2C respectively. uridine kinase-like 2 (UKL2)%3B FUNCTIONS IN: uracil phosphoribosyltransferase activity%2C phosphotransferase activity%2C alcohol group as acceptor%2C kinase activity%2C ATP binding%3B INVOLVED IN: biosynthetic process%2C metabolic process%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083)%2C Uridine kinase (InterPro:IPR000764)%3B BEST Arabidopsis thaliana protein match is: uridine kinase/uracil phosphoribosyltransferase 1 (TAIR:AT5G40870.1)%3B Has 12747 Blast hits to 12735 proteins in 2617 species: Archae - 215%3B Bacteria - 9790%3B Metazoa - 531%3B Fungi - 482%3B Plants - 585%3B Viruses - 2%3B Other Eukaryotes - 1142 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G40870 uridine kinase/uracil phosphoribosyltransferase 1 Encodes a protein that with uridine kinase but not uracil phosphoribosyltransferase activities. uridine kinase/uracil phosphoribosyltransferase 1 (UK/UPRT1)%3B FUNCTIONS IN: uridine kinase activity%2C uracil phosphoribosyltransferase activity%2C kinase activity%2C ATP binding%3B INVOLVED IN: biosynthetic process%2C nucleoside metabolic process%2C metabolic process%3B LOCATED IN: cytoplasm%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083)%2C Phosphoribosyltransferase (InterPro:IPR000836)%2C Uridine kinase (InterPro:IPR000764)%3B BEST Arabidopsis thaliana protein match is: uridine kinase-like 2 (TAIR:AT3G27190.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaC06g33845 ChrC06 + View
Brassica carinata BcaC03g17431 ChrC03 - View
Brassica carinata BcaB06g27570 ChrB06 + View
Brassica carinata BcaB07g30183 ChrB07 + View
Brassica napus A06p41420 A06 + View
Brassica napus C04p47710 C04 + View
Brassica napus C07p36220 C07 - View
Brassica napus A04p13930 A04 + View
Brassica napus A02p35160 A02 - View
Brassica napus C02p53810 C02 - View
Brassica oleracea BolC2t11448H C2 - View
Brassica oleracea BolC4t26371H C4 + View
Brassica oleracea BolC7t44138H C7 - View
Brassica rapa BraA04t17058Z A04 + View
Brassica rapa BraA02t08523Z A02 - View
Brassica rapa BraA06t27068Z A06 + View
Camellia sinensis var. sinensis CSS0008331 PREDICTED: uridine kinase-like protein 1, chloroplastic [Nicotiana tomentosiformis] Chr2 - View
Cannabis sativa CANSAT64G2102 NC_044379.1 - View
Corylus avellana Haze_14859 Similar to UKL1: Uridine kinase-like protein 1, chloroplastic (Arabidopsis thaliana OX%3D3702) 5 + View
Coffea canephora Cc07_g00700 Uridine kinase-like protein 1, chloroplastic chr7 + View
Citrus clementina Ciclev10015123m.g scaffold_2 - View
Carpinus fangiana Cfa007241 Cfa03 - View
Cardamine hirsuta CARHR148390 Uridine kinase Chr5 - View
Carya illinoinensis CiPaw.03G054200 PTHR10285//PTHR10285:SF82 - URIDINE KINASE // SUBFAMILY NOT NAMED Chr03 + View
Capsella rubella Carub.0005s0542 PTHR10285//PTHR10285:SF82 - URIDINE KINASE // SUBFAMILY NOT NAMED scaffold_5 - View
Capsella rubella Carub.0007s3463 PTHR10285//PTHR10285:SF71 - URIDINE KINASE // URIDINE KINASE-LIKE PROTEIN 1, CHLOROPLASTIC-RELATED scaffold_7 - View
Davidia involucrata Dinv25667 GWHABJS00000012 + View
Durio zibethinus Duzib187G1463 NW_019167860.1 - View
Eucalyptus grandis Eucgr.J02325 Chr10 + View
Erythranthe guttata Migut.F00074 scaffold_6 - View
Eutrema salsugineum Thhalv10027737m.g PTHR10285:SF71 - URIDINE KINASE-LIKE PROTEIN 1, CHLOROPLASTIC-RELATED scaffold_14 - View
Fragaria x ananassa FAN09G3185 PTHR10285//PTHR10285:SF82 - URIDINE KINASE // SUBFAMILY NOT NAMED Fvb6-2 - View
Fragaria x ananassa FAN14G2453 PTHR10285//PTHR10285:SF82 - URIDINE KINASE // SUBFAMILY NOT NAMED Fvb6-1 + View
