Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold45G17035 scaffold45 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia38326 Lachesis_group15 + View
Actinidia chinensis Actinidia23552 Lachesis_group25 - View
Avicennia marina MSTRG.26279 ScioBoG_52287_HRSCAF_52434 - View
Avicennia marina MSTRG.6134 ScioBoG_102839_HRSCAF_103093 + View
Avicennia marina MSTRG.10692 ScioBoG_13798_HRSCAF_13862 + View
Capsicum annuum CAN.G551.41 PGAv.1.6.scaffold551 + View
Cannabis sativa CANSAT11G0509 NC_044377.1 - View
Cicer arietinum L. Ca_21124_v3 Ca_LG7_v3 + View
Corylus avellana Haze_19211 Similar to EIF5A1: Eukaryotic translation initiation factor 5A-1/2 (Solanum tuberosum OX%3D4113) 7 - View
Coffea canephora Cc06_g15050 Eukaryotic translation initiation factor 5A-4 chr6 - View
Citrus clementina Ciclev10009759m.g scaffold_1 - View
Citrullus lanatus ClCG06G012390 Eukaryotic translation initiation factor 5A CG_Chr06 + View
Daucus carota DCAR_014811 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv42860 GWHABJS00000085 - View
Davidia involucrata Dinv43240 GWHABJS00000085 + View
Durio zibethinus Duzib168G1395 NW_019168159.1 - View
Durio zibethinus Duzib187G1984 NW_019167860.1 + View
Erythranthe guttata Migut.J01338 scaffold_10 + View
Fragaria x ananassa FAN28G0462 K03263 - translation initiation factor 5A (EIF5A) Fvb1-1 + View
Fragaria x ananassa FAN23G1937 K03263 - translation initiation factor 5A (EIF5A) Fvb1-3 - View
Fragaria x ananassa FAN26G1669 K03263 - translation initiation factor 5A (EIF5A) Fvb1-2 + View
Fragaria vesca FvH4_1g00990 K03263 - translation initiation factor 5A (EIF5A) Fvb1 - View
Glycine max Glyma.02G203700 K03263 - translation initiation factor 5A (EIF5A) Gm02 + View
Hydrangea macrophylla Hma1.2p1_0028F.1_g017560 Hma1.2p1_0028F.1 + View
Hydrangea macrophylla Hma1.2p1_0222F.1_g093510 Hma1.2p1_0222F.1 + View
Lotus japonicus Lj4g0016260 K03263 - translation initiation factor 5A (EIF5A) chr4 - View
Lonicera japonica Lj7A458G51 GWHAAZE00000007 + View
Lonicera japonica Lj9C716T3 GWHAAZE00000009 + View
Lactuca sativa Lsat_1_v5_gn_7_49720 K02180//K03263 - cell cycle arrest protein BUB3 (BUB3) // translation initiation factor 5A (EIF5A) Lsat_1_v8_lg_7 + View
Malus domestica MD15G1152300 eukaryotic elongation factor 5A-1 Chr15 - View
Malus domestica MD02G1008000 eukaryotic elongation factor 5A-1 Chr02 - View
Manihot esculenta Manes.06G036000 Chromosome06 - View
Petunia axillaris Peaxi162Scf00401g00830 Eukaryotic translation initiation factor 5A-3 Peaxi162Scf00401 - View
Punica granatum PGR142G1847 NC_045128.1 + View
Prunus persica Prupe.7G262400 K03263 - translation initiation factor 5A (EIF5A) Pp07 + View
Populus trichocarpa Potri.006G185000 K03263 - translation initiation factor 5A (EIF5A) Chr06 - View
Populus trichocarpa Potri.018G107300 K03263 - translation initiation factor 5A (EIF5A) Chr18 - View
Phaseolus vulgaris Phvul.003G156333 K03263 - translation initiation factor 5A (EIF5A) Chr03 - View
Quercus lobata QL02p093167 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr2g0085721 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim03G0257000 chr03 + View
Salix brachista Sabra18G0091300 GWHAAZH00000018 - View
Salix brachista Sabra06G0140500 GWHAAZH00000006 - View
Sechium edule Sed0012692 LG08 - View
Solanum lycopersicum Solyc07g005560.3 Eukaryotic translation initiation factor 5A (AHRD V3.3 *** A0A2G3BXD8_CAPCH) SL4.0ch07 + View
Solanum lycopersicum Solyc12g010060.2 Eukaryotic translation initiation factor 5A (AHRD V3.3 *** Q6S021_CAPAN) SL4.0ch12 - View
Solanum pennellii Sopen12g004940 Eukaryotic translation initiation factor 5A-1/2 (eIF-5A-1/2) (eIF-4D) - Solanum tuberosum (Potato), Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced. | eukaryotic elongation factor 5A-1 (ELF5A-1) | FUNCTIONS IN: ribosome binding, RNA binding, translation elongation factor activity, translation initiation factor activity | INVOLVED IN: translational initiation, xylem development | LOCATED IN: cellular_component unknown | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 11 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold , Translation elongation factor, IF5A, hypusine site , Translation protein SH3-like, subgroup , Translation elongation factor, IF5A , Translation elongation factor, IF5A C-terminal , Translation protein SH3-like , Nucleic acid-binding, OB-fold-like , KOW | BEST Arabidopsis thaliana protein match is: eukaryotic elongation factor 5A-3 Spenn-ch12 - View
Solanum tuberosum PGSC0003DMG400007830 Eukaryotic translation initiation factor 5A-1/2 ST4.03ch12 + View
Solanum tuberosum PGSC0003DMG400011137 Eukaryotic translation initiation factor 5A-3 ST4.03ch07 + View
Trochodendron aralioides TAR383G0110 group10 - View
Trochodendron aralioides TAR626G1501 group3 + View
Theobroma cacao Thecc.09G031300 Eukaryotic translation initiation factor 5A-1 Chromosome_9 - View
Tripterygium wilfordii TWI34G1203 NC_052235.1 - View
Tripterygium wilfordii TWI63G1671 NC_052240.1 + View
Vaccinium macrocarpon vmacro06084 Similar to Eukaryotic translation initiation factor 5A-4 (Solanum lycopersicum OX%3D4081) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G2751 CM024074.1 + View