Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG9G16180 LG-9 + View
Acer truncatum Atru.chr11.1692 chr11 + View
Actinidia chinensis Actinidia32289 Lachesis_group4 - View
Actinidia chinensis Actinidia28632 Lachesis_group12 - View
Actinidia chinensis Actinidia01961 Lachesis_group11 + View
Arabidopsis lyrata AL2G28460 scaffold_2 + View
Arabidopsis lyrata AL5G13090 scaffold_5 + View
Avicennia marina MSTRG.3025 ScioBoG_102835_HRSCAF_103059 - View
Amaranthus hybridus Ah.10g031900 Pentatricopeptide repeat-containing protein At1g15510, chloroplastic (Protein EARLY CHLOROPLAST BIOGENESIS 2) (AtECB2) (Protein VANILLA CREAM 1) AmaHy_arrow1_Scaffold_10 - View
Arabidopsis thaliana AT5G39350 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: mitochondrion%3B EXPRESSED IN: shoot apex%2C embryo%2C sperm cell%2C flower%2C seed%3B EXPRESSED DURING: F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1)%3B Has 45149 Blast hits to 14161 proteins in 247 species: Archae - 1%3B Bacteria - 11%3B Metazoa - 167%3B Fungi - 118%3B Plants - 44194%3B Viruses - 0%3B Other Eukaryotes - 658 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT2G03380 Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G11290.1)%3B Has 46134 Blast hits to 13811 proteins in 252 species: Archae - 0%3B Bacteria - 9%3B Metazoa - 175%3B Fungi - 164%3B Plants - 45093%3B Viruses - 0%3B Other Eukaryotes - 693 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT1G69350 Tetratricopeptide repeat (TPR)-like superfamily protein Tetratricopeptide repeat (TPR)-like superfamily protein%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1)%3B Has 50942 Blast hits to 14152 proteins in 270 species: Archae - 0%3B Bacteria - 36%3B Metazoa - 125%3B Fungi - 175%3B Plants - 49809%3B Viruses - 0%3B Other Eukaryotes - 797 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC06g31185 ChrC06 - View
Brassica carinata BcaC06g34001 ChrC06 - View
Brassica napus C06p40570 C06 - View
Brassica napus C09p61750 C09 + View
Brassica oleracea BolC9t59013H C9 + View
Brassica rapa BraA10t44418Z A10 + View
Camellia sinensis var. sinensis CSS0016055 PREDICTED: pentatricopeptide repeat-containing protein At3g29230 [Vitis vinifera] Chr2 + View
Camellia sinensis var. sinensis CSS0009783 hypothetical protein POPTR_0004s12430g [Populus trichocarpa] Chr1 - View
Corylus avellana Haze_11935 Similar to PCMP-E66: Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc07_g03770 Pentatricopeptide repeat-containing protein At3g29230 chr7 + View
Citrus clementina Ciclev10033606m.g scaffold_4 + View
Carya illinoinensis CiPaw.04G014100 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr04 + View
Carya illinoinensis CiPaw.06G090000 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr06 - View
Carica papaya Cpa.g.sc1.84 supercontig_1 + View
Capsella rubella Carub.0005s0235 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_5 + View
Capsella rubella Carub.0002s1595 PF13041 - PPR repeat family (PPR_2) scaffold_2 + View
Daucus carota DCAR_011068 hypothetical protein DCARv2_Chr3 - View
Daucus carota DCAR_027448 hypothetical protein DCARv2_Chr8 + View
Davidia involucrata Dinv16704 GWHABJS00000018 + View
Davidia involucrata Dinv38764 GWHABJS00000019 - View
Durio zibethinus Duzib147G1399 NW_019168470.1 - View
Eucalyptus grandis Eucgr.B03180 Chr02 - View
Eutrema salsugineum Thhalv10005367m.g PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) scaffold_6 - View
Fragaria x ananassa FAN12G3073 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb4-3 + View
Fragaria x ananassa FAN07G1055 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb4-4 + View
Fragaria vesca FvH4_6g47760 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Fvb6 - View
Fragaria vesca FvH4_5g14600 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb5 - View
