Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold153G37059 scaffold153 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G1420 LG-11 - View
Acer truncatum Atru.chr1.545 chr1 + View
Actinidia chinensis Actinidia34071 Lachesis_group3 - View
Arabidopsis lyrata AL7G27680 scaffold_7 + View
Arabidopsis lyrata AL8G38930 scaffold_8 + View
Avicennia marina MSTRG.17227 ScioBoG_19743_HRSCAF_19834 - View
Avicennia marina MSTRG.27144 ScioBoG_8578_HRSCAF_8617 + View
Amaranthus hybridus Ah.07g208840 AmaHy_arrow1_Scaffold_7 - View
Aquilegia oxysepala Aqoxy7G00474 CHR07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6CE9RU PF01476 - LysM domain (LysM) arahy.Tifrunner.gnm1.Arahy.09 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6F7MAW arahy.Tifrunner.gnm1.Arahy.02 - View
Arabidopsis thaliana AT5G62150 peptidoglycan-binding LysM domain-containing protein peptidoglycan-binding LysM domain-containing protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: cell wall macromolecule catabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 15 plant structures%3B EXPRESSED DURING: 6 growth stages%3B BEST Arabidopsis thaliana protein match is: peptidoglycan-binding LysM domain-containing protein (TAIR:AT4G25433.1)%3B Has 63 Blast hits to 63 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 63%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr5 + View
Arabidopsis thaliana AT4G25433 peptidoglycan-binding LysM domain-containing protein peptidoglycan-binding LysM domain-containing protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: cell wall macromolecule catabolic process%3B LOCATED IN: endomembrane system%3B CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392)%3B BEST Arabidopsis thaliana protein match is: peptidoglycan-binding LysM domain-containing protein (TAIR:AT5G62150.1)%3B Has 63 Blast hits to 63 proteins in 12 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 63%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr4 - View
Amborella trichopoda ATR0757G184 AmTr_v1.0_scaffold00069 + View
Brassica carinata BcaC09g50770 ChrC09 + View
Brassica napus C03p64790 C03 - View
Brassica oleracea BolC3t18742H C3 - View
Brassica oleracea BolC2t12248H C2 + View
Brassica rapa BraA02t09136Z A02 + View
Camellia sinensis var. sinensis CSS0002091 PREDICTED: uncharacterized protein LOC104612680 [Nelumbo nucifera] Chr1 - View
Corylus avellana Haze_13779 Protein of unknown function 5 + View
Corylus avellana Haze_16700 Protein of unknown function 11 + View
Coffea canephora Cc02_g37120 Putative peptidoglycan-binding LysM domain-containing protein chr2 - View
Coffea canephora Cc02_g03510 Putative peptidoglycan-binding LysM domain-containing protein chr2 + View
Citrus clementina Ciclev10006227m.g scaffold_9 - View
Carpinus fangiana Cfa008265 Cfa03 - View
Cardamine hirsuta CARHR275920 Peptidoglycan-binding LysM domain-containing protein Chr8 + View
Cardamine hirsuta CARHR232850 peptidoglycan-binding LysM domain-containing protein Chr7 - View
Carya illinoinensis CiPaw.01G257200 PF01476 - LysM domain (LysM) Chr01 + View
Carya illinoinensis CiPaw.02G164100 PF01476 - LysM domain (LysM) Chr02 + View
Carya illinoinensis CiPaw.03G101100 PF01476 - LysM domain (LysM) Chr03 - View
Carya illinoinensis CiPaw.04G068800 PF01476 - LysM domain (LysM) Chr04 + View
Cucumis melo MELO3C006864.2 Peptidoglycan-binding LysM domain-containing family protein chr06 - View
