Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold221G42704 scaffold221 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG11G7010 LG-11 + View
Acer truncatum Atru.chr12.293 chr12 + View
Actinidia chinensis Actinidia02910 Lachesis_group22 + View
Arabidopsis lyrata AL6G15910 scaffold_6 + View
Avicennia marina MSTRG.259 ScioBoG_102831_HRSCAF_103044 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1DVI41 K16547 - protein NEDD1 (NEDD1) arahy.Tifrunner.gnm1.Arahy.17 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1G1YD8 PTHR11136//PTHR11136:SF7 - FOLYLPOLYGLUTAMATE SYNTHASE-RELATED // FOLYLPOLYGLUTAMATE SYNTHASE arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TM7LMJ K01930//K16547 - folylpolyglutamate synthase (FPGS) // protein NEDD1 (NEDD1) arahy.Tifrunner.gnm1.Arahy.07 + View
Arabidopsis thaliana AT5G05970 Transducin/WD40 repeat-like superfamily protein a WD40 repeat protein related to the animal NEDD1/GCP-WD protein%2C which interacts with the g-tubulin complex. Plays a critical role in MT organization during mitosis NEURAL PRECURSOR CELL EXPRESSED%2C DEVELOPMENTALLY DOWN-REGULATED GENE 1 (NEDD1)%3B CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40 repeat (InterPro:IPR001680)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT2G43770.1)%3B Has 25047 Blast hits to 16019 proteins in 612 species: Archae - 24%3B Bacteria - 4682%3B Metazoa - 9072%3B Fungi - 5014%3B Plants - 2729%3B Viruses - 0%3B Other Eukaryotes - 3526 (source: NCBI BLink). Chr5 + View
Brassica napus A10p30380 A10 - View
Brassica napus C09p70820 C09 - View
Brassica oleracea BolC9t59840H C9 + View
Brassica rapa BraA10t45076Z A10 + View
Camellia sinensis var. sinensis CSS0028733 Folylpolyglutamate synthase [Morus notabilis] Chr1 + View
Coffea canephora Cc02_g07290 Transducin/WD40 repeat-like superfamily protein chr2 + View
Citrus clementina Ciclev10033559m.g scaffold_4 + View
Cardamine hirsuta CARHR207230 Folylpolyglutamate synthase Chr6 + View
Cardamine hirsuta CARHR085910 Folylpolyglutamate synthase Chr3 - View
Carya illinoinensis CiPaw.02G187400 PTHR11136//PTHR11136:SF6 - FOLYLPOLYGLUTAMATE SYNTHASE-RELATED // SUBFAMILY NOT NAMED Chr02 + View
Citrullus lanatus ClCG11G006570 Protein NEDD1 CG_Chr11 + View
Cucumis melo MELO3C008247.2 Katanin p80 WD40 repeat-containing subunit B1 homolog chr03 - View
Carica papaya Cpa.g.sc19.263 supercontig_19 + View
Chenopodium quinoa AUR62040687 FPGS1: Folylpolyglutamate synthase C_Quinoa_Scaffold_1465 - View
Capsella rubella Carub.0006s0486 K16547 - protein NEDD1 (NEDD1) scaffold_6 + View
Cucumis sativus L. CsaV3_6G001430 protein NEDD1 chr6 - View
Daucus carota DCAR_011747 hypothetical protein DCARv2_Chr3 - View
Durio zibethinus Duzib114G0845 NW_019167926.1 + View
Erigeron canadensis ECA233G1462 Conyza_canadensis_scaffold:1 + View
Erythranthe guttata Migut.F00740 scaffold_6 + View
Eutrema salsugineum Thhalv10012734m.g K16547 - protein NEDD1 (NEDD1) scaffold_2 + View
Fragaria x ananassa FAN10G0370 K16547 - protein NEDD1 (NEDD1) Fvb7-1 - View
Fragaria x ananassa FAN01G0960 KOG4378 - Nuclear protein COP1 Fvb7-4 + View
Gossypium hirsutum Gohir.A06G165900 6.3.2.17 - Tetrahydrofolate synthase / Tetrahydrofolylpolyglutamate synthase A06 - View
Gossypium hirsutum Gohir.A05G302400 K16547 - protein NEDD1 (NEDD1) A05 - View
Gossypium hirsutum Gohir.D10G237000 K16547 - protein NEDD1 (NEDD1) D10 + View
Glycine max Glyma.18G034200 K01930 - folylpolyglutamate synthase (FPGS) Gm18 + View
Gossypium raimondii Gorai.011G270200 Chr11 - View
Helianthus annuus HanXRQChr08g0221221 Probable DHFS-FPGS homolog D HanXRQChr08 + View
Lupinus albus Lalb_Chr17g0346411 PTHR22847//PTHR22847:SF450 - WD40 REPEAT PROTEIN // PROTEIN NEDD1 Lalb_Chr17 - View
Lupinus albus Lalb_Chr15g0084491 6.3.2.17 - Tetrahydrofolate synthase / Tetrahydrofolylpolyglutamate synthase Lalb_Chr15 + View
Lupinus albus Lalb_Chr10g0104791 K16547 - protein NEDD1 (NEDD1) Lalb_Chr10 - View
Lonicera japonica Lj8A76T111 GWHAAZE00000008 + View
Lactuca sativa Lsat_1_v5_gn_8_14640 K16547 - protein NEDD1 (NEDD1) Lsat_1_v8_lg_8 + View
Lactuca sativa Lsat_1_v5_gn_9_63441 K01930 - folylpolyglutamate synthase (FPGS) Lsat_1_v8_lg_9 + View
Manihot esculenta Manes.10G022400 Chromosome10 + View
Petunia axillaris Peaxi162Scf00164g01517 Folylpolyglutamate synthase Peaxi162Scf00164 + View
Rhododendron simsii Rhsim03G0136800 chr03 + View
Rhododendron simsii Rhsim09G0169300 chr09 + View
Salvia bowleyana SalBow6G0774 GWHASIU00000002 - View
Salvia bowleyana SalBow6G0807 GWHASIU00000002 + View
Sechium edule Sed0004245 LG11 + View
Sechium edule Sed0007578 LG03 - View
Solanum lycopersicum Solyc05g052920.4 Folylpolyglutamate synthase (AHRD V3.3 *** A0A2G3CHR0_CAPCH) SL4.0ch05 - View
Solanum pennellii Sopen05g031430 DHFS-FPGS homolog B (DFB) | CONTAINS InterPro DOMAIN/s: Folylpolyglutamate synthetase, conserved site , Mur ligase, central , Mur ligase, C-terminal , Folylpolyglutamate synthetase | BEST Arabidopsis thaliana protein match is: DHFS-FPGS homolog D Spenn-ch05 - View
Solanum tuberosum PGSC0003DMG400027193 Folylpolyglutamate synthase ST4.03ch05 - View
Trochodendron aralioides TAR633G1227 group2 - View
Trochodendron aralioides TAR369G0466 group18 - View
Theobroma cacao Thecc.10G033200 Transducin/WD40 repeat-like superfamily protein Chromosome_10 + View
Tarenaya hassleriana THA.LOC104826868 protein NEDD1-like isoform X1 NW_010967707.1 + View
Tarenaya hassleriana THA.LOC104816577 protein NEDD1-like NW_010965775.1 + View
Vaccinium macrocarpon vmacro07029 Similar to FPGS1: Folylpolyglutamate synthase (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro10208 Similar to NEDD1: Protein NEDD1 (Arabidopsis thaliana OX%3D3702) chr8_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo0647G0039 CM024073.1 - View