Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold1G00396 scaffold1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G29250 LG-1 + View
Acer truncatum Atru.chr4.2791 chr4 - View
Actinidia chinensis Actinidia14311 Lachesis_group18 - View
Arabidopsis lyrata AL4G47430 scaffold_4 + View
Avicennia marina MSTRG.21605 ScioBoG_26769_HRSCAF_26899 - View
Avicennia marina MSTRG.10081 ScioBoG_12795_HRSCAF_12848 - View
Arabidopsis thaliana AT2G47850 Zinc finger C-x8-C-x5-C-x3-H type family protein Zinc finger C-x8-C-x5-C-x3-H type family protein%3B FUNCTIONS IN: zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%3B BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein (TAIR:AT5G18550.1)%3B Has 1724 Blast hits to 1003 proteins in 159 species: Archae - 0%3B Bacteria - 7%3B Metazoa - 368%3B Fungi - 218%3B Plants - 971%3B Viruses - 0%3B Other Eukaryotes - 160 (source: NCBI BLink). Chr2 + View
Brassica carinata BcaB02g08744 ChrB02 - View
Brassica napus C04p00080 C04 - View
Brassica napus A05p00160 A05 - View
Brassica rapa BraA05t19012Z A05 - View
Coffea canephora Cc03_g02100 Zinc finger CCCH domain-containing protein 32 chr3 + View
Coffea canephora Cc01_g20430 Zinc finger CCCH domain-containing protein 32 chr1 - View
Citrus clementina Ciclev10019968m.g scaffold_3 - View
Carpinus fangiana Cfa005997 Cfa02 + View
Cardamine hirsuta CARHR143250 Zinc finger CCCH domain-containing protein 32 Chr4 + View
Carya illinoinensis CiPaw.08G099400 PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 Chr08 + View
Carya illinoinensis CiPaw.07G102500 PTHR12506//PTHR12506:SF19 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 Chr07 - View
Cucumis melo MELO3C006627.2 zinc finger CCCH domain-containing protein 34 chr06 - View
Carica papaya Cpa.g.sc9.186 supercontig_9 - View
Capsella rubella Carub.0004s3056 PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 scaffold_4 + View
Cucumis sativus L. CsaV3_3G014330 zinc finger CCCH domain-containing protein 34 chr3 - View
Daucus carota DCAR_027092 hypothetical protein DCARv2_Chr8 - View
Daucus carota DCAR_002800 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv33013 GWHABJS00000010 - View
Durio zibethinus Duzib212G0724 NW_019168026.1 + View
Durio zibethinus Duzib052G0047 NW_019167849.1 - View
Erigeron canadensis ECA248G0940 Conyza_canadensis_scaffold:9 - View
Eucalyptus grandis Eucgr.H01196 Chr08 + View
Eutrema salsugineum Thhalv10001399m.g PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 scaffold_22 + View
Fragaria x ananassa FAN20G2496 PTHR12506//PTHR12506:SF19 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 Fvb2-3 + View
Fragaria vesca FvH4_2g24990 PTHR12506//PTHR12506:SF19 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 Fvb2 - View
Gossypium hirsutum Gohir.A08G073500 PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 A08 - View
Gossypium hirsutum Gohir.D12G009500 PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 D12 - View
Gossypium hirsutum Gohir.D02G052900 PTHR12506:SF27 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 34-RELATED D02 - View
Gossypium hirsutum Gohir.A12G009500 PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 A12 - View
Gossypium hirsutum Gohir.A02G047700 PTHR12506:SF27 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 34-RELATED A02 - View
Gossypium hirsutum Gohir.D08G053300 PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 D08 + View
Gossypium hirsutum Gohir.A10G162500 PTHR12506:SF27 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 34-RELATED A10 - View
Gossypium hirsutum Gohir.A08G043700 PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 A08 + View
Glycine max Glyma.10G020600 PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 Gm10 + View
Glycine max Glyma.02G153600 PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 Gm02 - View
Gossypium raimondii Gorai.005G058800 Chr05 - View
Gossypium raimondii Gorai.008G009500 Chr08 - View
Gossypium raimondii Gorai.004G053200 Chr04 + View
Lupinus albus Lalb_Chr18g0047311 PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 Lalb_Chr18 + View
Lotus japonicus Lj4g0003109 PTHR12506//PTHR12506:SF27 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 34-RELATED chr4 - View
Lotus japonicus Lj5g0005422 PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 chr5 - View
Lonicera japonica Lj1A36G48 GWHAAZE00000001 + View
Lonicera japonica Lj3A814G55 GWHAAZE00000003 - View
Lonicera japonica Lj2A1187G54 GWHAAZE00000002 - View
Malus domestica MD11G1301200 Zinc finger C-x8-C-x5-C-x3-H type family protein Chr11 - View
Manihot esculenta Manes.05G066400 Chromosome05 + View
Manihot esculenta Manes.03G192500 Chromosome03 - View
Manihot esculenta Manes.01G215400 Chromosome01 - View
Manihot esculenta Manes.15G014500 Chromosome15 + View
Olea europaea Oeu047468.1 chr20 - View
Petunia axillaris Peaxi162Scf00067g02114 Zinc finger CCCH domain-containing protein 32 Peaxi162Scf00067 + View
Punica granatum PGR119G1099 NC_045132.1 + View
Punica granatum PGR031G1639 NC_045127.1 - View
Prunus persica Prupe.8G254900 PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 Pp08 - View
Pisum sativum Psat6g167080 Zinc finger C-x8-C-x5-C-x3-H type (and similar) chr6LG2 + View
Salvia bowleyana SalBow3G4244 GWHASIU00000006 - View
Simmondsia chinensis Sc24g0003890 GWHAASQ00000024 + View
Solanum lycopersicum Solyc09g074640.3 Zinc finger transcription factor 54 SL4.0ch09 - View
Schrenkiella parvula Sp4g29780 PTHR12506//PTHR12506:SF19 - PROTEIN PHOSPHATASE RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 ch4-6 + View
Solanum pennellii Sopen09g029520 Zinc finger C-x8-C-x5-C-x3-H type family protein | FUNCTIONS IN: zinc ion binding, nucleic acid binding | INVOLVED IN: biological_process unknown | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type | BEST Arabidopsis thaliana protein match is: Zinc finger C-x8-C-x5-C-x3-H type family protein Spenn-ch09 - View
Selenicereus undatus Hund05395 Scaffold_19641 - View
Theobroma cacao Thecc.04G280600 Zinc finger C-x8-C-x5-C-x3-H type family protein Chromosome_4 - View
Theobroma cacao Thecc.01G293100 Zinc finger C-x8-C-x5-C-x3-H type family protein Chromosome_1 - View
Tarenaya hassleriana THA.LOC104817519 zinc finger CCCH domain-containing protein 32 isoform X1 NW_010965946.1 + View
Tripterygium wilfordii TWI59G1193 NC_052248.1 + View
Tripterygium wilfordii TWI14G0800 NC_052249.1 + View
Vaccinium macrocarpon vmacro15249 Similar to At2g47850: Zinc finger CCCH domain-containing protein 32 (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro02495 Similar to At2g47850: Zinc finger CCCH domain-containing protein 32 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View