Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold1G00378 scaffold1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G9450 LG-11 + View
Aethionema arabicum Aa31LG1G9660 LG-1 + View
Acer truncatum Atru.chr4.2834 chr4 + View
Acer truncatum Atru.chr5.1183 chr5 - View
Actinidia chinensis Actinidia24836 Lachesis_group15 - View
Arabidopsis lyrata AL4G29480 scaffold_4 + View
Arabidopsis lyrata AL3G16090 scaffold_3 + View
Arabidopsis lyrata AL7G39500 scaffold_7 - View
Arabidopsis lyrata AL1G12340 scaffold_1 - View
Arabidopsis lyrata AL6G39280 scaffold_6 - View
Avicennia marina MSTRG.18168 ScioBoG_22153_HRSCAF_22259 - View
Amaranthus hybridus Ah.06g189750 Rapid alkalinization factor (NtRALF) AmaHy_arrow1_Scaffold_6 + View
Aquilegia oxysepala Aqoxy2G02986 CHR02 - View
Aquilegia oxysepala Aqoxy5G00719 CHR05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.M5N13L PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED arahy.Tifrunner.gnm1.Arahy.06 - View
Arabidopsis thaliana AT3G05490 ralf-like 22 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF)%2C and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. ralf-like 22 (RALFL22)%3B CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801)%3B BEST Arabidopsis thaliana protein match is: ralf-like 33 (TAIR:AT4G15800.1)%3B Has 266 Blast hits to 266 proteins in 20 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 264%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr3 + View
Arabidopsis thaliana AT1G02900 rapid alkalinization factor 1 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF)%2C and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. Mediates Ca2+-dependent signaling. rapid alkalinization factor 1 (RALF1)%3B CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor (InterPro:IPR008801)%3B BEST Arabidopsis thaliana protein match is: ralf-like 33 (TAIR:AT4G15800.1)%3B Has 267 Blast hits to 267 proteins in 20 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 265%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaB03g15752 ChrB03 + View
Brassica carinata BcaC05g24574 ChrC05 - View
Brassica carinata BcaC05g30117 ChrC05 - View
Brassica napus C05p61740 C05 - View
Brassica napus C05p01560 C05 - View
Brassica napus A09p05400 A09 + View
Brassica napus A10p01560 A10 - View
Brassica oleracea BolC5t28935H C5 - View
Brassica rapa BraA09t36178Z A09 + View
Camellia sinensis var. sinensis CSS0048936 PREDICTED: rapid alkalinization factor [Prunus mume] Chr6 + View
Camellia sinensis var. sinensis CSS0034518 Ralf-like 33, putative [Theobroma cacao] Chr13 + View
Capsicum annuum CAN.G339.33 PGAv.1.6.scaffold339 - View
Cannabis sativa CANSAT25G0871 NC_044370.1 + View
Cicer arietinum L. Ca_10128_v3 Ca_LG4_v3 + View
Cicer arietinum L. Ca_09146_v3 Ca_LG3_v3 + View
Corylus avellana Haze_01205 Similar to RALFL33: Protein RALF-like 33 (Arabidopsis thaliana OX%3D3702) 1 - View
Coffea canephora Cc03_g01950 ralf-like 33 chr3 - View
Coffea canephora Cc01_g20640 ralf-like 33 chr1 + View
Citrus clementina Ciclev10006201m.g scaffold_9 - View
Citrus clementina Ciclev10002897m.g scaffold_5 + View
Citrus clementina Ciclev10023750m.g scaffold_3 + View
Ceratophyllum demersum CDE01G0653 11 + View
Carpinus fangiana Cfa005951 Cfa02 - View
Carpinus fangiana Cfa006625 Cfa02 + View
Cardamine hirsuta CARHR079880 Rapid alkalinization factor 1 Chr3 + View
Cardamine hirsuta CARHR290300 rapid alkalinization factor 23 NSCAFB.163 + View
Cardamine hirsuta CARHR002250 rapid alkalinization factor 1 Chr1 - View
Carya illinoinensis CiPaw.08G097500 PF05498 - Rapid ALkalinization Factor (RALF) (RALF) Chr08 - View
Carya illinoinensis CiPaw.07G106300 PF05498 - Rapid ALkalinization Factor (RALF) (RALF) Chr07 + View
Carya illinoinensis CiPaw.07G021200 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Chr07 + View
Citrullus lanatus ClCG09G006060 Rapid alkalinization factor 2 CG_Chr09 - View
Cucumis melo MELO3C016020.2 Rapid alkalinization factor chr01 - View
Carica papaya Cpa.g.sc48.92 supercontig_48 + View
Carica papaya Cpa.g.sc9.207 supercontig_9 + View
Chenopodium quinoa AUR62000768 RALF1: Protein RALF-like 1 C_Quinoa_Scaffold_2088 - View
