Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold47G17731 scaffold47 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G17100 LG-3 + View
Actinidia chinensis Actinidia33370 Lachesis_group25 - View
Arabidopsis lyrata AL6G20480 scaffold_6 - View
Avicennia marina MSTRG.23319 ScioBoG_3895_HRSCAF_3912 - View
Avicennia marina MSTRG.2543 ScioBoG_102835_HRSCAF_103059 - View
Aquilegia oxysepala Aqoxy6G00510 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6K442L PTHR22952//PTHR22952:SF180 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // TRANSCRIPTION FACTOR TGA1-RELATED arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.RIV6ZB PTHR22952//PTHR22952:SF180 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // TRANSCRIPTION FACTOR TGA1-RELATED arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT5G10030 TGACG motif-binding factor 4 Encodes a member of basic leucine zipper transcription gene family. Nomenclature according to Xiang%2C et al. (1997). TGACG motif-binding factor 4 (TGA4)%3B FUNCTIONS IN: calmodulin binding%2C DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: response to cold%2C defense response to bacterium%3B LOCATED IN: nucleus%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827)%2C bZIP transcription factor%2C bZIP-1 (InterPro:IPR011616)%3B BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G65210.5)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). TGACG motif-binding factor 4 (TGA4)%3B CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827)%2C bZIP transcription factor%2C bZIP-1 (InterPro:IPR011616)%3B BEST Arabidopsis thaliana protein match is: bZIP transcription factor family protein (TAIR:AT5G65210.5). Chr5 - View
Amborella trichopoda ATR0564G466 AmTr_v1.0_scaffold00010 + View
Brassica napus C09p67530 C09 + View
Brassica napus A10p27460 A10 + View
Brassica oleracea BolC9t59513H C9 + View
Brassica rapa BraA10t44798Z A10 + View
Camellia sinensis var. sinensis CSS0026039 BZIP transcription factor family protein isoform 1 [Theobroma cacao] Chr1 + View
Cicer arietinum L. Ca_17705_v3 Ca_LG6_v3 - View
Corylus avellana Haze_25010 Similar to TGA1: Transcription factor TGA1 (Arabidopsis thaliana OX%3D3702) 8 + View
Coffea canephora Cc07_g15790 TGACG-sequence-specific DNA-binding protein TGA-1A chr7 + View
Citrus clementina Ciclev10025940m.g scaffold_7 - View
Carpinus fangiana Cfa002728 Cfa01 + View
Cardamine hirsuta CARHR203280 bZIP transcription factor family protein Chr6 + View
Carya illinoinensis CiPaw.03G136800 PTHR22952//PTHR22952:SF180 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // TRANSCRIPTION FACTOR TGA1-RELATED Chr03 - View
Carya illinoinensis CiPaw.04G094400 PTHR22952//PTHR22952:SF180 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // TRANSCRIPTION FACTOR TGA1-RELATED Chr04 - View
Chenopodium quinoa AUR62003749 TGA4: Transcription factor TGA4 C_Quinoa_Scaffold_2370 - View
Capsella rubella Carub.0006s0849 PTHR22952//PTHR22952:SF180 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // TRANSCRIPTION FACTOR TGA1-RELATED scaffold_6 - View
Daucus carota DCAR_014251 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv21967 GWHABJS00000021 + View
Davidia involucrata Dinv44722 GWHABJS00000002 - View
Durio zibethinus Duzib187G1175 NW_019167860.1 + View
Durio zibethinus Duzib264G0583 NW_019167960.1 - View
Eucalyptus grandis Eucgr.H04824 Chr08 + View
Erythranthe guttata Migut.L00088 scaffold_12 - View
Erythranthe guttata Migut.H02410 scaffold_8 + View
Eutrema salsugineum Thhalv10013890m.g PTHR22952:SF180 - TRANSCRIPTION FACTOR TGA1-RELATED scaffold_2 - View
Fragaria x ananassa FAN19G1028 PTHR22952:SF180 - TRANSCRIPTION FACTOR TGA1-RELATED Fvb1-4 + View
Fragaria x ananassa FAN23G0095 PTHR22952:SF180 - TRANSCRIPTION FACTOR TGA1-RELATED Fvb1-3 + View
Fragaria vesca FvH4_1g21900 PTHR22952//PTHR22952:SF180 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // TRANSCRIPTION FACTOR TGA1-RELATED Fvb1 + View
Gossypium hirsutum Gohir.A11G197200 PTHR22952//PTHR22952:SF180 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // TRANSCRIPTION FACTOR TGA1-RELATED A11 - View
