Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold53G19351 scaffold53 + View
SGA_v2.0_scaffold63G21651 scaffold63 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr11.1783 chr11 + View
Actinidia chinensis Actinidia33197 Lachesis_group12 + View
Arabidopsis lyrata AL5G12580 scaffold_5 - View
Arabidopsis lyrata AL1G26140 scaffold_1 + View
Avicennia marina MSTRG.2341 ScioBoG_102834_HRSCAF_103055 + View
Avicennia marina MSTRG.13423 ScioBoG_18778_HRSCAF_18863 - View
Avicennia marina MSTRG.700 ScioBoG_102831_HRSCAF_103044 - View
Avicennia marina MSTRG.7800 ScioBoG_102841_HRSCAF_103114 + View
Amaranthus hybridus Ah.02g113520 AmaHy_arrow1_Scaffold_2 - View
Amaranthus hybridus Ah.03g135060 AmaHy_arrow1_Scaffold_3 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WPKF6H PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.WI5JT9 PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6EG4FQ PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT2G02960 RING/FYVE/PHD zinc finger superfamily protein RING/FYVE/PHD zinc finger superfamily protein%3B FUNCTIONS IN: zinc ion binding%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3675 (InterPro:IPR022143)%2C Zinc finger%2C C3HC4 RING-type (InterPro:IPR018957)%2C Zinc finger%2C RING-CH-type (InterPro:IPR011016)%3B BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT1G14260.2)%3B Has 1768 Blast hits to 1768 proteins in 205 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 759%3B Fungi - 135%3B Plants - 605%3B Viruses - 31%3B Other Eukaryotes - 238 (source: NCBI BLink). Chr2 - View
Brassica napus C07p33590 C07 - View
Brassica oleracea BolC7t43868H C7 - View
Brassica oleracea BolC5t29956H C5 + View
Brassica rapa BraA06t24206Z A06 + View
Beta vulgaris EL10Ac6g13207 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Chr6_EL10_PGA_scaffold0 - View
Camellia sinensis var. sinensis CSS0049542 PREDICTED: uncharacterized protein LOC100250124 [Vitis vinifera] Chr2 + View
Camellia sinensis var. sinensis CSS0007034 membrane associated ring finger 1,8, putative [Ricinus communis] Chr6 - View
Camellia sinensis var. sinensis CSS0001249 PREDICTED: uncharacterized protein LOC104216961 isoform X3 [Nicotiana sylvestris] Chr12 + View
Corylus avellana Haze_12010 Similar to SUD1: Probable E3 ubiquitin ligase SUD1 (Arabidopsis thaliana OX%3D3702) 9 + View
Coffea canephora Cc11_g13000 RING/FYVE/PHD zinc finger superfamily protein chr11 + View
Citrus clementina Ciclev10012730m.g scaffold_6 - View
Citrus clementina Ciclev10032323m.g scaffold_4 - View
Ceratophyllum demersum CDE09G1098 7 + View
Cardamine hirsuta CARHR145360 Zinc finger family protein Chr5 - View
Carya illinoinensis CiPaw.05G135000 PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Chr05 + View
Carya illinoinensis CiPaw.06G085200 PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Chr06 - View
Citrullus lanatus ClCG05G024280 RING/FYVE/PHD zinc finger superfamily protein LENGTH=288 CG_Chr05 + View
Cucumis melo MELO3C012095.2 RING/FYVE/PHD zinc finger superfamily protein chr10 + View
Carica papaya Cpa.g.sc128.25 supercontig_128 - View
Chenopodium quinoa AUR62005790 march4: E3 ubiquitin-protein ligase MARCH4 C_Quinoa_Scaffold_1214 - View
Chenopodium quinoa AUR62028771 march4: E3 ubiquitin-protein ligase MARCH4 C_Quinoa_Scaffold_2837 + View
Capsella rubella Carub.0001s1394 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED scaffold_1 + View
Cucumis sativus L. CsaV3_5G032680 RING/FYVE/PHD zinc finger superfamily protein chr5 - View
Daucus carota DCAR_031023 hypothetical protein DCARv2_Chr9 + View
Daucus carota DCAR_007152 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv38713 GWHABJS00000019 + View
Davidia involucrata Dinv34154 GWHABJS00000008 + View
Davidia involucrata Dinv19963 GWHABJS00000006 + View
Durio zibethinus Duzib248G1097 NW_019168048.1 - View
Durio zibethinus Duzib251G0706 NW_019167971.1 + View
Durio zibethinus Duzib268G1471 NW_019168270.1 + View
Durio zibethinus Duzib205G1270 NW_019168381.1 - View
Eucalyptus grandis Eucgr.B03447 Chr02 + View
Erythranthe guttata Migut.E00087 scaffold_5 + View
Erythranthe guttata Migut.L01292 scaffold_12 + View
Eutrema salsugineum Thhalv10004698m.g PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED scaffold_6 + View
Fragaria x ananassa FAN04G0822 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb5-4 - View
Fragaria x ananassa FAN12G1916 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb4-3 - View