Fragaria vesca FvH4_4g30430 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb4 - View
Gossypium hirsutum Gohir.D04G045700 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) D04 - View
Gossypium hirsutum Gohir.D12G165700 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) D12 + View
Glycine max Glyma.02G113400 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm02 - View
Gossypium raimondii Gorai.012G050900 Chr12 - View
Hydrangea macrophylla Hma1.2p1_0357F.1_g134400 Hma1.2p1_0357F.1 + View
Lotus japonicus Lj2g0018360 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr2 - View
Lotus japonicus Lj1g0001862 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) chr1 - View
Lonicera japonica Lj3P1032T41 GWHAAZE00000003 - View
Lactuca sativa Lsat_1_v5_gn_2_88141 PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Lsat_1_v8_lg_2 + View
Medicago truncatula Medtr4g082470 PPR containing plant-like protein chr4 + View
Medicago truncatula Medtr5g042450 PPR containing plant-like protein chr5 - View
Nelumbo nucifera Nn4g23315 chr4 + View
Petunia axillaris Peaxi162Scf00451g00430 Pentatricopeptide repeat-containing protein Peaxi162Scf00451 - View
Petunia axillaris Peaxi162Scf00274g00006 Pentatricopeptide repeat-containing protein Peaxi162Scf00274 - View
Punica granatum PGR102G0545 NC_045129.1 + View
Prunus persica Prupe.1G281800 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Pp01 + View
Pisum sativum Psat1g070520 DYW family of nucleic acid deaminases chr1LG6 + View
Populus trichocarpa Potri.004G124400 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr04 + View
Populus trichocarpa Potri.008G092900 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr08 + View
Phaseolus vulgaris Phvul.002G081200 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Chr02 + View
Quercus lobata QL02p039290 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr2g0166911 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim08G0149800 chr08 - View
Salix brachista Sabra08G0069700 GWHAAZH00000008 + View
Simmondsia chinensis Sc11g0002180 GWHAASQ00000011 + View
Simmondsia chinensis Sc11g0004840 GWHAASQ00000011 - View
Solanum lycopersicum Solyc04g005460.1 Pentatricopeptide repeat (AHRD V3.3 *** A0A200QNY2_9MAGN) SL4.0ch04 - View
Solanum lycopersicum Solyc03g115570.1 Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A2I0WGW9_9ASPA) SL4.0ch03 - View
Schrenkiella parvula Sp2g17820 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) ch2-4 + View
Solanum pennellii Sopen03g034560 Encodes a chloroplast RNA editing factor. | ORGANELLE TRANSCRIPT PROCESSING 85 (OTP85) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch03 - View
Solanum pennellii Sopen02g033180 Tetratricopeptide repeat (TPR)-like superfamily protein | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein Spenn-ch02 + View
Solanum pennellii Sopen04g001480 Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing. | mitochondrial editing factor 21 (MEF21) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400002848 Pentatricopeptide repeat protein ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG400024657 Pentatricopeptide repeat-containing protein ST4.03ch03 - View
Selenicereus undatus Hund05859 Scaffold_19641 - View
Theobroma cacao Thecc.02G335100 Pentatricopeptide repeat-containing protein Chromosome_2 - View
Tarenaya hassleriana THA.LOC104822902 putative pentatricopeptide repeat-containing protein At1g69350%2C mitochondrial NW_010966822.1 + View
Trifolium pratense TPR.G12763 Tp57577_TGAC_v2_LG3 - View
Trifolium pratense TPR.G34047 Tp57577_TGAC_v2_LG2 - View
Tripterygium wilfordii TWI32G1038 NC_052254.1 + View
Vigna mungo VMungo1383G2689 CM024070.1 - View
Vigna mungo VMungo0464G1187 CM024077.1 - View