Cucumis melo MELO3C022526.2 Peptidoglycan-binding LysM domain protein chr11 - View
Carica papaya Cpa.g.sc4.215 supercontig_4 - View
Chenopodium quinoa AUR62016047 Protein of unknown function C_Quinoa_Scaffold_3256 + View
Chenopodium quinoa AUR62021253 Protein of unknown function C_Quinoa_Scaffold_1783 + View
Capsella rubella Carub.0008s2282 scaffold_8 + View
Capsella rubella Carub.0007s1556 PF01476 - LysM domain (LysM) scaffold_7 + View
Cucumis sativus L. CsaV3_3G016690 Peptidoglycan-binding LysM domain-containing family protein chr3 - View
Cucumis sativus L. CsaV3_6G005880 peptidoglycan-binding LysM domain-containing protein chr6 + View
Daucus carota DCAR_006902 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_009405 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv28499 GWHABJS00000004 + View
Davidia involucrata Dinv35163 GWHABJS00000009 + View
Durio zibethinus Duzib068G0943 NW_019167838.1 + View
Durio zibethinus Duzib084G0244 NW_019167827.1 + View
Erigeron canadensis ECA238G2229 Conyza_canadensis_scaffold:6 - View
Eucalyptus grandis Eucgr.K00211 Chr11 - View
Erythranthe guttata Migut.F01155 scaffold_6 + View
Erythranthe guttata Migut.B01675 scaffold_2 - View
Erythranthe guttata Migut.F00389 scaffold_6 + View
Eutrema salsugineum Thhalv10027278m.g scaffold_1 + View
Eutrema salsugineum Thhalv10005374m.g scaffold_6 - View
Fragaria x ananassa FAN06G4767 Fvb7-2 - View
Fragaria x ananassa FAN03G2816 Fvb7-3 + View
Fragaria x ananassa FAN03G2675 Fvb7-3 + View
Fragaria x ananassa FAN06G2006 Fvb7-2 - View
Gossypium hirsutum Gohir.D11G088600 D11 - View
Gossypium hirsutum Gohir.A09G179700 PF01476 - LysM domain (LysM) A09 - View
Gossypium hirsutum Gohir.A11G084500 A11 - View
Gossypium hirsutum Gohir.D09G175000 PF01476 - LysM domain (LysM) D09 - View
Gossypium hirsutum Gohir.A09G038900 PF01476 - LysM domain (LysM) A09 + View
Gossypium hirsutum Gohir.A12G261800 PF01476 - LysM domain (LysM) A12 + View
Gossypium hirsutum Gohir.D12G262500 PF01476 - LysM domain (LysM) D12 + View
Glycine max Glyma.16G199900 PF01476 - LysM domain (LysM) Gm16 + View
Glycine max Glyma.07G079600 PF01476 - LysM domain (LysM) Gm07 + View
Glycine max Glyma.09G148200 PF01476 - LysM domain (LysM) Gm09 + View
Glycine max Glyma.03G018400 Gm03 + View
Gossypium raimondii Gorai.008G116100 Chr08 - View
Gossypium raimondii Gorai.008G281400 Chr08 + View
Gossypium raimondii Gorai.007G094700 Chr07 - View
Gossypium raimondii Gorai.006G197100 Chr06 - View
Helianthus annuus HanXRQChr14g0461961 Uncharacterized protein, conserved in plant genome(s), supported by expression data HanXRQChr14 + View
Helianthus annuus HanXRQChr07g0206751 Probable peptidoglycan-binding LysM domain-containing protein HanXRQChr07 - View
Lupinus albus Lalb_Chr01g0008931 Lalb_Chr01 - View
Lupinus albus Lalb_Chr19g0131111 PF01476 - LysM domain (LysM) Lalb_Chr19 + View
Lotus japonicus Lj3g0006905 PF01476 - LysM domain (LysM) chr3 + View
Lactuca sativa Lsat_1_v5_gn_2_130401 Lsat_1_v8_lg_2 - View
Magnolia biondii MBI04_g40839_MAGBIO AED:0.01 Chr04 - View
Malus domestica MD01G1194400 peptidoglycan-binding LysM domain-containing protein Chr01 - View
Manihot esculenta Manes.06G142100 Chromosome06 - View
Manihot esculenta Manes.14G030100 Chromosome14 + View
Manihot esculenta Manes.05G040600 Chromosome05 + View
Medicago truncatula Medtr1g101680 peptidoglycan-binding LysM domain protein chr1 + View
Nelumbo nucifera Nn1g01324 chr1 - View
