Home
Dicots PLAZA 5.0
Data
Data
Overview
Query builder
Files
Download
Analyze
Gene Families
Expansion plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/Interpro description
Gene family
Login
Account
Profile settings
Password
Logout
SGA_v2.0_scaffold2G01357
Gene toolbox
View
Sequences
BLAST Hits
Orthologs
Colinear Genes Pairs
Genome Browser
Homology related tools
Local Gene Organization
Multiple Sequence Alignment
Phylogenetic Tree
Similarity Heatmap
Create
Custom Phylogenetic Tree
Paralogs (intra-species colinear regions)
Gene id
Description
Chromosome
Strand
Multiplicon
SGA_v2.0_scaffold47G17786
scaffold47
+
View
Orthologs (inter-species colinear regions)
Organism
Gene id
Description
Chromosome
Strand
Multiplicon
Aethionema arabicum
Aa31LG11G9860
LG-11
+
View
Arabidopsis lyrata
AL7G12220
scaffold_7
+
View
Arabidopsis lyrata
AL4G30340
scaffold_4
+
View
Avicennia marina
MSTRG.4565
ScioBoG_102837_HRSCAF_103074
+
View
Avicennia marina
MSTRG.8133
ScioBoG_102841_HRSCAF_103114
-
View
Cannabis sativa
CANSAT25G3662
NC_044370.1
+
View
Citrus clementina
Ciclev10018175m.g
scaffold_2
+
View
Ceratophyllum demersum
CDE05G1123
3
-
View
Carica papaya
Cpa.g.sc53.107
supercontig_53
+
View
Capsella rubella
Carub.0004s1604
PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase)
scaffold_4
+
View
Erythranthe guttata
Migut.F01718
scaffold_6
-
View
Populus trichocarpa
Potri.011G052300
PF13041//PF14432 - PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase)
Chr11
+
View
Quercus lobata
QL03p019094
3
-
View
Rosa chinensis
RcHm_v2.0_Chr4g0424401
RcHm_v2.0_Chr4
+
View
Salvia bowleyana
SalBow6G2474
GWHASIU00000002
-
View
Simmondsia chinensis
Sc13g0002940
GWHAASQ00000013
+
View
Simmondsia chinensis
Sc25g0004700
GWHAASQ00000025
+
View
Sechium edule
Sed0004068
LG05
+
View
Sechium edule
Sed0017483
LG04
+
View
Tarenaya hassleriana
THA.LOC104807686
pentatricopeptide repeat-containing protein At4g39952%2C mitochondrial
NW_010963495.1
-
View
Trifolium pratense
TPR.G14783
Tp57577_TGAC_v2_LG1
-
View
Trifolium pratense
TPR.G1972
Tp57577_TGAC_v2_LG1
+
View
Tripterygium wilfordii
TWI59G1159
NC_052248.1
+
View