Gossypium hirsutum Gohir.A10G086300 PTHR22952//PTHR22952:SF180 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // TRANSCRIPTION FACTOR TGA1-RELATED A10 + View
Glycine max Glyma.18G020900 PTHR22952//PTHR22952:SF180 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // TRANSCRIPTION FACTOR TGA1-RELATED Gm18 + View
Glycine max Glyma.08G140100 PTHR22952//PTHR22952:SF172 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Gm08 + View
Glycine max Glyma.11G236300 PTHR22952//PTHR22952:SF180 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // TRANSCRIPTION FACTOR TGA1-RELATED Gm11 - View
Glycine max Glyma.05G182500 PTHR22952//PTHR22952:SF172 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Gm05 + View
Gossypium raimondii Gorai.008G102300 Chr08 - View
Lonicera japonica Lj2C560G2 GWHAAZE00000002 + View
Lonicera japonica Lj4A879T67 GWHAAZE00000004 - View
Magnolia biondii MBI02_g13006_MAGBIO AED:0.24 Chr02 + View
Malus domestica MD01G1021600 TGACG motif-binding factor 4 Chr01 - View
Malus domestica MD15G1330400 TGACG motif-binding factor 4 Chr15 + View
Manihot esculenta Manes.12G140100 Chromosome12 + View
Manihot esculenta Manes.13G089700 Chromosome13 + View
Medicago truncatula Medtr8g091650 BZIP family transcription factor chr8 + View
Medicago truncatula Medtr3g087940 BZIP family transcription factor chr3 + View
Nelumbo nucifera Nn1g05226 chr1 - View
Nelumbo nucifera Nn5g28956 chr5 - View
Punica granatum PGR004G1178 NC_045131.1 - View
Punica granatum PGR102G0463 NC_045129.1 + View
Papaver somniferum PSO447G0140 NW_020621936.1 - View
Papaver somniferum PSO210G2007 NC_039359.1 - View
Populus trichocarpa Potri.007G085700 PTHR22952//PTHR22952:SF188 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Chr07 - View
Populus trichocarpa Potri.005G082000 PTHR22952//PTHR22952:SF188 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Chr05 + View
Phaseolus vulgaris Phvul.001G249300 PTHR22952:SF180 - TRANSCRIPTION FACTOR TGA1-RELATED Chr01 - View
Phaseolus vulgaris Phvul.002G263400 PTHR22952//PTHR22952:SF172 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Chr02 + View
Quercus lobata QL06p033275 6 + View
Rhododendron simsii Rhsim10G0154600 chr10 - View
Salvia bowleyana SalBow3G2529 GWHASIU00000006 + View
Salix brachista Sabra05G0067100 GWHAAZH00000005 - View
Salix brachista Sabra07G0070800 GWHAAZH00000007 - View
Simmondsia chinensis Sc25g0005150 GWHAASQ00000025 + View
Solanum lycopersicum Solyc04g054320.4 leucine-zipper transcription factor SL4.0ch04 - View
Schrenkiella parvula Sp6g33370 PTHR22952//PTHR22952:SF180 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // TRANSCRIPTION FACTOR TGA1-RELATED ch6-6 + View
Solanum pennellii Sopen04g023900 TGACG-sequence-specific DNA-binding protein TGA-1A (TGA1a) (ASF-1 protein) - Nicotiana tabacum (Common tobacco), Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated. | TGA1 | CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor , bZIP transcription factor, bZIP-1 | BEST Arabidopsis thaliana protein match is: TGACG motif-binding factor 4 Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400012792 Leucine zipper transcription factor ST4.03ch04 + View
Selenicereus undatus Hund13653 Scaffold_33679 + View
Trochodendron aralioides TAR381G0657 group11 + View
Trochodendron aralioides TAR625G1330 group4 - View
Trochodendron aralioides TAR628G0829 group5 - View
Theobroma cacao Thecc.01G109800 BZIP transcription factor family protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104799164 transcription factor TGA1-like isoform X1 NW_010960188.1 + View
Trifolium pratense TPR.G2247 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI53G0696 NC_052244.1 - View
Tripterygium wilfordii TWI74G1035 NC_052234.1 + View
Vaccinium macrocarpon vmacro12925 Similar to TGA1: Transcription factor TGA1 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro18622 Similar to TGA1: Transcription factor TGA1 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G3544 CM024069.1 + View
Vitis vinifera GSVIVG01022200001 chr7 + View