Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold8G04620 scaffold8 + View
SGA_v2.0_scaffold3G01536 scaffold3 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G7640 LG-8 - View
Acer truncatum Atru.chr11.2636 chr11 - View
Acer truncatum Atru.chr3.2555 chr3 - View
Actinidia chinensis Actinidia16303 Lachesis_group24 - View
Actinidia chinensis Actinidia20296 Lachesis_group18 + View
Actinidia chinensis Actinidia06881 Lachesis_group13 - View
Arabidopsis lyrata AL1G58950 scaffold_1 - View
Avicennia marina MSTRG.17578 ScioBoG_19834_HRSCAF_19925 - View
Avicennia marina MSTRG.28081 ScioBoG_94932_HRSCAF_95134 + View
Amaranthus hybridus Ah.06g193570 Transcription factor bHLH130 (Basic helix-loop-helix protein 130) (AtbHLH130) (bHLH 130) (Transcription factor EN 69) (bHLH transcription factor bHLH130) AmaHy_arrow1_Scaffold_6 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HQ4J8E PF00010 - Helix-loop-helix DNA-binding domain (HLH) arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5ZHV62 PTHR16223:SF29 - TRANSCRIPTION FACTOR BHLH117-RELATED arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Y2E5VB PF00010 - Helix-loop-helix DNA-binding domain (HLH) arahy.Tifrunner.gnm1.Arahy.18 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TS407L PF00010 - Helix-loop-helix DNA-binding domain (HLH) arahy.Tifrunner.gnm1.Arahy.13 + View
Arabidopsis thaliana AT1G51140 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Encodes a basic helix?loop?helix-type transcription factor involved in photoperiodism flowering. basic helix-loop-helix (bHLH) DNA-binding superfamily protein%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092)%2C Helix-loop-helix DNA-binding (InterPro:IPR011598)%3B BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G42280.1)%3B Has 1835 Blast hits to 1829 proteins in 66 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1%3B Fungi - 5%3B Plants - 1818%3B Viruses - 0%3B Other Eukaryotes - 11 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR0605G247 AmTr_v1.0_scaffold00022 - View
Brassica carinata BcaB07g33561 ChrB07 - View
Brassica carinata BcaC08g43287 ChrC08 - View
Brassica napus C06p06370 C06 - View
Brassica napus A06p02640 A06 + View
Brassica oleracea BolC6t35747H C6 - View
Brassica rapa BraA06t23473Z A06 + View
Beta vulgaris EL10Ac4g10307 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Chr4_EL10_PGA_scaffold1 + View
Camellia sinensis var. sinensis CSS0030604 PREDICTED: transcription factor bHLH130-like isoform X2 [Vitis vinifera] Chr11 + View
Camellia sinensis var. sinensis CSS0038707 basic helix-loop-helix family protein [Populus trichocarpa] Chr3 + View
Cannabis sativa CANSAT54G2065 NC_044375.1 + View
Cicer arietinum L. Ca_01280_v3 Ca_LG1_v3 - View
Cicer arietinum L. Ca_08493_v3 Ca_LG3_v3 + View
Corylus avellana Haze_19931 Similar to BHLH130: Transcription factor bHLH130 (Arabidopsis thaliana OX%3D3702) 10 + View
Corylus avellana Haze_23074 Similar to BHLH122: Transcription factor bHLH122 (Arabidopsis thaliana OX%3D3702) 6 - View
Coffea canephora Cc02_g27520 Putative Transcription factor bHLH122 chr2 - View
Citrus clementina Ciclev10005233m.g scaffold_9 + View
Citrus clementina Ciclev10015437m.g scaffold_2 - View
Carpinus fangiana Cfa016883 Cfa07 + View
Carpinus fangiana Cfa009722 Cfa04 - View
Cardamine hirsuta CARHR041180 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr1 - View
Carya illinoinensis CiPaw.14G122200 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Chr14 + View
Carya illinoinensis CiPaw.13G002700 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Chr13 - View
Carya illinoinensis CiPaw.09G033500 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Chr09 - View
Carya illinoinensis CiPaw.13G164300 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Chr13 + View
Citrullus lanatus ClCG09G004340 basic helix-loop-helix (bHLH) DNA-binding superfamily protein LENGTH=359 CG_Chr09 + View
