Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG1G930 | LG-1 | + | View | |
Arabidopsis lyrata | AL1G26030 | scaffold_1 | - | View | |
Avicennia marina | MSTRG.23924 | ScioBoG_3895_HRSCAF_3912 | - | View | |
Avicennia marina | MSTRG.715 | ScioBoG_102831_HRSCAF_103044 | + | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.ZBS8DW | PF04535 - Domain of unknown function (DUF588) (DUF588) | arahy.Tifrunner.gnm1.Arahy.13 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.RNL3CY | PF04535 - Domain of unknown function (DUF588) (DUF588) | arahy.Tifrunner.gnm1.Arahy.03 | + | View |
Arabidopsis thaliana | AT1G14160 | Uncharacterized protein family (UPF0497) Uncharacterised protein family (UPF0497)%3B CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497%2C trans-membrane plant (InterPro:IPR006702)%2C Uncharacterised protein family UPF0497%2C trans-membrane plant subgroup (InterPro:IPR006459)%3B BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) (TAIR:AT5G15290.1)%3B Has 565 Blast hits to 565 proteins in 21 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 565%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). | Chr1 | - | View |
Brassica carinata | BcaC07g41597 | ChrC07 | + | View | |
Brassica carinata | BcaB08g34372 | ChrB08 | - | View | |
Brassica napus | A09p62420 | A09 | + | View | |
Brassica napus | C08p45980 | C08 | + | View | |
Brassica oleracea | BolC8t52149H | C8 | + | View | |
Brassica rapa | BraA09t41606Z | A09 | + | View | |
Camellia sinensis var. sinensis | CSS0013184 | hypothetical protein MIMGU_mgv1a020210mg [Erythranthe guttata] | Chr2 | + | View |
Coffea canephora | Cc11_g12770 | CASP-like protein 1 | chr11 | - | View |
Cardamine hirsuta | CARHR014560 | CASP-like protein | Chr1 | - | View |
Carya illinoinensis | CiPaw.06G087000 | PF04535 - Domain of unknown function (DUF588) (DUF588) | Chr06 | + | View |
Citrullus lanatus | ClCG05G024120 | Casparian strip membrane protein 1 | CG_Chr05 | - | View |
Cucumis melo | MELO3C012113.2 | CASP-like protein | chr10 | - | View |
Cucumis sativus L. | CsaV3_5G032920 | CASP-like protein | chr5 | + | View |
Daucus carota | DCAR_011085 | hypothetical protein | DCARv2_Chr3 | - | View |
Durio zibethinus | Duzib251G0659 | NW_019167971.1 | - | View | |
Durio zibethinus | Duzib248G0567 | NW_019168048.1 | + | View | |
Eucalyptus grandis | Eucgr.G02489 | Chr07 | - | View | |
Eutrema salsugineum | Thhalv10008800m.g | PTHR11615:SF81 - CASPARIAN STRIP MEMBRANE PROTEIN 5 | scaffold_5 | + | View |
Fragaria x ananassa | FAN07G2691 | PF04535 - Domain of unknown function (DUF588) (DUF588) | Fvb4-4 | + | View |
Fragaria x ananassa | FAN12G2667 | PF04535 - Domain of unknown function (DUF588) (DUF588) | Fvb4-3 | + | View |
Gossypium hirsutum | Gohir.D12G167400 | PF04535 - Domain of unknown function (DUF588) (DUF588) | D12 | - | View |
Glycine max | Glyma.20G033700 | PTHR11615//PTHR11615:SF81 - NITRATE, FROMATE, IRON DEHYDROGENASE // CASPARIAN STRIP MEMBRANE PROTEIN 5 | Gm20 | - | View |
Glycine max | Glyma.01G050700 | PTHR11615//PTHR11615:SF81 - NITRATE, FROMATE, IRON DEHYDROGENASE // CASPARIAN STRIP MEMBRANE PROTEIN 5 | Gm01 | + | View |
Gossypium raimondii | Gorai.008G180300 | Chr08 | - | View | |
Hydrangea macrophylla | Hma1.2p1_0357F.1_g134140 | Hma1.2p1_0357F.1 | + | View | |
Lupinus albus | Lalb_Chr09g0329221 | PF04535 - Domain of unknown function (DUF588) (DUF588) | Lalb_Chr09 | - | View |
Lotus japonicus | Lj2g0008772 | PF04535 - Domain of unknown function (DUF588) (DUF588) | chr2 | + | View |
Lonicera japonica | Lj4A111G59 | GWHAAZE00000004 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_3_52001 | PTHR11615:SF81 - CASPARIAN STRIP MEMBRANE PROTEIN 5 | Lsat_1_v8_lg_3 | + | View |
Malus domestica | MD16G1070000 | Uncharacterised protein family (UPF0497) | Chr16 | - | View |
Manihot esculenta | Manes.05G104300 | Chromosome05 | + | View | |
Medicago truncatula | Medtr4g081880 | casparian strip membrane protein | chr4 | + | View |
Medicago truncatula | Medtr7g011090 | casparian strip membrane protein | chr7 | + | View |
Nicotiana tabacum | Nitab4.5_0000014g0090 | Uncharacterised protein family UPF0497, trans-membrane plant, Uncharacterised protein family UPF0497, trans-membrane plant subgroup | Nitab4.5_0000014 | + | View |
Punica granatum | PGR119G1798 | NC_045132.1 | - | View | |
Punica granatum | PGR004G1727 | NC_045131.1 | - | View | |
Phaseolus vulgaris | Phvul.003G045200 | PTHR11615:SF81 - CASPARIAN STRIP MEMBRANE PROTEIN 5 | Chr03 | + | View |
Quercus lobata | QL02p084608 | CM012294 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr4g0439491 | RcHm_v2.0_Chr4 | - | View | |
Simmondsia chinensis | Sc11g0002080 | GWHAASQ00000011 | + | View | |
Solanum lycopersicum | Solyc02g088160.4 | Casparian strip membrane protein 1 (AHRD V3.3 *-* CASP1_SOLTU) | SL4.0ch02 | + | View |
Schrenkiella parvula | Sp1g12500 | PF04535 - Domain of unknown function (DUF588) (DUF588) | ch1-1 | - | View |
Solanum pennellii | Sopen02g032850 | Uncharacterised protein family (UPF0497) | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant , Uncharacterised protein family UPF0497, trans-membrane plant subgroup | BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) | Spenn-ch02 | + | View |
Solanum pennellii | Sopen04g001660 | Uncharacterised protein family (UPF0497) | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant , Uncharacterised protein family UPF0497, trans-membrane plant subgroup | BEST Arabidopsis thaliana protein match is: Uncharacterised protein family (UPF0497) | Spenn-ch04 | - | View |
Solanum tuberosum | PGSC0003DMG400002855 | UPF0497 membrane protein 1 | ST4.03ch04 | - | View |
Trifolium pratense | TPR.G34034 | Tp57577_TGAC_v2_LG2 | - | View |