Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Acer truncatum | Atru.chr13.552 | chr13 | + | View | |
Actinidia chinensis | Actinidia15298 | Lachesis_group26 | + | View | |
Actinidia chinensis | Actinidia22568 | Lachesis_group28 | + | View | |
Actinidia chinensis | Actinidia12104 | Lachesis_group11 | - | View | |
Avicennia marina | MSTRG.2932 | ScioBoG_102835_HRSCAF_103059 | - | View | |
Avicennia marina | MSTRG.23819 | ScioBoG_3895_HRSCAF_3912 | - | View | |
Camellia sinensis var. sinensis | CSS0037682 | PREDICTED: E3 ubiquitin-protein ligase RNF185-like [Nelumbo nucifera] | Chr3 | + | View |
Cannabis sativa | CANSAT01G2622 | NC_044373.1 | - | View | |
Corylus avellana | Haze_15142 | Similar to RMA3: E3 ubiquitin-protein ligase RMA3 (Arabidopsis thaliana OX%3D3702) | 11 | + | View |
Coffea canephora | Cc02_g17910 | Putative RING/U-box superfamily protein | chr2 | + | View |
Coffea canephora | Cc07_g05160 | RING/U-box superfamily protein | chr7 | + | View |
Citrus clementina | Ciclev10026329m.g | scaffold_7 | + | View | |
Carya illinoinensis | CiPaw.02G014800 | PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED | Chr02 | - | View |
Carica papaya | Cpa.g.sc62.106 | supercontig_62 | - | View | |
Cucumis sativus L. | CsaV3_6G042520 | E3 ubiquitin-protein ligase RNF185 | chr6 | + | View |
Daucus carota | DCAR_022096 | hypothetical protein | DCARv2_Chr6 | + | View |
Davidia involucrata | Dinv42092 | GWHABJS00000002 | - | View | |
Davidia involucrata | Dinv23557 | GWHABJS00000005 | + | View | |
Durio zibethinus | Duzib187G1268 | NW_019167860.1 | - | View | |
Durio zibethinus | Duzib093G2241 | NW_019167937.1 | - | View | |
Durio zibethinus | Duzib147G1155 | NW_019168470.1 | - | View | |
Durio zibethinus | Duzib264G1018 | NW_019167960.1 | - | View | |
Erigeron canadensis | ECA240G1563 | Conyza_canadensis_scaffold:5 | - | View | |
Erythranthe guttata | Migut.B00269 | scaffold_2 | + | View | |
Erythranthe guttata | Migut.C00681 | scaffold_3 | - | View | |
Gossypium hirsutum | Gohir.D03G017500 | PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED | D03 | + | View |
Gossypium hirsutum | Gohir.A02G162800 | PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED | A02 | - | View |
Gossypium hirsutum | Gohir.A12G066200 | PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED | A12 | + | View |
Glycine max | Glyma.01G178600 | PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED | Gm01 | + | View |
Glycine max | Glyma.11G063500 | PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED | Gm11 | - | View |
Gossypium raimondii | Gorai.002G129700 | Chr02 | + | View | |
Gossypium raimondii | Gorai.003G017800 | Chr03 | + | View | |
Helianthus annuus | HanXRQChr08g0216561 | Putative zinc finger, RING/FYVE/PHD-type | HanXRQChr08 | - | View |
Hydrangea macrophylla | Hma1.2p1_0066F.1_g036780 | Hma1.2p1_0066F.1 | + | View | |
Lupinus albus | Lalb_Chr05g0213021 | PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED | Lalb_Chr05 | + | View |
Lupinus albus | Lalb_Chr14g0369041 | PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED | Lalb_Chr14 | - | View |
Lonicera japonica | Lj5P201T16 | GWHAAZE00000005 | + | View | |
Lactuca sativa | Lsat_1_v5_gn_3_93260 | KOG1493//KOG4172 - Anaphase-promoting complex (APC), subunit 11 // Predicted E3 ubiquitin ligase | Lsat_1_v8_lg_3 | - | View |
Malus domestica | MD10G1082400 | RING/U-box superfamily protein | Chr10 | + | View |
Malus domestica | MD05G1072100 | RING/U-box superfamily protein | Chr05 | - | View |
Manihot esculenta | Manes.13G135600 | Chromosome13 | - | View | |
Manihot esculenta | Manes.18G030200 | Chromosome18 | + | View | |
Medicago truncatula | Medtr1g021895 | zinc finger, C3HC4 type (RING finger) protein | chr1 | - | View |
Nicotiana tabacum | Nitab4.5_0004280g0150 | Zinc finger, RING-type, Zinc finger, RING-type, conserved site, Zinc finger, RING/FYVE/PHD-type | Nitab4.5_0004280 | - | View |
Punica granatum | PGR031G1985 | NC_045127.1 | + | View | |
Prunus persica | Prupe.8G105100 | PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED | Pp08 | + | View |
Populus trichocarpa | Potri.007G031600 | PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED | Chr07 | + | View |
Populus trichocarpa | Potri.014G040400 | PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED | Chr14 | - | View |
Populus trichocarpa | Potri.002G133000 | PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED | Chr02 | - | View |
Phaseolus vulgaris | Phvul.002G026100 | PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED | Chr02 | - | View |
Quercus lobata | QL02p007320 | CM012294 | - | View | |
Rhododendron simsii | Rhsim11G0173200 | chr11 | - | View | |
Salix brachista | Sabra07G0027400 | GWHAAZH00000007 | + | View | |
Salix brachista | Sabra14G0029500 | GWHAAZH00000014 | - | View | |
Simmondsia chinensis | Sc15g0006780 | GWHAASQ00000015 | - | View | |
Solanum lycopersicum | Solyc01g109340.4 | E3 ubiquitin-protein ligase (AHRD V3.3 *** A0A2G3D341_CAPCH) | SL4.0ch01 | - | View |
Solanum pennellii | Sopen10g022970 | RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein | Spenn-ch10 | - | View |
Solanum pennellii | Sopen01g051530 | RING/U-box superfamily protein | FUNCTIONS IN: zinc ion binding | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site , Zinc finger, RING-type , Zinc finger, C3HC4 RING-type | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein | Spenn-ch01 | - | View |
Solanum tuberosum | PGSC0003DMG400025183 | Rnf5 | ST4.03ch01 | - | View |
Trochodendron aralioides | TAR625G1459 | group4 | + | View | |
Tripterygium wilfordii | TWI12G0515 | NC_052243.1 | + | View | |
Vigna mungo | VMungo1215G2019 | CM024074.1 | - | View | |
Vitis vinifera | GSVIVG01031912001 | chr3 | - | View |