Cucumis melo MELO3C023532.2 transcription factor bHLH130-like isoform X2 chr01 - View
Carica papaya Cpa.g.sc84.89 supercontig_84 + View
Chenopodium quinoa AUR62024365 BHLH130: Transcription factor bHLH130 C_Quinoa_Scaffold_2876 - View
Chenopodium quinoa AUR62019260 BHLH130: Transcription factor bHLH130 C_Quinoa_Scaffold_3107 - View
Chenopodium quinoa AUR62000088 BHLH130: Transcription factor bHLH130 C_Quinoa_Scaffold_2088 - View
Capsella rubella Carub.0001s4005 PTHR16223:SF29 - TRANSCRIPTION FACTOR BHLH117-RELATED scaffold_1 - View
Cucumis sativus L. CsaV3_7G031270 transcription factor bHLH130-like isoform X2 chr7 + View
Daucus carota DCAR_002048 hypothetical protein DCARv2_Chr1 - View
Daucus carota DCAR_013566 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv08044 GWHABJS00000003 - View
Davidia involucrata Dinv36291 GWHABJS00000007 + View
Durio zibethinus Duzib150G1464 NW_019167882.1 + View
Durio zibethinus Duzib168G1008 NW_019168159.1 + View
Durio zibethinus Duzib093G2022 NW_019167937.1 + View
Erigeron canadensis ECA233G3932 Conyza_canadensis_scaffold:1 + View
Erigeron canadensis ECA238G3821 Conyza_canadensis_scaffold:6 + View
Erigeron canadensis ECA248G2518 Conyza_canadensis_scaffold:9 + View
Eucalyptus grandis Eucgr.J00796 Chr10 + View
Eucalyptus grandis Eucgr.A02417 Chr01 + View
Erythranthe guttata Migut.J01801 scaffold_10 + View
Erythranthe guttata Migut.B01333 scaffold_2 + View
Erythranthe guttata Migut.D00568 scaffold_4 - View
Eutrema salsugineum Thhalv10011463m.g PTHR16223:SF29 - TRANSCRIPTION FACTOR BHLH117-RELATED scaffold_7 + View
Fragaria x ananassa FAN16G2983 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Fvb3-3 + View
Fragaria x ananassa FAN25G3836 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Fvb3-1 - View
Fragaria x ananassa FAN11G0318 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Fvb3-4 - View
Fragaria x ananassa FAN10G3413 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Fvb7-1 + View
Fragaria x ananassa FAN14G0328 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Fvb6-1 + View
Fragaria x ananassa FAN21G1013 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Fvb3-2 + View
Fragaria vesca FvH4_7g00670 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Fvb7 + View
Fragaria vesca FvH4_3g43280 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Fvb3 + View
Gossypium hirsutum Gohir.D09G122400 PF00010 - Helix-loop-helix DNA-binding domain (HLH) D09 + View
Glycine max Glyma.11G131200 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Gm11 - View
Glycine max Glyma.15G032700 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Gm15 - View
Glycine max Glyma.13G204400 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Gm13 + View
Glycine max Glyma.12G238700 KOG1318 - Helix loop helix transcription factor EB Gm12 + View
Glycine max Glyma.12G055400 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Gm12 - View
Glycine max Glyma.13G341700 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Gm13 + View
Helianthus annuus HanXRQChr02g0056251 Probable basic helix-loop-helix (bHLH) DNA-binding superfamily protein HanXRQChr02 + View
Lupinus albus Lalb_Chr24g0396981 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Lalb_Chr24 - View
Lotus japonicus Lj3g0005882 PF00010 - Helix-loop-helix DNA-binding domain (HLH) chr3 - View
Lotus japonicus Lj3g0007038 PF00010 - Helix-loop-helix DNA-binding domain (HLH) chr3 - View
Lotus japonicus Lj3g0016730 PF00010 - Helix-loop-helix DNA-binding domain (HLH) chr3 + View
Lonicera japonica Lj2A649T47 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_6_48561 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Lsat_1_v8_lg_6 + View
Lactuca sativa Lsat_1_v5_gn_2_101000 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Lsat_1_v8_lg_2 + View