Nelumbo nucifera Nn6g34287 chr6 + View
Olea europaea Oeu030137.1 chr11 + View
Olea europaea Oeu022536.1 chr1 - View
Oryza sativa ssp. japonica Os04g0572800 Similar to OSIGBa0147H17.4 protein. chr04 + View
Oryza sativa ssp. japonica Os10g0524300 LysM domain-containing protein, Embryo sac development chr10 + View
Punica granatum PGR142G1599 NC_045128.1 + View
Punica granatum PGR042G2369 NC_045130.1 + View
Prunus persica Prupe.2G288600 PF01476 - LysM domain (LysM) Pp02 - View
Populus trichocarpa Potri.012G135100 PF01476 - LysM domain (LysM) Chr12 + View
Populus trichocarpa Potri.015G137500 PF01476 - LysM domain (LysM) Chr15 + View
Populus trichocarpa Potri.002G152600 PF01476 - LysM domain (LysM) Chr02 - View
Phaseolus vulgaris Phvul.004G122750 PF01476 - LysM domain (LysM) Chr04 + View
Phaseolus vulgaris Phvul.010G089500 PF01476 - LysM domain (LysM) Chr10 - View
Quercus lobata QL09p015386 9 - View
Quercus lobata QL08p050853 8 + View
Rosa chinensis RcHm_v2.0_Chr1g0376531 RcHm_v2.0_Chr1 - View
Rhododendron simsii Rhsim09G0195400 chr09 - View
Rhododendron simsii Rhsim07G0022100 chr07 + View
Rhododendron simsii Rhsim03G0175700 chr03 - View
Salvia bowleyana SalBow2G0516 GWHASIU00000007 + View
Salix brachista Sabra14G0054500 GWHAAZH00000014 - View
Salix brachista Sabra12G0101700 GWHAAZH00000012 + View
Salix brachista Sabra15G0148900 GWHAAZH00000015 + View
Simmondsia chinensis Sc13g0008320 GWHAASQ00000013 - View
Sechium edule Sed0013254 LG13 + View
Sechium edule Sed0001412 LG04 - View
Sechium edule Sed0007342 LG07 + View
Solanum lycopersicum Solyc03g026360.1 Peptidoglycan-binding LysM domain-containing protein (AHRD V3.3 *** A0A2U1MKY7_ARTAN) SL4.0ch03 + View
Schrenkiella parvula Sp7g23470 PF01476 - LysM domain (LysM) ch7-4 - View
Schrenkiella parvula Sp2g25320 ch2-4 + View
Solanum pennellii Sopen03g005260 peptidoglycan-binding LysM domain-containing protein | FUNCTIONS IN: molecular_function unknown | INVOLVED IN: cell wall macromolecule catabolic process | LOCATED IN: endomembrane system | EXPRESSED IN: 15 plant structures | EXPRESSED DURING: 6 growth stages | BEST Arabidopsis thaliana protein match is: peptidoglycan-binding LysM domain-containing protein Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400014303 Conserved gene of unknown function ST4.03ch03 - View
Trochodendron aralioides TAR375G0393 group15 - View
Theobroma cacao Thecc.01G369800 Peptidoglycan-binding LysM domain-containing protein Chromosome_1 + View
Theobroma cacao Thecc.03G168800 Peptidoglycan-binding LysM domain-containing protein Chromosome_3 - View
Tarenaya hassleriana THA.LOC104811486 uncharacterized protein LOC104811486 NW_010965372.1 + View
Tarenaya hassleriana THA.LOC104818271 uncharacterized protein LOC104818271 NW_010966092.1 - View
Trifolium pratense TPR.G17578 Tp57577_TGAC_v2_scaf_223 - View
Trifolium pratense TPR.G17420 Tp57577_TGAC_v2_scaf_229 + View
Tripterygium wilfordii TWI23G1292 NC_052239.1 + View
Tripterygium wilfordii TWI39G1310 NC_052250.1 - View
Tripterygium wilfordii TWI59G1303 NC_052248.1 - View
Vaccinium macrocarpon vmacro09868 Protein of unknown function chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0464G0406 CM024077.1 + View
Vigna mungo VMungo0331G1350 CM024078.1 + View
Zea mays Zm00001eb428620 Zm00001e158301 peptidoglycan-binding LysM domain-containing protein 10 - View
Zea mays Zm00001eb021470 Zm00001e002154 peptidoglycan-binding LysM domain-containing protein 1 + View