Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold24G10429 scaffold24 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G5620 LG-7 - View
Acer truncatum Atru.chr13.1551 chr13 + View
Actinidia chinensis Actinidia03422 Lachesis_group27 - View
Actinidia chinensis Actinidia29485 Lachesis_group7 - View
Actinidia chinensis Actinidia15217 Lachesis_group26 + View
Actinidia chinensis Actinidia21282 Lachesis_group28 + View
Arabidopsis lyrata AL1G34790 scaffold_1 - View
Avicennia marina MSTRG.24175 ScioBoG_4088_HRSCAF_4107 - View
Avicennia marina MSTRG.25363 ScioBoG_4119_HRSCAF_4138 - View
Aquilegia oxysepala Aqoxy6G00322 CHR06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.9Y6HC5 K03070 - preprotein translocase subunit SecA (secA) arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.V5YSST K03070 - preprotein translocase subunit SecA (secA) arahy.Tifrunner.gnm1.Arahy.08 - View
Arabidopsis thaliana AT1G21650 Preprotein translocase SecA family protein Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality. Preprotein translocase SecA family protein%3B FUNCTIONS IN: ATPase activity%2C P-P-bond-hydrolysis-driven protein transmembrane transporter activity%2C ATP binding%3B INVOLVED IN: intracellular protein transport%2C protein targeting%2C protein transport by the Sec complex%2C protein import%3B LOCATED IN: internal side of plasma membrane%2C chloroplast%2C membrane%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: SecA%2C preprotein translocase (InterPro:IPR022491)%2C SecA motor DEAD (InterPro:IPR014018)%2C SecA Wing/Scaffold (InterPro:IPR011116)%2C SecA preprotein%2C cross-linking domain (InterPro:IPR011130)%2C SecA conserved site (InterPro:IPR020937)%2C SecA DEAD-like (InterPro:IPR011115)%2C SecA protein (InterPro:IPR000185)%3B BEST Arabidopsis thaliana protein match is: Albino or Glassy Yellow 1 (TAIR:AT4G01800.1)%3B Has 21976 Blast hits to 13078 proteins in 2820 species: Archae - 0%3B Bacteria - 13647%3B Metazoa - 53%3B Fungi - 1%3B Plants - 97%3B Viruses - 0%3B Other Eukaryotes - 8178 (source: NCBI BLink). Preprotein translocase SecA family protein%3B FUNCTIONS IN: ATPase activity%2C zinc ion binding%2C P-P-bond-hydrolysis-driven protein transmembrane transporter activity%2C ATP binding%3B INVOLVED IN: intracellular protein transport%2C protein targeting%2C protein transport by the Sec complex%2C protein import%3B LOCATED IN: internal side of plasma membrane%2C membrane%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%2C SecA%2C preprotein translocase (InterPro:IPR022491)%2C WD40 repeat (InterPro:IPR001680)%2C SecA motor DEAD (InterPro:IPR014018)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C SecA Wing/Scaffold (InterPro:IPR011116)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C SecA preprotein%2C cross-linking domain (InterPro:IPR011130)%2C SecA DEAD-like (InterPro:IPR011115)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C SecA conserved site (InterPro:IPR020937)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%2C SecA protein (InterPro:IPR000185)%3B BEST Arabidopsis thaliana protein match is: zinc ion binding (TAIR:AT1G21651.1). Chr1 - View
Brassica carinata BcaC05g26082 ChrC05 - View
Brassica napus A06p17720 A06 - View
Brassica napus A08p28880 A08 + View
Brassica napus C08p20970 C08 - View
Brassica napus C05p20620 C05 - View
Brassica oleracea BolC8t49734H C8 - View
Brassica oleracea BolC5t30760H C5 - View
Brassica rapa BraA08t34819Z A08 + View
