Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold11G05572 scaffold11 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G26840 LG-1 + View
Acer truncatum Atru.chr5.294 chr5 - View
Arabidopsis lyrata AL4G44430 scaffold_4 + View
Avicennia marina MSTRG.4898 ScioBoG_102838_HRSCAF_103081 + View
Arabidopsis thaliana AT2G45330 RNA 2'-phosphotransferase, Tpt1 / KptA family embryo defective 1067 (emb1067)%3B FUNCTIONS IN: tRNA 2'-phosphotransferase activity%2C transferase activity%2C transferring phosphorus-containing groups%3B INVOLVED IN: tRNA splicing%2C via endonucleolytic cleavage and ligation%2C embryo development ending in seed dormancy%3B EXPRESSED IN: male gametophyte%2C pollen tube%3B EXPRESSED DURING: L mature pollen stage%2C M germinated pollen stage%3B CONTAINS InterPro DOMAIN/s: Phosphotransferase KptA/Tpt1 (InterPro:IPR002745)%3B BEST Arabidopsis thaliana protein match is: RNA 2'-phosphotransferase%2C Tpt1 / KptA family (TAIR:AT5G23600.1)%3B Has 1059 Blast hits to 1053 proteins in 477 species: Archae - 87%3B Bacteria - 561%3B Metazoa - 92%3B Fungi - 143%3B Plants - 80%3B Viruses - 6%3B Other Eukaryotes - 90 (source: NCBI BLink). Chr2 + View
Brassica napus C04p06190 C04 + View
Brassica napus A04p33740 A04 + View
Brassica napus C04p71470 C04 + View
Brassica rapa BraA04t18836Z A04 + View
Beta vulgaris EL10Ac1g00881 2.7.1.160 - 2'-phosphotransferase / Yeast 2'-phosphotransferase Chr1_EL10_PGA_scaffold3 - View
Camellia sinensis var. sinensis CSS0007073 Putative tRNA 2'-phosphotransferase [Morus notabilis] Chr3 - View
Capsicum annuum CAN.G388.29 PGAv.1.6.scaffold388 + View
Corylus avellana Haze_16798 Protein of unknown function 11 - View
Coffea canephora Cc02_g24000 Putative tRNA 2'-phosphotransferase 1 chr2 + View
Ceratophyllum demersum CDE11G0696 9 + View
Ceratophyllum demersum CDE09G0478 7 - View
Cardamine hirsuta CARHR140540 tRNA 2'-phosphotransferase Chr4 + View
Chenopodium quinoa AUR62013643 SPAC2C4.12c: Putative tRNA 2'-phosphotransferase C_Quinoa_Scaffold_1412 + View
Chenopodium quinoa AUR62004205 SPAC2C4.12c: Putative tRNA 2'-phosphotransferase C_Quinoa_Scaffold_4250 - View
Capsella rubella Carub.0004s2796 2.7.1.160 - 2'-phosphotransferase / Yeast 2'-phosphotransferase scaffold_4 + View
Cucumis sativus L. CsaV3_3G009750 tRNA 2'-phosphotransferase 1 chr3 + View
Daucus carota DCAR_008556 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv43697 GWHABJS00000016 - View
Durio zibethinus Duzib138G1594 NW_019167893.1 - View
Erigeron canadensis ECA236G1357 Conyza_canadensis_scaffold:3 - View
Eucalyptus grandis Eucgr.D02463 Chr04 + View
Erythranthe guttata Migut.N01626 scaffold_14 - View
Fragaria x ananassa FAN10G4316 PF01885//PF03106 - RNA 2'-phosphotransferase, Tpt1 / KptA family (PTS_2-RNA) // WRKY DNA -binding domain (WRKY) Fvb7-1 - View
Fragaria x ananassa FAN10G0718 K10669 - 2'-phosphotransferase [EC:2.7.1.160] (TRPT1, TPT1) Fvb7-1 - View
Fragaria x ananassa FAN01G2913 2.7.1.160 - 2'-phosphotransferase / Yeast 2'-phosphotransferase Fvb7-4 + View
Gossypium hirsutum Gohir.D08G156200 K10669 - 2'-phosphotransferase [EC:2.7.1.160] (TRPT1, TPT1) D08 + View
Gossypium hirsutum Gohir.A08G135300 KOG2278 - RNA:NAD 2'-phosphotransferase TPT1 A08 + View
Gossypium raimondii Gorai.004G162500 Chr04 + View
Lupinus albus Lalb_Chr12g0208211 2.7.1.160 - 2'-phosphotransferase / Yeast 2'-phosphotransferase Lalb_Chr12 + View
Lonicera japonica Lj7C530G5 GWHAAZE00000007 + View
Lonicera japonica Lj9A568T64 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_7_9801 K10669 - 2'-phosphotransferase [EC:2.7.1.160] (TRPT1, TPT1) Lsat_1_v8_lg_7 + View
Manihot esculenta Manes.01G266500 Chromosome01 + View
Nicotiana tabacum Nitab4.5_0000457g0150 Phosphotransferase KptA/Tpt1 Nitab4.5_0000457 - View
Olea europaea Oeu064471.1 scaffold980 + View
Petunia axillaris Peaxi162Scf00013g03226 tRNA 2'-phosphotransferase 1 Peaxi162Scf00013 - View
Punica granatum PGR042G3567 NC_045130.1 - View
Prunus persica Prupe.2G143900 2.7.1.160 - 2'-phosphotransferase / Yeast 2'-phosphotransferase Pp02 - View
Phaseolus vulgaris Phvul.010G084500 Chr10 + View
Quercus lobata QL08p052672 8 + View
Rhododendron simsii Rhsim07G0028400 chr07 + View
Salvia bowleyana SalBow5G2038 GWHASIU00000003 + View
Salix brachista Sabra02G0114300 GWHAAZH00000002 - View
Simmondsia chinensis Sc23g0003640 GWHAASQ00000023 + View
Solanum lycopersicum Solyc01g091210.3 RNA 2'-phosphotransferase, Tpt1 / KptA family (AHRD V3.3 *** F4IW52_ARATH) SL4.0ch01 - View
Schrenkiella parvula Sp4g27360 K10669 - 2'-phosphotransferase [EC:2.7.1.160] (TRPT1, TPT1) ch4-6 + View
Solanum pennellii Sopen01g036960 embryo defective 1067 (emb1067) | FUNCTIONS IN: tRNA 2-phosphotransferase activity, transferase activity, transferring phosphorus-containing groups | INVOLVED IN: tRNA splicing, via endonucleolytic cleavage and ligation, embryo development ending in seed dormancy | EXPRESSED IN: male gametophyte, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Phosphotransferase KptA/Tpt1 | BEST Arabidopsis thaliana protein match is: RNA 2-phosphotransferase, Tpt1 / KptA family Spenn-ch01 - View
Solanum tuberosum PGSC0003DMG402025960 Conserved gene of unknown function ST4.03ch01 - View
Selenicereus undatus Hund17026 Scaffold_33675 + View
Theobroma cacao Thecc.01G378100 RNA 2'-phosphotransferase Chromosome_1 + View
Tripterygium wilfordii TWI23G0023 NC_052239.1 - View
Vaccinium macrocarpon vmacro13410 Similar to SPAC2C4.12c: Putative tRNA 2'-phosphotransferase (Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX%3D284812) chr7_Vaccinium_macrocarpon_Stevens_v1 + View