Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold51G18757 scaffold51 - View
SGA_v2.0_scaffold47G17704 scaffold47 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G17190 LG-3 - View
Acer truncatum Atru.chr4.346 chr4 + View
Actinidia chinensis Actinidia33358 Lachesis_group25 + View
Arabidopsis lyrata AL6G20380 scaffold_6 + View
Arabidopsis lyrata AL8G42330 scaffold_8 + View
Avicennia marina MSTRG.2528 ScioBoG_102835_HRSCAF_103059 + View
Aquilegia oxysepala Aqoxy6G00467 CHR06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CBHP4D arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A4AUQP arahy.Tifrunner.gnm1.Arahy.10 - View
Arabidopsis thaliana AT5G09960 sorbin/SH3 domain protein FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4%2C defence response (InterPro:IPR008700)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64850.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT5G64850 sorbin/SH3 domain protein FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4%2C defence response (InterPro:IPR008700)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09960.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 + View
Brassica carinata BcaB07g29762 ChrB07 + View
Brassica carinata BcaC03g18283 ChrC03 + View
Brassica carinata BcaB04g19997 ChrB04 + View
Brassica carinata BcaB02g09835 ChrB02 + View
Brassica carinata BcaC04g23276 ChrC04 - View
Brassica napus C02p63620 C02 + View
Brassica napus A10p27540 A10 - View
Brassica napus A09p08870 A09 + View
Brassica napus C09p67610 C09 - View
Brassica napus A02p43530 A02 + View
Brassica oleracea BolC2t12428H C2 + View
Brassica oleracea BolC9t53929H C9 + View
Brassica rapa BraA10t44806Z A10 - View
Brassica rapa BraA02t09281Z A02 + View
Brassica rapa BraA09t36538Z A09 + View
Beta vulgaris EL10Ac6g14757 Chr6_EL10_PGA_scaffold0 - View
Cannabis sativa CANSAT01G0734 NC_044373.1 + View
Corylus avellana Haze_25049 Protein of unknown function 8 - View
Coffea canephora Cc07_g16300 FUNCTIONS IN chr7 - View
Citrus clementina Ciclev10026820m.g scaffold_7 + View
Ceratophyllum demersum CDE05G1218 3 - View
Cardamine hirsuta CARHR278860 FUNCTIONS IN: molecular_function unknown Chr8 + View
Cardamine hirsuta CARHR203370 FUNCTIONS IN: molecular_function unknown Chr6 - View
Carya illinoinensis CiPaw.04G091400 Chr04 + View
Carya illinoinensis CiPaw.03G134100 Chr03 + View
Citrullus lanatus ClCG02G001020 RPM1-interacting protein 4 (RIN4) family protein CG_Chr02 + View
Citrullus lanatus ClCG01G016140 RPM1-interacting protein 4 (RIN4) family protein CG_Chr01 + View
Cucumis melo MELO3C007484.2 RPM1-interacting protein 4 (RIN4) family protein chr08 + View
Cucumis melo MELO3C020960.2 RPM1-interacting protein 4 (RIN4) family protein chr11 + View
Capsella rubella Carub.0006s0840 PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) scaffold_6 + View
Capsella rubella Carub.0008s2568 PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) scaffold_8 + View
Cucumis sativus L. CsaV3_6G042410 Pathogenic type III effector avirulence factor Avr cleavage site-containing protein chr6 + View
Cucumis sativus L. CsaV3_2G017680 Pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein chr2 - View
Daucus carota DCAR_014262 hypothetical protein DCARv2_Chr4 + View
Daucus carota DCAR_001372 hypothetical protein DCARv2_Chr1 - View
Davidia involucrata Dinv19484 GWHABJS00000014 - View
Davidia involucrata Dinv42690 GWHABJS00000021 - View
Durio zibethinus Duzib187G0794 NW_019167860.1 + View
Eucalyptus grandis Eucgr.I00320 Chr09 + View
Erythranthe guttata Migut.L00070 scaffold_12 + View
Erythranthe guttata Migut.H02440 scaffold_8 - View
Eutrema salsugineum Thhalv10005264m.g scaffold_6 - View
