Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold60G20972 scaffold60 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G6600 LG-11 + View
Acer truncatum Atru.chr12.82 chr12 + View
Actinidia chinensis Actinidia29712 Lachesis_group22 + View
Actinidia chinensis Actinidia00965 Lachesis_group3 - View
Actinidia chinensis Actinidia00666 Lachesis_group21 - View
Actinidia chinensis Actinidia33913 Lachesis_group3 - View
Arabidopsis lyrata AL6G15410 scaffold_6 + View
Arabidopsis lyrata AL3G22610 scaffold_3 + View
Avicennia marina MSTRG.8935 ScioBoG_11560_HRSCAF_11609 + View
Avicennia marina MSTRG.27311 ScioBoG_8578_HRSCAF_8617 + View
Amaranthus hybridus Ah.10g036320 Sorting and assembly machinery component 50 homolog (Transformation-related gene 3 protein) (TRG-3) AmaHy_arrow1_Scaffold_10 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.SQTL6G PTHR12815//PTHR12815:SF15 - SORTING AND ASSEMBLY MACHINERY SAM50 PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.G3A1I6 PTHR12815//PTHR12815:SF15 - SORTING AND ASSEMBLY MACHINERY SAM50 PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.17 + View
Arabidopsis thaliana AT5G05520 Outer membrane OMP85 family protein Outer membrane OMP85 family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%2C plastid%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184)%2C Surface antigen variable number (InterPro:IPR010827)%3B BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT3G11070.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT3G11070 Outer membrane OMP85 family protein Outer membrane OMP85 family protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: outer membrane%3B EXPRESSED IN: callus%3B CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184)%2C Surface antigen variable number (InterPro:IPR010827)%3B BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT5G05520.1)%3B Has 1600 Blast hits to 1598 proteins in 558 species: Archae - 0%3B Bacteria - 789%3B Metazoa - 142%3B Fungi - 132%3B Plants - 78%3B Viruses - 0%3B Other Eukaryotes - 459 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaC06g32264 ChrC06 + View
Brassica napus A10p30750 A10 - View
Brassica napus C09p71240 C09 - View
Brassica oleracea BolC5t34363H C5 - View
Brassica oleracea BolC9t59885H C9 - View
Brassica rapa BraA05t22612Z A05 - View
Brassica rapa BraA10t45116Z A10 - View
Beta vulgaris EL10Ac2g04875 K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) Chr2_EL10_PGA_scaffold6 - View
Camellia sinensis var. sinensis CSS0030356 PREDICTED: sorting and assembly machinery component 50 homolog B [Vitis vinifera] Chr7 - View
Cannabis sativa CANSAT56G1623 NC_044371.1 + View
Cicer arietinum L. Ca_15145_v3 Ca_LG5_v3 - View
Cicer arietinum L. Ca_05980_v3 Ca_LG2_v3 - View
Corylus avellana Haze_17258 Protein of unknown function 11 - View
Coffea canephora Cc02_g06150 Putative Sorting and assembly machinery component 50 homolog chr2 + View
Citrus clementina Ciclev10031211m.g scaffold_4 - View
Carpinus fangiana Cfa001291 Cfa01 + View
Cardamine hirsuta CARHR085650 Sorting and assembly machinery component-like protein Chr3 + View
Cardamine hirsuta CARHR207750 Sorting and assembly machinery component-like protein Chr6 - View
Carya illinoinensis CiPaw.02G194700 PTHR12815//PTHR12815:SF15 - SORTING AND ASSEMBLY MACHINERY SAM50 PROTEIN // SUBFAMILY NOT NAMED Chr02 - View
Carica papaya Cpa.g.sc19.146 supercontig_19 + View
Chenopodium quinoa AUR62022923 Samm50: Sorting and assembly machinery component 50 homolog C_Quinoa_Scaffold_3378 - View
Chenopodium quinoa AUR62012283 Samm50: Sorting and assembly machinery component 50 homolog C_Quinoa_Scaffold_1995 - View
Capsella rubella Carub.0006s0442 K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) scaffold_6 + View
Capsella rubella Carub.0003s1036 K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) scaffold_3 + View
Daucus carota DCAR_024813 hypothetical protein DCARv2_Chr7 + View
Daucus carota DCAR_011834 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv21759 GWHABJS00000004 + View
Davidia involucrata Dinv10598 GWHABJS00000009 - View
Durio zibethinus Duzib114G0409 NW_019167926.1 + View
Erigeron canadensis ECA238G0968 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.J00180 Chr10 + View
Erythranthe guttata Migut.F00656 scaffold_6 + View
Eutrema salsugineum Thhalv10020523m.g K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) scaffold_13 - View
Eutrema salsugineum Thhalv10013229m.g K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) scaffold_2 + View