Camellia sinensis var. sinensis CSS0021561 PREDICTED: protein translocase subunit SECA2, chloroplastic isoform X2 [Vitis vinifera] Chr9 + View
Cicer arietinum L. Ca_16603_v3 Ca_LG5_v3 + View
Coffea canephora Cc10_g12630 Putative zinc ion binding chr10 + View
Citrus clementina Ciclev10000294m.g scaffold_5 + View
Cardamine hirsuta CARHR022000 WD-40 repeat-containing protein Chr1 - View
Carya illinoinensis CiPaw.15G032300 PTHR30612//PTHR30612:SF5 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM // PROTEIN TRANSLOCASE SUBUNIT SECA2, CHLOROPLASTIC Chr15 - View
Carica papaya Cpa.g.sc64.146 supercontig_64 + View
Chenopodium quinoa AUR62007722 SECA2: Protein translocase subunit SECA2, chloroplastic C_Quinoa_Scaffold_2646 - View
Chenopodium quinoa AUR62013420 SECA2: Protein translocase subunit SECA2, chloroplastic C_Quinoa_Scaffold_1611 + View
Capsella rubella Carub.0001s2107 PTHR30612//PTHR30612:SF5 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM // PROTEIN TRANSLOCASE SUBUNIT SECA2, CHLOROPLASTIC scaffold_1 - View
Durio zibethinus Duzib041G0130 NW_019167826.1 + View
Durio zibethinus Duzib093G1991 NW_019167937.1 - View
Eucalyptus grandis Eucgr.F03832 Chr06 + View
Erythranthe guttata Migut.C01061 scaffold_3 + View
Erythranthe guttata Migut.N03263 scaffold_14 - View
Eutrema salsugineum Thhalv10006535m.g PTHR30612:SF5 - PROTEIN TRANSLOCASE SUBUNIT SECA2, CHLOROPLASTIC scaffold_5 + View
Fragaria x ananassa FAN24G1236 K03070 - preprotein translocase subunit SecA (secA) Fvb2-2 - View
Fragaria x ananassa FAN20G0562 KOG0265//KOG0315//KOG0646 - U5 snRNP-specific protein-like factor and related proteins // G-protein beta subunit-like protein (contains WD40 repeats) // WD40 repeat protein Fvb2-3 + View
Fragaria vesca FvH4_2g27740 PTHR22844//PTHR22844:SF215 - F-BOX AND WD40 DOMAIN PROTEIN // SUBFAMILY NOT NAMED Fvb2 + View
Glycine max Glyma.06G116800 PTHR22844//PTHR22844:SF215 - F-BOX AND WD40 DOMAIN PROTEIN // SUBFAMILY NOT NAMED Gm06 + View
Gossypium raimondii Gorai.005G088100 Chr05 - View
Lupinus albus Lalb_Chr08g0241141 PTHR30612//PTHR30612:SF5 - SECA INNER MEMBRANE COMPONENT OF SEC PROTEIN SECRETION SYSTEM // PROTEIN TRANSLOCASE SUBUNIT SECA2, CHLOROPLASTIC Lalb_Chr08 - View
Lonicera japonica Lj7C347T10 GWHAAZE00000007 - View
Manihot esculenta Manes.18G082000 Chromosome18 + View
Manihot esculenta Manes.02G167501 Chromosome02 + View
Medicago truncatula Medtr3g088535 preprotein translocase SecA family protein, putative chr3 + View
Punica granatum PGR042G2877 NC_045130.1 + View
Prunus persica Prupe.1G490400 K03070 - preprotein translocase subunit SecA (secA) Pp01 - View
Pisum sativum Psat5g085000 SecA DEAD-like domain chr5LG3 - View
Phaseolus vulgaris Phvul.009G129300 PTHR22844//PTHR22844:SF215 - F-BOX AND WD40 DOMAIN PROTEIN // SUBFAMILY NOT NAMED Chr09 + View
Quercus lobata QL09p032695 9 - View
Rosa chinensis RcHm_v2.0_Chr6g0296591 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim11G0070600 chr11 - View
Salvia bowleyana SalBow2G0524 GWHASIU00000007 - View
Salix brachista Sabra02G0061200 GWHAAZH00000002 + View
Schrenkiella parvula Sp1g19170 PTHR30612:SF5 - PROTEIN TRANSLOCASE SUBUNIT SECA2, CHLOROPLASTIC ch1-1 - View
Selenicereus undatus Hund26778 Scaffold_2055 - View
Trochodendron aralioides TAR625G1206 group4 + View
Theobroma cacao Thecc.08G132300 Zinc ion binding Chromosome_8 + View
Tripterygium wilfordii TWI32G0149 NC_052254.1 - View
Tripterygium wilfordii TWI34G0871 NC_052235.1 + View
Vigna mungo VMungo1309G2387 CM024072.1 + View
Vitis vinifera GSVIVG01008813001 chr18 - View