Magnolia biondii MBI04_g14261_MAGBIO AED:0.08 Chr04 + View
Magnolia biondii MBI01_g36434_MAGBIO AED:0.11 Chr01 - View
Malus domestica MD11G1028100 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr11 - View
Malus domestica MD07G1006400 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr07 - View
Malus domestica MD03G1023200 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr03 - View
Malus domestica MD02G1315600 basic helix-loop-helix (bHLH) DNA-binding superfamily protein Chr02 + View
Manihot esculenta Manes.06G167700 Chromosome06 + View
Manihot esculenta Manes.14G013300 Chromosome14 - View
Manihot esculenta Manes.07G003800 Chromosome07 - View
Manihot esculenta Manes.09G031000 Chromosome09 + View
Medicago truncatula Medtr7g092540 transcription factor bHLH122-like protein chr7 + View
Medicago truncatula Medtr2g098310 transcription factor bHLH122-like protein chr2 + View
Nelumbo nucifera Nn2g15506 chr2 + View
Prunus persica Prupe.2G009100 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Pp02 - View
Prunus persica Prupe.6G022200 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Pp06 - View
Papaver somniferum PSO384G1452 NC_039368.1 + View
Populus trichocarpa Potri.009G064700 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Chr09 + View
Populus trichocarpa Potri.001G017300 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Chr01 - View
Populus trichocarpa Potri.001G270000 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Chr01 + View
Populus trichocarpa Potri.003G207200 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Chr03 + View
Phaseolus vulgaris Phvul.011G057400 PF00010 - Helix-loop-helix DNA-binding domain (HLH) Chr11 - View
Quercus lobata QL04p005185 4 - View
Quercus lobata QL01p005692 1 + View
Rosa chinensis RcHm_v2.0_Chr5g0077341 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim13G0224500 chr13 + View
Salvia bowleyana SalBow6G0493 GWHASIU00000002 + View
Salix brachista Sabra16G0165400 GWHAAZH00000016 + View
Salix brachista Sabra03G0152900 GWHAAZH00000003 + View
Salix brachista Sabra06G0040700 GWHAAZH00000006 + View
Salix brachista Sabra01G0012100 GWHAAZH00000001 - View
Sechium edule Sed0000512 LG05 - View
Solanum lycopersicum Solyc11g056650.2 bHLH transcription factor 096 SL4.0ch11 - View
Schrenkiella parvula Sp1g37890 PTHR16223:SF29 - TRANSCRIPTION FACTOR BHLH117-RELATED ch1-2 - View
Solanum pennellii Sopen11g023410 basic helix-loop-helix (bHLH) DNA-binding superfamily protein | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain , Helix-loop-helix DNA-binding | BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein Spenn-ch11 - View
Solanum tuberosum PGSC0003DMG400022058 DNA binding protein ST4.03ch11 - View
Selenicereus undatus Hund07542 Scaffold_33676 + View
Selenicereus undatus Hund19178 Scaffold_33673 + View
Trochodendron aralioides TAR623G0922 group7 - View
Theobroma cacao Thecc.05G166100 Chromosome_5 + View
Theobroma cacao Thecc.09G226600 Basic helix-loop-helix DNA-binding superfamily protein Chromosome_9 - View
Theobroma cacao Thecc.01G414200 Basic helix-loop-helix DNA-binding superfamily protein Chromosome_1 + View
Tarenaya hassleriana THA.LOC104826667 transcription factor bHLH130-like NW_010967707.1 - View
Tarenaya hassleriana THA.LOC104811150 transcription factor bHLH122 NW_010965304.1 + View
Tripterygium wilfordii TWI34G2012 NC_052235.1 + View
Tripterygium wilfordii TWI73G0436 NC_052232.1 + View
Vaccinium macrocarpon vmacro04179 Similar to BHLH130: Transcription factor bHLH130 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro13651 Similar to BHLH130: Transcription factor bHLH130 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1127G2181 CM024076.1 - View
Vigna mungo VMungo1127G1009 CM024076.1 + View
Vigna mungo VMungo1383G2359 CM024070.1 + View
Vitis vinifera GSVIVG01032055001 chr13 + View
Vitis vinifera GSVIVG01025313001 chr6 - View