Fragaria x ananassa FAN03G3165 PTHR12815//PTHR12815:SF15 - SORTING AND ASSEMBLY MACHINERY SAM50 PROTEIN // SUBFAMILY NOT NAMED Fvb7-3 + View
Fragaria x ananassa FAN06G2060 PTHR12815//PTHR12815:SF15 - SORTING AND ASSEMBLY MACHINERY SAM50 PROTEIN // SUBFAMILY NOT NAMED Fvb7-2 - View
Fragaria x ananassa FAN01G0548 PTHR12815//PTHR12815:SF15 - SORTING AND ASSEMBLY MACHINERY SAM50 PROTEIN // SUBFAMILY NOT NAMED Fvb7-4 + View
Fragaria x ananassa FAN10G0447 PTHR12815//PTHR12815:SF15 - SORTING AND ASSEMBLY MACHINERY SAM50 PROTEIN // SUBFAMILY NOT NAMED Fvb7-1 - View
Fragaria vesca FvH4_7g24890 PTHR12815//PTHR12815:SF15 - SORTING AND ASSEMBLY MACHINERY SAM50 PROTEIN // SUBFAMILY NOT NAMED Fvb7 - View
Gossypium hirsutum Gohir.D06G167900 K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) D06 + View
Gossypium hirsutum Gohir.A06G162400 K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) A06 + View
Glycine max Glyma.11G231800 K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) Gm11 - View
Glycine max Glyma.14G057500 K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) Gm14 + View
Glycine max Glyma.18G025400 K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) Gm18 + View
Gossypium raimondii Gorai.010G195800 Chr10 + View
Lupinus albus Lalb_Chr08g0231571 K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) Lalb_Chr08 + View
Lupinus albus Lalb_Chr11g0075031 K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) Lalb_Chr11 - View
Lupinus albus Lalb_Chr04g0250461 K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) Lalb_Chr04 + View
Lotus japonicus Lj6g0014357 PTHR12815//PTHR12815:SF15 - SORTING AND ASSEMBLY MACHINERY SAM50 PROTEIN // SUBFAMILY NOT NAMED chr6 + View
Lonicera japonica Lj8C63G9 GWHAAZE00000008 + View
Lactuca sativa Lsat_1_v5_gn_2_124241 Lsat_1_v8_lg_2 - View
Lactuca sativa Lsat_1_v5_gn_8_12801 K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) Lsat_1_v8_lg_8 + View
Malus domestica MD01G1156600 Outer membrane OMP85 family protein Chr01 - View
Malus domestica MD07G1225300 Outer membrane OMP85 family protein Chr07 - View
Manihot esculenta Manes.10G009900 Chromosome10 + View
Manihot esculenta Manes.07G132600 Chromosome07 - View
Medicago truncatula Medtr3g071450 outer membrane OMP85 family protein chr3 - View
Medicago truncatula Medtr5g083050 outer membrane OMP85 family protein chr5 - View
Petunia axillaris Peaxi162Scf00284g00618 Outer membrane OMP85 family protein Peaxi162Scf00284 + View
Punica granatum PGR044G2674 NC_045134.1 - View
Prunus persica Prupe.2G254100 Pp02 - View
Populus trichocarpa Potri.008G071800 PTHR12815//PTHR12815:SF15 - SORTING AND ASSEMBLY MACHINERY SAM50 PROTEIN // SUBFAMILY NOT NAMED Chr08 - View
Populus trichocarpa Potri.010G185600 PTHR12815//PTHR12815:SF15 - SORTING AND ASSEMBLY MACHINERY SAM50 PROTEIN // SUBFAMILY NOT NAMED Chr10 + View
Phaseolus vulgaris Phvul.008G222000 K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) Chr08 + View
Phaseolus vulgaris Phvul.001G245000 K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) Chr01 - View
Quercus lobata QL08p063564 8 - View
Rosa chinensis RcHm_v2.0_Chr1g0370771 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim03G0145600 chr03 - View
Rhododendron simsii Rhsim09G0179400 chr09 - View
Salvia bowleyana SalBow3G2537 GWHASIU00000006 + View
Salix brachista Sabra10G0142800 GWHAAZH00000010 + View
Salix brachista Sabra08G0053100 GWHAAZH00000008 - View
Simmondsia chinensis Sc11g0005230 GWHAASQ00000011 - View
Schrenkiella parvula Sp3g09400 K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) ch3-1 + View
Schrenkiella parvula Sp6g37330 K07277 - outer membrane protein insertion porin family (SAM50, TOB55, bamA) ch6-6 - View
Selenicereus undatus Hund15896 Scaffold_33677 + View
Trochodendron aralioides TAR636G2202 group1 + View
Trochodendron aralioides TAR369G0227 group18 + View
Theobroma cacao Thecc.10G012500 Outer membrane OMP85 family protein Chromosome_10 + View
Tarenaya hassleriana THA.LOC104816537 uncharacterized protein LOC104816537 NW_010965775.1 + View
Tarenaya hassleriana THA.LOC104826843 SAM50-like protein SPAC17C9.06 NW_010967707.1 + View
Trifolium pratense TPR.G38453 Tp57577_TGAC_v2_LG5 + View
Vaccinium macrocarpon vmacro06955 Similar to Samm50: Sorting and assembly machinery component 50 homolog (Mus musculus OX%3D10090) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro10022 Similar to samm50: Sorting and assembly machinery component 50 homolog (Xenopus tropicalis OX%3D8364) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0647G1501 CM024073.1 - View
Vigna mungo VMungo1383G3146 CM024070.1 - View
Vitis vinifera GSVIVG01032775001 chr13 - View