Chenopodium quinoa AUR62008615 RALFL33: Protein RALF-like 33 C_Quinoa_Scaffold_1710 + View
Chenopodium quinoa AUR62033167 RALFL33: Protein RALF-like 33 C_Quinoa_Scaffold_2244 + View
Capsella rubella Carub.0004s1542 PTHR33136:SF9 - PROTEIN RALF-LIKE 4 scaffold_4 + View
Capsella rubella Carub.0001s0203 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED scaffold_1 - View
Capsella rubella Carub.0006s2487 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED scaffold_6 - View
Capsella rubella Carub.0003s0478 PTHR33136//PTHR33136:SF13 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 22 scaffold_3 + View
Daucus carota DCAR_002812 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_005807 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv19718 GWHABJS00000007 - View
Davidia involucrata Dinv40341 GWHABJS00000005 + View
Durio zibethinus Duzib128G0017 NW_019168481.1 - View
Durio zibethinus Duzib138G0285 NW_019167893.1 - View
Durio zibethinus Duzib177G0542 NW_019168004.1 + View
Durio zibethinus Duzib212G0565 NW_019168026.1 - View
Durio zibethinus Duzib052G0676 NW_019167849.1 + View
Durio zibethinus Duzib211G0580 NW_019168049.1 + View
Erigeron canadensis ECA236G3542 Conyza_canadensis_scaffold:3 + View
Eucalyptus grandis Eucgr.H01161 Chr08 - View
Eucalyptus grandis Eucgr.K03464 Chr11 + View
Erythranthe guttata Migut.D00195 scaffold_4 + View
Erythranthe guttata Migut.N01498 scaffold_14 + View
Eutrema salsugineum Thhalv10021783m.g PTHR33136:SF13 - PROTEIN RALF-LIKE 22 scaffold_13 - View
Eutrema salsugineum Thhalv10009124m.g PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED scaffold_5 + View
Fragaria x ananassa FAN20G0886 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Fvb2-3 - View
Fragaria x ananassa FAN24G3138 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Fvb2-2 - View
Fragaria x ananassa FAN27G0851 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Fvb2-1 - View
Fragaria vesca FvH4_2g25351 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Fvb2 + View
Gossypium hirsutum Gohir.D08G052800 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED D08 - View
Gossypium hirsutum Gohir.D11G277700 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED D11 + View
Gossypium hirsutum Gohir.A08G043000 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED A08 - View
Gossypium hirsutum Gohir.A11G115300 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED A11 - View
Gossypium hirsutum Gohir.A11G267800 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED A11 + View
Gossypium hirsutum Gohir.D02G054300 PTHR33136//PTHR33136:SF13 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 22 D02 + View
Gossypium hirsutum Gohir.D08G138501 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED D08 + View
Gossypium hirsutum Gohir.A08G117550 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED A08 + View
Gossypium hirsutum Gohir.D11G120300 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED D11 - View
Gossypium hirsutum Gohir.A10G163900 PTHR33136//PTHR33136:SF13 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 22 A10 + View
Gossypium hirsutum Gohir.A02G049200 PTHR33136//PTHR33136:SF13 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 22 A02 + View
Glycine max Glyma.20G236400 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Gm20 + View
Glycine max Glyma.10G152000 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Gm10 - View
Glycine max Glyma.03G236000 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Gm03 - View
Glycine max Glyma.19G209900 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Gm19 + View
Glycine max Glyma.19G233700 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Gm19 - View
Glycine max Glyma.03G213000 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Gm03 + View
Gossypium raimondii Gorai.004G052800 Chr04 - View
Gossypium raimondii Gorai.007G299900 Chr07 + View
Gossypium raimondii Gorai.004G142100 Chr04 + View
Gossypium raimondii Gorai.005G060200 Chr05 + View
Gossypium raimondii Gorai.007G129000 Chr07 - View
Helianthus annuus HanXRQChr06g0163881 Probable ralf-like 22 HanXRQChr06 - View