Fragaria x ananassa FAN22G0695 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb4-1 + View
Fragaria x ananassa FAN17G1748 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb4-2 - View
Fragaria vesca FvH4_5g14930 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb5 + View
Fragaria vesca FvH4_4g31340 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Fvb4 + View
Gossypium hirsutum Gohir.D12G168100 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED D12 + View
Gossypium hirsutum Gohir.D13G074900 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED D13 - View
Gossypium hirsutum Gohir.D02G125900 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED D02 - View
Gossypium hirsutum Gohir.A12G165000 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED A12 + View
Gossypium hirsutum Gohir.A03G101100 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED A03 - View
Gossypium hirsutum Gohir.A13G074700 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED A13 - View
Glycine max Glyma.02G107500 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Gm02 - View
Glycine max Glyma.01G047700 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Gm01 + View
Gossypium raimondii Gorai.008G181000 Chr08 + View
Gossypium raimondii Gorai.013G085600 Chr13 - View
Gossypium raimondii Gorai.005G141600 Chr05 - View
Hydrangea macrophylla Hma1.2p1_0265F.1_g106790 Hma1.2p1_0265F.1 - View
Hydrangea macrophylla Hma1.2p1_0795F.1_g218840 Hma1.2p1_0795F.1 - View
Lupinus albus Lalb_Chr17g0340671 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Lalb_Chr17 - View
Lupinus albus Lalb_Chr04g0256041 PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Lalb_Chr04 + View
Lupinus albus Lalb_Chr10g0098281 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Lalb_Chr10 - View
Lotus japonicus Lj2g0010702 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED chr2 - View
Lotus japonicus Lj1g0018114 PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED chr1 + View
Lonicera japonica Lj6C787T8 GWHAAZE00000006 + View
Lactuca sativa Lsat_1_v5_gn_3_52340 Lsat_1_v8_lg_3 - View
Magnolia biondii MBI02_g08836_MAGBIO AED:0.18 Chr02 + View
Magnolia biondii MBI05_g29536_MAGBIO AED:0.30 Chr05 + View
Malus domestica MD13G1072100 RING/FYVE/PHD zinc finger superfamily protein Chr13 + View
Malus domestica MD14G1200500 RING/FYVE/PHD zinc finger superfamily protein Chr14 - View
Malus domestica MD09G1051400 RING/FYVE/PHD zinc finger superfamily protein Chr09 - View
Malus domestica MD16G1072700 RING/FYVE/PHD zinc finger superfamily protein Chr16 + View
Manihot esculenta Manes.14G078200 Chromosome14 - View
Manihot esculenta Manes.05G101500 Chromosome05 - View
Medicago truncatula Medtr7g010610 RING-variant domain protein chr7 - View
Medicago truncatula Medtr5g040650 RING/FYVE/PHD zinc finger protein chr5 - View
Nelumbo nucifera Nn3g17243 chr3 - View
Olea europaea Oeu054875.1 chr6 + View
Oryza sativa ssp. japonica Os11g0600700 Similar to RING domain protein. chr11 + View
Punica granatum PGR083G0801 NC_045133.1 - View
Punica granatum PGR102G2380 NC_045129.1 - View
Prunus persica Prupe.1G274900 Pp01 - View
Prunus persica Prupe.5G193700 Pp05 - View
Pisum sativum Psat2g119880 RING-variant domain chr2LG1 + View
Papaver somniferum PSO478G4145 NC_039361.1 - View
Phaseolus vulgaris Phvul.002G085200 PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Chr02 + View
Rosa chinensis RcHm_v2.0_Chr4g0439841 RcHm_v2.0_Chr4 + View
Salvia bowleyana SalBow2G1210 GWHASIU00000007 + View
Simmondsia chinensis Sc04g0008120 GWHAASQ00000004 + View
Sechium edule Sed0020702 LG06 + View
Solanum lycopersicum Solyc05g007660.2 RING/FYVE/PHD zinc finger superfamily protein (AHRD V3.3 *** A0A2U1NXA0_ARTAN) SL4.0ch05 - View
Schrenkiella parvula Sp1g12610 PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED ch1-1 + View
Selenicereus undatus Hund05878 Scaffold_19641 + View
Selenicereus undatus Hund25234 Scaffold_3410 + View
Trochodendron aralioides TAR371G1289 group13 - View
Trochodendron aralioides TAR629G1384 group0 + View
Trochodendron aralioides TAR374G1382 group12 + View
Theobroma cacao Thecc.02G346000 RING/FYVE/PHD zinc finger superfamily protein Chromosome_2 + View
Theobroma cacao Thecc.04G082100 Unknown Chromosome_4 - View
Tarenaya hassleriana THA.LOC104822125 uncharacterized protein LOC104822125 NW_010966617.1 - View
Trifolium pratense TPR.G39179 Tp57577_TGAC_v2_LG3 - View
Vanilla planifolia HPP92_011248 RING/FYVE/PHD zinc finger superfamily protein *** CM028154.1 - View
Vitis vinifera GSVIVG01019978001 chr1 - View