Fragaria x ananassa FAN05G3807 PTHR10285//PTHR10285:SF82 - URIDINE KINASE // SUBFAMILY NOT NAMED Fvb6-3 - View
Fragaria x ananassa FAN02G1279 PTHR10285//PTHR10285:SF82 - URIDINE KINASE // SUBFAMILY NOT NAMED Fvb6-4 + View
Fragaria vesca FvH4_6g53220 PTHR10285//PTHR10285:SF82 - URIDINE KINASE // SUBFAMILY NOT NAMED Fvb6 + View
Gossypium hirsutum Gohir.D07G234500 PTHR10285//PTHR10285:SF82 - URIDINE KINASE // SUBFAMILY NOT NAMED D07 + View
Gossypium hirsutum Gohir.A09G035100 PTHR10285//PTHR10285:SF82 - URIDINE KINASE // SUBFAMILY NOT NAMED A09 + View
Gossypium hirsutum Gohir.D09G036000 PTHR10285//PTHR10285:SF82 - URIDINE KINASE // SUBFAMILY NOT NAMED D09 + View
Gossypium hirsutum Gohir.A07G227400 PTHR10285//PTHR10285:SF71 - URIDINE KINASE // URIDINE KINASE-LIKE PROTEIN 1, CHLOROPLASTIC-RELATED A07 + View
Glycine max Glyma.16G058200 PTHR10285//PTHR10285:SF71 - URIDINE KINASE // URIDINE KINASE-LIKE PROTEIN 1, CHLOROPLASTIC-RELATED Gm16 + View
Glycine max Glyma.19G089100 PF00485//PF14681 - Phosphoribulokinase / Uridine kinase family (PRK) // Uracil phosphoribosyltransferase (UPRTase) Gm19 - View
Gossypium raimondii Gorai.001G270100 Chr01 + View
Gossypium raimondii Gorai.006G041100 Chr06 + View
Helianthus annuus HanXRQChr14g0450681 Probable uridine kinase/uracil phosphoribosyltransferase 1 HanXRQChr14 + View
Helianthus annuus HanXRQChr07g0198281 Probable uridine kinase-like 2 HanXRQChr07 - View
Lupinus albus Lalb_Chr24g0403351 2.4.2.9//2.7.1.48 - Uracil phosphoribosyltransferase / UMP pyrophosphorylase // Uridine kinase / Uridine monophosphokinase Lalb_Chr24 - View
Lotus japonicus Lj1g0009104 PTHR10285//PTHR10285:SF82 - URIDINE KINASE // SUBFAMILY NOT NAMED chr1 + View
Lonicera japonica Lju41A51T46 GWHAAZE00000094 + View
Lactuca sativa Lsat_1_v5_gn_2_94120 PTHR10285//PTHR10285:SF82 - URIDINE KINASE // SUBFAMILY NOT NAMED Lsat_1_v8_lg_2 + View
Malus domestica MD17G1013500 uridine kinase/uracil phosphoribosyltransferase 1 Chr17 - View
Malus domestica MD09G1012900 uridine kinase/uracil phosphoribosyltransferase 1 Chr09 - View
Manihot esculenta Manes.15G159500 Chromosome15 + View
Nelumbo nucifera Nn3g16503 chr3 - View
Olea europaea Oeu058776.2 chr10 - View
Prunus persica Prupe.3G304300 PTHR10285//PTHR10285:SF82 - URIDINE KINASE // SUBFAMILY NOT NAMED Pp03 + View
Populus trichocarpa Potri.001G332100 PTHR10285//PTHR10285:SF82 - URIDINE KINASE // SUBFAMILY NOT NAMED Chr01 - View
Quercus lobata QL02p071668 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr2g0175311 RcHm_v2.0_Chr2 + View
Salvia bowleyana SalBow4G2799 GWHASIU00000008 - View
Salvia bowleyana SalBow4G2777 GWHASIU00000008 + View
Salix brachista Sabra16G0213000 GWHAAZH00000016 - View
Simmondsia chinensis Sc03g0006620 GWHAASQ00000003 - View
Sechium edule Sed0006933 LG08 + View
Sechium edule Sed0024857 LG06 - View
Schrenkiella parvula Sp2g16320 PTHR10285//PTHR10285:SF82 - URIDINE KINASE // SUBFAMILY NOT NAMED ch2-4 - View
Schrenkiella parvula Sp7g01060 PTHR10285//PTHR10285:SF71 - URIDINE KINASE // URIDINE KINASE-LIKE PROTEIN 1, CHLOROPLASTIC-RELATED ch7-1 - View
Trochodendron aralioides TAR371G0909 group13 + View
Theobroma cacao Thecc.04G033900 Uridine kinase/uracil phosphoribosyltransferase 1 Chromosome_4 + View
Tarenaya hassleriana THA.LOC104805332 uridine kinase-like protein 1%2C chloroplastic NW_010961290.1 - View
Vaccinium macrocarpon vmacro05949 Similar to UKL1: Uridine kinase-like protein 1, chloroplastic (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01001805001 chr14 - View