Hydrangea macrophylla Hma1.2p1_0209F.1_g088620 Hma1.2p1_0209F.1 - View
Lupinus albus Lalb_Chr18g0047141 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Lalb_Chr18 - View
Lotus japonicus Lj5g0010157 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED chr5 - View
Lotus japonicus Lj1g0013033 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED chr1 + View
Lotus japonicus Lj4g0026721 PTHR33136:SF13 - PROTEIN RALF-LIKE 22 chr4 + View
Lactuca sativa Lsat_1_v5_gn_5_190460 Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_8_53380 Lsat_1_v8_lg_8 - View
Magnolia biondii MBI18_g21828_MAGBIO AED:0.03 Chr18 - View
Malus domestica MD12G1213600 ralf-like 33 Chr12 - View
Malus domestica MD11G1304400 ralf-like 33 Chr11 + View
Malus domestica MD16G1169200 ralf-like 33 Chr16 - View
Manihot esculenta Manes.05G064300 Chromosome05 - View
Manihot esculenta Manes.01G217000 Chromosome01 + View
Manihot esculenta Manes.09G169900 Chromosome09 + View
Manihot esculenta Manes.03G194800 Chromosome03 + View
Medicago truncatula Medtr7g108600 RALF chr7 + View
Olea europaea Oeu048347.1 chr1 - View
Petunia axillaris Peaxi162Scf00067g00252 RALFL33, putative Peaxi162Scf00067 + View
Petunia axillaris Peaxi162Scf00071g00616 Rapid alkalinization factor Peaxi162Scf00071 + View
Punica granatum PGR044G1871 NC_045134.1 + View
Punica granatum PGR031G3251 NC_045127.1 + View
Punica granatum PGR119G0509 NC_045132.1 + View
Prunus persica Prupe.8G258000 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Pp08 + View
Populus trichocarpa Potri.005G025800 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED Chr05 - View
Populus trichocarpa Potri.014G131800 PF05498 - Rapid ALkalinization Factor (RALF) (RALF) Chr14 - View
Phaseolus vulgaris Phvul.001G205701 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Chr01 + View
Phaseolus vulgaris Phvul.007G197000 PTHR33136:SF5 - PROTEIN RALF-LIKE 1-RELATED Chr07 + View
Quercus lobata QL12p027130 12 + View
Rhododendron simsii Rhsim13G0012600 chr13 - View
Rhododendron simsii Rhsim01G0283800 chr01 + View
Salvia bowleyana SalBow3G0941 GWHASIU00000006 + View
Salix brachista Sabra13G0016400 GWHAAZH00000013 - View
Salix brachista Sabra14G0098000 GWHAAZH00000014 - View
Simmondsia chinensis Sc05g0004210 GWHAASQ00000005 - View
Sechium edule Sed0012753 LG07 - View
Sechium edule Sed0013472 LG05 - View
Solanum lycopersicum Solyc09g074890.1 Rapid ALkalinization Factor (AHRD V3.3 *** A0A200QWN9_9MAGN) SL4.0ch09 + View
Schrenkiella parvula Sp1g01900 PTHR33136//PTHR33136:SF5 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 1-RELATED ch1-1 - View
Schrenkiella parvula Sp2g20870 PTHR33136//PTHR33136:SF13 - FAMILY NOT NAMED // PROTEIN RALF-LIKE 22 ch2-4 + View
Schrenkiella parvula Sp3g04320 PTHR33136:SF13 - PROTEIN RALF-LIKE 22 ch3-1 + View
Solanum pennellii Sopen09g029710 Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. | ralf-like 33 (RALFL33) | CONTAINS InterPro DOMAIN/s: Rapid ALkalinization Factor | BEST Arabidopsis thaliana protein match is: rapid alkalinization factor 23 Spenn-ch09 + View
Solanum tuberosum PGSC0003DMG400011369 Rapid alkalinization factor preproprotein ST4.03ch09 + View
Trochodendron aralioides TAR636G0737 group1 - View
Trochodendron aralioides TAR633G1015 group2 + View
Trochodendron aralioides TAR362G0455 group17 - View
Trochodendron aralioides TAR365G0715 group16 - View
Theobroma cacao Thecc.01G297000 Ralf-like 33 Chromosome_1 + View
Theobroma cacao Thecc.05G312600 Rapid alkalinization factor 1 Chromosome_5 + View
Theobroma cacao Thecc.04G284500 Rapid alkalinization factor 1 Chromosome_4 + View
Tarenaya hassleriana THA.LOC104801268 protein RALF-like 1 NW_010969548.1 + View
Tarenaya hassleriana THA.LOC104818714 protein RALF-like 22 NW_010966177.1 + View
Trifolium pratense TPR.G9615 Tp57577_TGAC_v2_LG6 - View
Tripterygium wilfordii TWI09G0853 NC_052245.1 + View
Tripterygium wilfordii TWI14G0362 NC_052249.1 - View
Vaccinium macrocarpon vmacro02469 Similar to RALFL33: Protein RALF-like 33 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G1911 CM024070.1 + View
Vitis vinifera GSVIVG01031147001 chr14 - View
Vitis vinifera GSVIVG01027973001 chr7 + View