Eutrema salsugineum Thhalv10015061m.g PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) scaffold_2 + View
Fragaria x ananassa FAN23G2482 Fvb1-3 - View
Fragaria x ananassa FAN28G1462 Fvb1-1 - View
Fragaria x ananassa FAN19G2300 Fvb1-4 - View
Gossypium hirsutum Gohir.A02G135500 A02 - View
Gossypium hirsutum Gohir.D03G046500 D03 + View
Glycine max Glyma.05G184200 Gm05 - View
Glycine max Glyma.08G142000 Gm08 - View
Glycine max Glyma.06G146800 Gm06 - View
Glycine max Glyma.04G219000 Gm04 + View
Gossypium raimondii Gorai.003G047500 Chr03 - View
Gossypium raimondii Gorai.008G101700 Chr08 + View
Lupinus albus Lalb_Chr13g0296221 Lalb_Chr13 - View
Lupinus albus Lalb_Chr12g0203511 Lalb_Chr12 + View
Lotus japonicus Lj1g0001228 chr1 + View
Lotus japonicus Lj4g0006175 chr4 + View
Magnolia biondii MBI05_g35014_MAGBIO AED:0.39 Chr05 - View
Magnolia biondii MBI02_g18928_MAGBIO AED:0.09 Chr02 + View
Malus domestica MD15G1332200 Protein of unknown function Chr15 + View
Manihot esculenta Manes.12G143000 Chromosome12 - View
Medicago truncatula Medtr8g091930 RPM1-interacting protein 4 (RIN4) family protein chr8 - View
Nelumbo nucifera Nn5g28892 chr5 + View
Nelumbo nucifera Nn1g05176 chr1 + View
Olea europaea Oeu028368.1 chr18 - View
Punica granatum PGR004G1449 NC_045131.1 + View
Prunus persica Prupe.6G172200 Pp06 + View
Pisum sativum Psat7g051000 Unknown gene chr7LG7 + View
Papaver somniferum PSO170G5757 NC_039360.1 + View
Populus trichocarpa Potri.005G084700 Chr05 - View
Populus trichocarpa Potri.007G080800 Chr07 + View
Phaseolus vulgaris Phvul.002G265100 Chr02 - View
Phaseolus vulgaris Phvul.009G139200 Chr09 + View
Quercus lobata QL06p032044 6 + View
Rosa chinensis RcHm_v2.0_Chr2g0116611 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim10G0149900 chr10 + View
Salvia bowleyana SalBow6G4655 GWHASIU00000002 - View
Salvia bowleyana SalBow5G5446 GWHASIU00000003 + View
Salix brachista Sabra07G0067800 GWHAAZH00000007 + View
Solanum lycopersicum Solyc04g051820.4 sorbin/SH3 domain protein (AHRD V3.3 *** AT5G09960.3) SL4.0ch04 + View
Solanum lycopersicum Solyc05g051710.4 sorbin/SH3 domain protein (AHRD V3.3 *** AT5G09960.1) SL4.0ch05 + View
Schrenkiella parvula Sp2g27930 ch2-4 + View
Schrenkiella parvula Sp6g33460 PF05627 - Cleavage site for pathogenic type III effector avirulence factor Avr (AvrRpt-cleavage) ch6-6 - View
Solanum pennellii Sopen05g030180 FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch05 + View
Solanum pennellii Sopen04g023160 FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response | BEST Arabidopsis thaliana protein match is: unknown protein Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400016551 Conserved gene of unknown function ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG400030107 Conserved gene of unknown function ST4.03ch05 + View
Selenicereus undatus Hund19653 Scaffold_33673 + View
Trochodendron aralioides TAR625G0139 group4 + View
Trochodendron aralioides TAR628G1039 group5 + View
Trochodendron aralioides TAR381G1174 group11 - View
Theobroma cacao Thecc.01G113600 Defence response Chromosome_1 - View
Tarenaya hassleriana THA.LOC104799275 uncharacterized protein LOC104799275 NW_010960188.1 - View
Trifolium pratense TPR.G23761 Tp57577_TGAC_v2_LG3 - View
Trifolium pratense TPR.G2220 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI53G0786 NC_052244.1 - View
Vaccinium macrocarpon vmacro18635 Protein of unknown function chr3_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro12899 Protein of unknown function chr11_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0251G0645 CM024069.1 - View
Vigna mungo VMungo1309G1910 CM024072.1 - View
Vitis vinifera GSVIVG01022234001 chr7 - View